# "long" alignment format (showing entire sequences)
# P-value, E-value : statistical significance of "bi-directional" scores (caution: too optimistic for highly significant values)
# P-frwd, E-frwd   : statistical significance of "forward" scores (generalized profile of a query against a database of generalized sequences)
# P-frwd, E-frwd   : statistical significance of "reversed" scores (generalized sequence of a query against a database of generalized profiles)
# query sequence   :
# MRRLNRKNNEALKKLNDRQRKVLYCIVREYIENKKPVSSQRVLEVSNIEFSSATIRNDMK
# KLEYLGYIYQPHTSAGRIPTDKGLRFYYEEMLKISKETSEADLAVETFKSMPLADPEKVL
# FLAGNLLARLTEGYVLIERPNTRDLKILRVMLIPVSEDYLIFSILTEFGVSKVTPIKTQE
# RLNWEEIERQLNFLLRGRTVGEVLMGKIESLKGSGFLRLIESLIGETVERYLDAGLENLL
# KDETLTLEDIRNLLEEVKDQKFLESLVGEGITVRIGREIGRKKLEKFAVFSGKYFKGESP
# IGSVYLFTSKVTKYDRNHRVFEYILNRLSEYFTSTSRR
#
>1jhf_A P-value=4.572e-08 E-value=1.173e-04 (P-frwd=1.084e-04 E-frwd=2.780e-01 P-rvsd=2.014e-05 E-rvsd=5.169e-02)
Query:   MRRLNRKNNEALKKLNDRQRKVLYCIVREYIENKKPVSSQRVLEVSNIEFSSATIRNDMKKLEYLGYIYQPHTSAGRIPTDKGLRFYYEEMLKISK-------ETSEADLAVETFKSMPLADPEKVLFLAGNLLARLTEGYVLIERPNTRDLKILRVMLIPVSEDYLIFSILTEFGVSKVTPIKTQERLNWEEIERQLNFLLRGRTVGEVLMGKIESLKGSGFLRLIESLIGETVERYLDAGLENLLKDETLTLEDIRNLLEEVKDQKFLESLVGEGITVRIGREIGRKKLEKFAVFSGKYFKGESPIGSVYLFTSKVTKYDRNHRVFEYILNRLSEYFTSTSRR-----------------------------
Sbjct:   ------------KALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFR-SPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAADEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHK-TQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLP-------------------------------------------------------------------------------------------------------------------------------------------------------------------ENSEFKPIVVDLRQQSFTIEGLAVGVIRN

>1bia P-value=2.183e-05 E-value=5.602e-02 (P-frwd=1.359e-03 E-frwd=3.485e+00 P-rvsd=1.116e-03 E-rvsd=2.863e+00)
Query:   -MRRLNRKNNEALKKLNDRQRKVLYCIVREYIENKKPVSSQRVLEVSNIEFSSATIRNDMKKLEYLGYIYQPHTSAG----RIPTDKGLRFYYEEMLK--------ISKETSEADLAVETFK----------------------------SMPLADPEKVLFLA---GNLLARLTEGYVLIERPN---TRDLKILRVMLIPVSEDYLIFSILTEFGVSKVTPIKTQERLNWEE-IERQLNFLLRGRTVGEVLMGKIESLKGSGFLRLIESLIGETVERYLDAGLENLLKDETLTLEDIRNLLEEVKDQKFLESLVGEGITVRIGREIGRKKLEKFAVFSGKYFKGESPIGSVYLFTSKVTKYDRNHRVFEYILNRLSEYFTSTSRR-------------------------------------------------
Sbjct:   M-------------KDNTVPLKLI-----ALLANGEFHSGEQLGETLGM--SRAAINKHIQTLRDWGVDVFTVPGKGYSLPEPIQLLNAKQILGQLDGGSVAVLPVIDSTNQYLLDRIGELKSGDACIAEYQQAGSPFGANLYLSMFWRLEQPAAAIGLSLVIGIVMAEVLRKLGADKVRVKWPNDLYLQDRKLAGILVELTGAAQIVIGAGINMAMW-ITLQEAGINLDRNTLAAMLIREL-------RAALELFEQEGLAPYLSRWEKL-------------------------------------------------------------------------------------------------------------------DNFINRPVKLIIGDKEIFGISRGIDKQGALLLEQDGIIKPWMGGEISLR

>1mzb_A P-value=3.129e-05 E-value=8.029e-02 (P-frwd=8.533e-03 E-frwd=2.189e+01 P-rvsd=2.617e-04 E-rvsd=6.716e-01)
Query:   --MRRLNRKNNEALKKLNDRQRKVLYCIVREYIENKKPVSSQ---RVLEVSNIEFSSATIRNDMKKLEYLGYIYQPHTSAGRIPTDKGLRFYYEEMLKISKETSEADLAVETFKSMPLADPEKVLFLAGNLLARLTEGYVLIERPNTRDLKILRVMLIPVSEDYLIFSILTEFGVSKVTPIKTQERLNWEEIERQLNFLLRGRTVGEVLMGKIESLKGSGFLRLIESLIGETVERYLDAGLENLLKDETLTLEDIRNLLEEVKDQKFLESLVGEGITVRIGREIGRKKLEKFAVFSGKYFKGESPIGSVYLFTSKVTKYDRNHRVFEYILNRLSEYFTSTSRR----------------------------------------------------------
Sbjct:   MV-------ENSELRKAGLKVTLPRVKILQMLDSAQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNLVLYVRKKK

>1f9n_B P-value=2.626e-04 E-value=6.738e-01 (P-frwd=1.803e-02 E-frwd=4.625e+01 P-rvsd=1.244e-03 E-rvsd=3.193e+00)
Query:   -MRRLNRKNNEALKKLNDRQRKVLYCIVREYIENKKPVSSQRV---LEVSNIEFSSATIRNDMKKLE------YLGYIYQPHTSAGRIPTDKGLRFYYEEMLKISKETSEADLAVETFKSMPLADPEKVLFLAGNLLARLTEGYVLIERPNTRDLKILRVMLIPVSEDYLIFSILTEFGVSKVTPIKTQERLNWEEIERQLNFLLRGRTVGEVLMGKIESLKGSGFLRLIESLIGETVERYLDAGLENLLKDETLTLEDIRNLLEEVKDQKFLESLVGEGITVRIGREIGRKKLEKFAVFSGKYFKGESPIGSVYLFTSKVTKYDRNHRVFEYILNRLSEYFTSTSRR------------------
Sbjct:   M-------------NKGQRHIK-----IREIITSNEIETQDELVDMLKQDGYKVTQATVSRDIKELHLVKVPTNNGSYKYSLPADQRFNPLSKLKRALMDAFVKIDSASHMIV----LKTMPGN-----AQAIGALMDNLDWDEMMGTICGDDTILII----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CRTPEDTEGVKNRLLELL

>1q1h_A P-value=2.635e-04 E-value=6.761e-01 (P-frwd=8.120e-03 E-frwd=2.083e+01 P-rvsd=2.773e-03 E-rvsd=7.116e+00)
Query:   --MRRLNRKNNEALKKLNDRQRKVLYCIVREYIENKKPVSSQRVLEVSNIEFSSATIRNDMKKLEYLGYIYQPHTSAGRIPTDKGLRFYYEEMLKISKETSEADLAVETFKSMPLADPEKVLFLAGNLLARLTEGYVLIERPNTRDLKILRVMLIPVSEDYLIFSILTEFGVSKVTPIKTQERLNWEEIERQLNFLLRGRTVGEVLMGKIESLKGSGFLRLIESLIGETVERYLDAGLENLLKDETLTLEDIRNLLEEVKDQKFLESLVGEGITVRIGREIGRKKLEKFAVFSGKYFKGESPIGSVYLFTSKVTKYDRNHRVFEYILNRLSEYFTSTSRR-------------
Sbjct:   MV-----NAEDLFINLAKSLLGDDVIDVLRILLDKGTEMTDEEIANQLNI--KVNDVRKKLNLLEEQGFVSYRKTRSGW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FIYYWKPNIDQIN