| Organism |
Number of proteins |
Number of fragments |
Chopped proteins |
Single-domain Chopped proteins |
| Aeropyrum pernix K1 |
2692 |
3931 |
979(36%) |
270(27%) |
| Achaeoglobus fulgidus |
2394 |
4240 |
1583(66%) |
561(35%) |
| Halobacterium sp. (strain NRC-1) |
2058 |
3757 |
1295(62%) |
383(29%) |
| Methanosarcina acetivorans |
4532 |
8592 |
2611(57%) |
707(27%) |
| Methanococcus jannaschii |
1762 |
3142 |
1196(67%) |
430(35%) |
| Methanopyrus kandleri |
1683 |
2853 |
1019(60%) |
348(34%) |
| Methanobacterium thermoautotrophicum |
1862 |
3388 |
1249(67%) |
427(34%) |
| Pyrococcus abyssi |
1763 |
3273 |
1322(74%) |
451(34%) |
| Pyrococcus furiosus |
2061 |
3647 |
1401(67%) |
468(33%) |
| Pyrococcus horikoshii |
2063 |
3431 |
1163(56%) |
371(31%) |
| Sulfolobus solfataricus |
943 |
1568 |
571(60%) |
182(31%) |
| Sulfolobus tokodaii |
2826 |
4497 |
1520(53%) |
514(33%) |
| Thermoplasma acidophilum |
1475 |
2633 |
1003(68%) |
332(33%) |
| Thermoplasma volcanium |
1525 |
2686 |
1001(65%) |
316(31%) |
| Aquifex aeolicus |
1522 |
3039 |
1202(78%) |
397(33%) |
| Bacillus subtilis |
4093 |
7611 |
2632(64%) |
791(30%) |
| Bifidobacterium longum |
1728 |
3676 |
1260(72%) |
259(20%) |
| Borrelia burgdorferi |
850 |
1671 |
572(67%) |
168(29%) |
| Brucella melitensis |
2059 |
3980 |
1394(67%) |
363(26%) |
| Campylobacter jejuni |
1633 |
3001 |
1137(69%) |
382(33%) |
| Caulobacter crescentus |
3737 |
7117 |
2466(65%) |
653(26%) |
| Chlamydia pneumoniae |
1052 |
1938 |
632(60%) |
197(31%) |
| Chlorobium tepidum |
2251 |
4182 |
1407(62%) |
411(29%) |
| Chlamydia trachomatis |
894 |
1765 |
610(68%) |
183(30%) |
| Clostridium acetobutylicum |
3843 |
7350 |
2515(65%) |
669(26%) |
| Clostridium perfringens |
2723 |
5241 |
1869(68%) |
532(28%) |
| Deinococcus radiodurans |
3102 |
5883 |
1996(64%) |
488(24%) |
| Escherichia coli |
4280 |
8225 |
3044(71%) |
903(29%) |
| Fusobacterium nucleatum |
2058 |
3742 |
1320(64%) |
407(30%) |
| Haemophilus influenzae |
1708 |
3320 |
1312(76%) |
463(35%) |
| Helicobacter pylori |
1549 |
2803 |
1033(66%) |
341(33%) |
| Lactococcus lactis (subsp. lactis) |
2266 |
4153 |
1539(67%) |
484(31%) |
| Leptospira interrogans |
4726 |
7569 |
1978(41%) |
501(25%) |
| Listeria innocua |
2968 |
5454 |
2012(67%) |
638(31%) |
| Listeria monocytogenes |
2845 |
5402 |
2065(72%) |
669(32%) |
| Mycoplasma genitalium |
470 |
991 |
367(78%) |
107(29%) |
| Mycobacterium leprae |
1605 |
3346 |
1109(69%) |
254(22%) |
| Mycoplasma pneumoniae |
688 |
1386 |
484(70%) |
128(26%) |
| Mycobacterium tuberculosis |
4186 |
8233 |
2566(61%) |
568(22%) |
| Neisseria meningitidis |
2061 |
3688 |
1267(61%) |
386(30%) |
| Oceanobacillus iheyensis |
3491 |
6540 |
2407(68%) |
748(31%) |
| Pasteurella multocida |
2014 |
4057 |
1633(81%) |
556(34%) |
| Pseudomonas aeruginosa |
5562 |
11058 |
4032(72%) |
1107(27%) |
| Rickettsia conorii |
1374 |
2283 |
702(51%) |
241(34%) |
| Rickettsia prowazekii |
834 |
1678 |
642(76%) |
223(34%) |
| Staphylococcus aureus |
2622 |
4785 |
1752(66%) |
571(32%) |
| Streptomyces coelicolor |
7889 |
15121 |
4888(61%) |
980(20%) |
| Streptococcus pyogenes |
1845 |
3395 |
1230(66%) |
387(31%) |
| Synechococcus elongatus |
2473 |
4928 |
1688(68%) |
458(27%) |
| Synechocystis PCC6803 |
3166 |
6356 |
2123(67%) |
582(27%) |
| Thermotoga maritima |
1844 |
3608 |
1391(75%) |
440(31%) |
| Treponema pallidum |
1031 |
2104 |
693(67%) |
173(24%) |
| Ureaplasma urealyticum |
611 |
1129 |
380(62%) |
104(27%) |
| Vibrio cholerae |
2735 |
5521 |
1966(71%) |
561(28%) |
| Xanthomonas campestris (pv. citri) |
4312 |
8271 |
2819(65%) |
740(26%) |
| Xylella fastidiosa |
2766 |
4738 |
1389(50%) |
355(25%) |
| Arabidopsis thaliana |
25528 |
61241 |
16619(65%) |
1716(10%) |
| Caenorhabditis elegans |
20244 |
45427 |
11736(57%) |
1530(13%) |
| Drosophila melanogaster |
14314 |
33601 |
8310(58%) |
850(10%) |
| Saccharomyces cerevisiae |
6349 |
13334 |
3474(54%) |
466(13%) |
| Homo sapiens |
36750 |
93619 |
22733(61%) |
3098(13%) |
