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Transmembrane helices for yeast (Saccharomyces cerevisiae)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
195YNL318C9in28|ali|phd|phdHtm|54021-2.1275,137,166,194,263,397,426,458,514MTAQIPYQHSSGYISHFHNN
196YOL075C9in18|ali|phd|phdHtm|129460-6.68484,511,562,623,1060,1136,1158,1195,1285MSQQENGDVATELIENRLSF
197YLR378C9in13|ali|phd|phdHtm|48092-9.0352,96,137,166,196,262,306,378,448MSSNRVLDLFKPFESFLPEV
198YBR283C9in9|ali|phd|phdHtm|49081-8.1151,99,139,167,195,265,311,382,453MSGFRLIDIVKPILPILPEV
199YDR338C9in3|ali|phd|phdHtm|69540-4.07252,329,398,427,489,511,550,625,647MAGILSKTLSEVHPSLRTNG
200YLR138W9in3|ali|phd|phdHtm|98540-4.9033,91,132,226,264,314,345,382,434MAIWEQLEVSKAHVAYACVG
201YOR092W9in3|ali|phd|phdHtm|61310-1.9232,58,94,162,447,493,528,565,604MTHITLGQAIWASVRPIIKI
202YBR180W9in2|ali|phd|phdHtm|57280-8.46129,167,205,227,260,289,477,536,560MGSEPFQKKNLGLQINSQES
203YJL193W9in2|ali|phd|phdHtm|40222-2.9732,60,127,153,184,223,290,341,379MFQQLSASIRHNAHIIFLCI
204YNL095C9in2|ali|phd|phdHtm|64250-5.0932,57,94,163,476,524,556,595,633MVHITLGQAIWVSVKPIIKI
205YAL022C9in1|ali|phd|phdHtm|51740-4.2296,133,179,236,263,362,431,466,512MSTSADTDTIKKPILAVPEP
206YBR287W9in1|ali|phd|phdHtm|42729-2.2731,66,90,168,272,310,353,376,417MVETFSFAHLAYLVFESVLQ
207YCR023C9in1|ali|phd|phdHtm|61120-2.92113,171,214,373,437,462,490,532,561MARQKLTFKEQMDGFPWVQL
208YCR028C9in1|ali|phd|phdHtm|51240-4.1648,96,120,217,333,360,393,424,454MMKESKSITQHEVERESVSS
209YDL231C9in1|ali|phd|phdHtm|112520-2.36165,217,253,275,305,487,773,800,859MKRYERDRSPTPDPDIVKGS
210YDR438W9in1|ali|phd|phdHtm|37022-2.1430,63,143,167,189,222,261,302,346MNRVGIDVDHMIGVLLLAVV
211YJL062W9in1|ali|phd|phdHtm|83010-1.2827,427,455,494,566,618,742,795,819MNLKQFTCLSCAQLLAILLF
212YJR001W9in1|ali|phd|phdHtm|60240-4.70227,251,307,345,367,485,541,565,599MPEQEPLSPNGRKRSEVHYI
213YJR152W9in1|ali|phd|phdHtm|54370-7.24101,173,197,237,268,381,407,440,501MSADASTNSNASLDEKNLNI
214YLL055W9in1|ali|phd|phdHtm|53150-5.4073,150,172,211,235,345,370,401,465MSKVDVKIGADSISSSDEIL
215YGL012W9out12|ali|phd|phdHtm|47301-0.4162,119,165,190,251,276,313,345,436MAKDNSEKLQVQGEEKKSKQ
216YOR291W9out12|ali|phd|phdHtm|147200-0.16339,521,714,750,1258,1289,1331,1406,1439MDIPSSNQIQHGQRSERNRR
217YNL280C9out11|ali|phd|phdHtm|438010.2037,88,131,162,237,261,298,327,400MVSALNPRTTEFEFGGLIGA
218YLR092W9out7|ali|phd|phdHtm|893202.43157,188,251,273,325,369,427,555,577MSREGYPNFEEVEIPDFQET
219YCL069W9out6|ali|phd|phdHtm|45802-0.5459,85,146,180,228,268,294,324,436MNMLIVGRVVASVGGSGLQT
220YPL221W9out6|ali|phd|phdHtm|793707.20187,214,341,388,419,479,507,537,572MQVLVTLWCLICTCLVLPVA
221YGL139W9out4|ali|phd|phdHtm|802818.28193,220,346,395,424,483,513,543,577MRFLQVYKSSALIGLIILLA
222YAL053W9out3|ali|phd|phdHtm|783818.73204,231,370,420,449,510,537,570,602MIFLNTFARCLLTCFVLCSG
223YCR048W9out3|ali|phd|phdHtm|610000.31204,250,287,309,390,424,474,556,607MTETKDLLQDEEFLKIRRLN
224YDR107C9out3|ali|phd|phdHtm|672212.89329,397,424,466,494,556,583,623,656MKRGVWLLIYCYATLTKGFS
225YGL142C9out3|ali|phd|phdHtm|616000.3132,91,154,220,266,303,355,390,446MAHEVHRIKPKLGRTQIFWV
226YLR083C9out3|ali|phd|phdHtm|667313.87323,392,420,462,489,549,577,618,652MIYKMAHVQLLLLYFFVSTV
227YOR071C9out3|ali|phd|phdHtm|598303.6494,132,192,215,295,348,391,414,501MSFSSIVSKFLRYLEIPAKN
228YBR036C9out2|ali|phd|phdHtm|410717.7871,157,187,216,264,304,343,373,398MSTTLLWFSSVIGYVIQTKC
229YGR125W9out2|ali|phd|phdHtm|1036191.12226,260,323,355,399,428,491,571,626MGRTIRRRRSNSSLSEAISV
230YLR152C9out2|ali|phd|phdHtm|5769010.3829,61,92,119,162,417,463,495,566MSLSLGAAIYIALKPIFKIY
231YMR173W-A9out2|ali|phd|phdHtm|39400-0.4539,61,130,169,234,262,288,360,388MTTTPTTTTHMVLITTIHMV
232YEL004W9out1|ali|phd|phdHtm|342808.1249,86,115,143,188,223,270,298,322MWNSLKAFALVFGGCCSNVI
233YER113C9out1|ali|phd|phdHtm|706808.20313,383,425,478,514,574,613,680,702MRVRPKRSVITLMAIVVVML
234YGR055W9out1|ali|phd|phdHtm|574313.0689,111,163,201,224,271,311,360,514MSEGRTFLSQLNVFNKENYQ
235YGR157W9out1|ali|phd|phdHtm|869303.3379,104,210,232,379,405,460,483,560MSSCKTTLSEMVGSVTKDRG
236YIL166C9out1|ali|phd|phdHtm|542000.4097,166,226,258,344,377,408,434,502MSVQKEEYDIVEKAQLSVSA
237YMR221C9out1|ali|phd|phdHtm|504212.8234,81,110,140,203,321,365,408,481MTSTRTLRYAQVACACIWCL
238YMR253C9out1|ali|phd|phdHtm|414303.2486,126,182,218,265,291,326,356,378MNPSVPKVMKRENNTHLLVS
239YPL092W9out1|ali|phd|phdHtm|458121.0735,66,110,150,199,239,263,325,407MVANWVLALTRQFDPFMFMM
240YML075C8in70|ali|phd|phdHtm|105460-6.6344,208,240,268,327,354,520,1012MPPLFKGLKQMAKPIAYVSR
241YGL008C8in68|ali|phd|phdHtm|91820-2.91139,161,311,344,727,775,841,871MTDTSSSSSSSSASSVSAHQ
242YPL036W8in68|ali|phd|phdHtm|94730-3.81168,190,339,374,750,804,870,899MSSTEAKQYKEKPSKEYLHA
243YGL006W8in56|ali|phd|phdHtm|117340-4.30131,173,363,402,919,995,1083,1117MSRQDENSALLANNENNKPS
244YNR041C8in7|ali|phd|phdHtm|37222-2.27112,134,200,233,255,307,329,368MFIWQRKSILLGRSILGSGR
245YJL129C8in6|ali|phd|phdHtm|123590-9.8068,127,797,870,927,988,1098,1126MHFRRTMSRVPTLASLEIRY
246YKR050W8in6|ali|phd|phdHtm|88990-9.4071,130,483,557,616,675,764,791MPTAKRTSSRASLALPFQLR
247YBR029C8in5|ali|phd|phdHtm|45791-11.5591,113,136,178,208,234,276,347MSDNPEMKPHGTSKEIVESV
248YHR123W8in5|ali|phd|phdHtm|39173-7.0763,156,194,234,285,308,338,368MGYFVPDSHIENLKSYKYQS
249YNL130C8in5|ali|phd|phdHtm|38683-8.0256,147,189,228,284,306,330,364MRIARIVKHLYQSDDRSFLS
250YHR032W8in4|ali|phd|phdHtm|58150-5.48188,266,335,366,417,454,493,570MSKQFSHTTNDRRSSIIYST
251YOR088W8in4|ali|phd|phdHtm|48270-7.5462,100,125,175,197,234,263,343MDMERMDSPKWLGSHNFYQG
252YDR072C8in2|ali|phd|phdHtm|52771-7.8447,119,171,208,240,310,452,484MNVIFSLASFVKNMYNASLN
253YBR086C8in1|ali|phd|phdHtm|94671-7.78146,174,236,271,324,471,530,583MSQTITSLDPNCVIVFNKTS
254YDR040C8in1|ali|phd|phdHtm|109120-2.1298,303,341,866,910,963,1009,1042MGEGTTKENNNAEFNAYHTL
255YER141W8in1|ali|phd|phdHtm|48680-8.62106,188,218,262,312,387,426,448MLFRNIEVGRQAAKLLTRTS
256YFL025C8in1|ali|phd|phdHtm|102960-6.9573,723,766,832,896,941,973,1017MGIRRLVSVITRPIINKVNS
257YGR149W8in1|ali|phd|phdHtm|43241-4.67130,153,190,212,239,282,335,357MYKLDNNDIDDETNNSVSLT
258YJR013W8in1|ali|phd|phdHtm|30530-3.8234,56,82,121,183,205,228,286MKLLNQAISRKRALILESIW
259YKL217W8in1|ali|phd|phdHtm|61640-4.05163,198,286,315,380,423,479,554MSSSITDEKISGEQQQPAGR
260YMR155W8in1|ali|phd|phdHtm|54740-4.5477,104,127,194,339,413,455,533MVKKHQNSKMGNTNHFGHLK
261YNR062C8in1|ali|phd|phdHtm|32762-6.9337,70,125,158,218,261,301,323MSIAQDRGIVFKLLSIYRAA
262YPL244C8in1|ali|phd|phdHtm|33951-5.2725,62,133,155,234,268,297,321MAGSTSSLVICAIGIYATFL
263YBR298C8out9|ali|phd|phdHtm|614202.99203,227,294,418,445,480,514,545MKGLSSLINRKKDRNDSHLD
264YBR294W8out5|ali|phd|phdHtm|859101.68142,185,236,258,314,352,412,548MSRKSSTEYVHNQEDADIEV
265YGR289C8out5|ali|phd|phdHtm|616202.97208,232,300,424,451,486,520,551MKNIISLVSKKKAASKNEDK
266YJR160C8out4|ali|phd|phdHtm|602292.31201,226,292,417,444,479,513,544MKNLSFLINRRKENTSDSNV
267YNR019W8out3|ali|phd|phdHtm|642010.51234,278,312,335,457,505,588,639MDKKKDLLENEQFLRIQKLN
268YPL172C8out3|ali|phd|phdHtm|481010.68188,211,274,311,335,391,413,459FARNESYLTRANSFERASEM
269YDR456W8out2|ali|phd|phdHtm|633303.2878,108,176,279,330,367,397,477MLSKVLLNIAFKVLLTTAKR
270YJL134W8out2|ali|phd|phdHtm|409303.11104,126,179,203,233,262,337,403MVDGLNTSNIRKRARTLSNP
271YKL100C8out2|ali|phd|phdHtm|587303.5399,182,211,322,373,423,467,493MDKYLNSFVDHLSEWSSRAF
272YKR053C8out2|ali|phd|phdHtm|404101.30104,128,180,204,233,261,335,396MTIIQTVTELGVTEDTIKVQ
273YNR030W8out2|ali|phd|phdHtm|551202.8078,160,183,213,241,326,349,383MRWSVLDTVLLTVISFHLIQ
274YOR390W8out2|ali|phd|phdHtm|375414.0866,100,145,229,261,288,329,361MIFNPVISNHKLSHYIHVFC
275YPL279C8out2|ali|phd|phdHtm|375414.2366,100,145,230,261,288,330,362MIFNPVISNHKLSHYIHVFC
276YBR097W8unk1|ali|phd|phdHtm|1454000.00MGAQLSLVVQASPSIAIFSY
277YBR220C8out1|ali|phd|phdHtm|56001-0.9639,110,154,194,235,403,440,541MEPKRKSGSLAKHDLPQFYL
278YGR168C8out1|ali|phd|phdHtm|376202.2454,95,137,175,209,332,354,376MKHNRPNGTGKAVSGFKQII
279YKL034W8out1|ali|phd|phdHtm|758505.8822,416,454,480,547,573,624,655MEIDGNTLVFIIVILFLFFS
280YLR214W8out1|ali|phd|phdHtm|686101.70168,232,276,313,347,379,401,546MVRTRVLFCLFISFFATVQS
281YLR459W8out1|ali|phd|phdHtm|394626.0192,140,179,212,261,296,329,370MDSTALKVALGCIAIRLAVN
282YMR274C8out1|ali|phd|phdHtm|315010.8318,62,92,124,167,229,255,297MLQFSTFLVLLYISISYVLP
283YNL219C8out1|ali|phd|phdHtm|555404.32106,132,154,198,231,300,339,370MNCKAVTISLLLLLFLTRVY
284YOR079C8out1|ali|phd|phdHtm|313414.8024,87,120,170,204,238,267,311MKFLGVILLASFLLIATFLI
285YLR450W7in69|ali|phd|phdHtm|104530-3.0245,208,237,267,323,353,1008MSLPLKTIVHLVKPFACTAR
286YDR270W7in56|ali|phd|phdHtm|100420-2.86277,319,356,547,590,929,951MREVILAVHGMTCSACTNTI
287YKL083W7in6|ali|phd|phdHtm|20490-10.8526,49,78,119,141,163,193MRWYIYRYIYIYMYLYIYVH
288YHL003C7in4|ali|phd|phdHtm|41132-3.57100,153,196,234,282,323,375MTSATDKSIDRLVVNAKTRR
289YDR492W7in3|ali|phd|phdHtm|31644-4.04101,136,175,200,236,265,303MSITTTRRRNQDSVCCKATR
290YKL008C7in3|ali|phd|phdHtm|41832-3.4398,155,197,236,282,323,375MSTIKPSPSNNNLKVRSRPR
291YGR284C7in2|ali|phd|phdHtm|31021-2.3185,128,156,178,232,261,298MSYRGPIGNFGGMPMSSSQG
292YLL051C7in2|ali|phd|phdHtm|71200-0.52189,261,305,341,381,404,433MHRTLLFLTWLISLTKAFNI
293YOL002C7in2|ali|phd|phdHtm|32734-3.90110,145,182,206,244,270,311MLHVGEESFQMSTLLERTKS
294YPL076W7in2|ali|phd|phdHtm|28053-5.3678,100,128,157,185,208,248MTRSPWKRLLWLKQEYPDNY
num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
295YDL180W7in1|ali|phd|phdHtm|54742-4.3638,87,109,157,356,410,543MVRLNHAASYFMPIFCSTRP
296YDR307W7in1|ali|phd|phdHtm|66210-1.1646,128,177,210,254,586,636MKDLRLQGPYRKYIPYNIFQ
297YGL126W7in1|ali|phd|phdHtm|38091-11.2529,68,112,253,319,341,372MSSKWFNAIHLLVCPLTVLV
298YHR078W7in1|ali|phd|phdHtm|55211-1.36105,143,178,217,342,427,539MEALIVFIVLSVSGAFAYKC
299YIL047C7in1|ali|phd|phdHtm|90231-3.73421,461,515,541,595,753,779MKFADHLTESAIPEWRDKYI
300YLR023C7in1|ali|phd|phdHtm|54320-2.68278,314,347,371,415,442,529MMDSSSKSLTQYIPSPMGSL
301YLR088W7in1|ali|phd|phdHtm|61410-1.1139,376,409,433,479,555,598MALLEKLHRRIVDMGLVPRI
302YOL101C7in1|ali|phd|phdHtm|31273-7.5088,121,173,195,220,254,296MVSLTTIEQSPVKCETTTEK
303YOL152W7in1|ali|phd|phdHtm|62910-1.6263,135,179,214,261,283,311MIEERDLVLSNGIHCIADIH
304YOR270C7in1|ali|phd|phdHtm|84010-1.44433,477,559,591,652,760,787MAEKEEAIFRSAEMALVQFY
305YGL167C7out170|ali|phd|phdHtm|950202.49123,312,335,769,832,899,928MSDNPFNASLLDEDSNRERE
306YNL192W7out116|ali|phd|phdHtm|1146000.97832,867,900,945,971,1075,1135CHITINSYNTHASEIMSDQN
307YBR038W7out114|ali|phd|phdHtm|979202.68678,711,746,781,807,908,943CHITINSYNTHASEIIMTRN
308YLL043W7out30|ali|phd|phdHtm|669101.85275,343,366,390,444,473,527MSNPQKALNDFLSSESVHTH
309YBL040C7out10|ali|phd|phdHtm|219404.3926,52,77,113,137,173,204MNPFRILGDLSHLTSILILI
310YDL247W7out5|ali|phd|phdHtm|609000.21200,292,417,444,479,513,545MKNLSFLINRRKENTSDSNV
311YEL031W7out5|ali|phd|phdHtm|1215000.0377,224,418,1008,1074,1155,1190MTKKSFVSSPIVRDSTLLVP
312YCR034W7out4|ali|phd|phdHtm|3479018.7387,121,167,196,220,253,294MNSLVTQYAAPLFERYPQLH
313YIL023C7out4|ali|phd|phdHtm|346313.1787,116,146,221,264,306,342MKASHICSYLLSIAPLVVSH
314YLR372W7out4|ali|phd|phdHtm|3459017.0592,130,174,203,227,260,302MNTTTSTVIAAVADQFQSLN
315YBR207W7out3|ali|phd|phdHtm|4659116.8430,155,190,248,289,311,392MAFEDYFSFQIFFIFLRKSL
316YDR033W7out3|ali|phd|phdHtm|320343.2955,84,138,160,186,222,259MSTFETLIKRGGNEAIKINP
317YER185W7out3|ali|phd|phdHtm|303848.2037,95,133,167,208,246,288MSTTDSGFVLYHYTPSKAAA
318YJL196C7out3|ali|phd|phdHtm|3109018.6880,119,161,191,216,248,291MVSDWKNFCLEKASRFRPTI
319YKL039W7out3|ali|phd|phdHtm|531606.41215,247,290,325,353,399,440MRVYQFCRPFQLFTCFLCYL
320YBR054W7out2|ali|phd|phdHtm|344232.8654,84,135,161,187,222,259MSDYVELLKRGGNEAIKINP
321YBR147W7out2|ali|phd|phdHtm|296505.0533,74,96,190,226,249,278MKLIPIILNAKNLSGMAGSI
322YER145C7out2|ali|phd|phdHtm|4049220.7629,73,107,162,204,227,311MPNKVFNVAVFFVVFRECLE
323YFL026W7out2|ali|phd|phdHtm|4319214.5271,100,148,184,229,264,295MSDAAPSLSNLFYDPTYNPG
324YGR213C7out2|ali|phd|phdHtm|317555.4035,82,121,155,196,235,276MAKDGFELYRYTPELGASIL
325YHL017W7out2|ali|phd|phdHtm|532707.01211,243,287,321,350,396,437MDRTWLLLTWLLLLCGVVQG
326YHR142W7out2|ali|phd|phdHtm|316525.4985,115,151,188,224,253,286MAFSDFAAICSKTPLPLCSV
327YKL004W7out2|ali|phd|phdHtm|401020.6673,102,175,197,269,293,315MANPFSRWFLSERPPNCHVA
328YLR130C7out2|ali|phd|phdHtm|422222.8845,77,116,282,347,379,421MVDLIARDDSVDTCQASNGY
329YOL092W7out2|ali|phd|phdHtm|3089310.3034,62,84,184,230,263,295MQLVPLELNRSTLSGISGSI
330YPL087W7out2|ali|phd|phdHtm|3179011.7258,87,115,160,182,217,260MLFSWPYPEAPIEGYWGKPT
331YBL004W7unk1|ali|phd|phdHtm|2493000.00MAKQRQTTKSSKRYRYSSFK
332YBR183W7out1|ali|phd|phdHtm|3169011.5059,89,115,155,178,218,261MGIFRWNYPESSVPGVWGET
333YCR021C7out1|ali|phd|phdHtm|332131.5754,87,135,177,202,232,269MNDTLSSFLNRNEALGLNPP
334YCR044C7out1|ali|phd|phdHtm|3579215.84130,173,213,235,263,309,344MRLAVVVTLLVHCFLVTCSP
335YCR061W7out1|ali|phd|phdHtm|58300-0.72122,149,187,340,373,429,538MVRFVSILSLFGCAATLVTA
336YDR090C7out1|ali|phd|phdHtm|310737.9827,59,91,117,149,179,210MISEKAATALATIATVCWCV
337YDR352W7out1|ali|phd|phdHtm|317333.3332,62,85,162,202,235,276MSCSNGIWPTVSNLCGSLSF
338YDR414C7out1|ali|phd|phdHtm|362404.1243,102,129,202,237,316,354MEKSESNSEGLYLQNILNVP
339YER140W7out1|ali|phd|phdHtm|556909.27107,168,245,267,346,411,446MQHKDTAVAKDTAKKRLLRR
340YGL160W7out1|ali|phd|phdHtm|570404.8141,87,157,194,223,251,392MKESPLITLVKRHSETHFAN
341YGL255W7out1|ali|phd|phdHtm|376525.3569,102,145,238,303,334,376MSNVTTPWWKQWDPSEVTLA
342YGR026W7out1|ali|phd|phdHtm|278303.3260,101,142,164,197,222,244MAKTIKVIRKKDPKKKNLSD
343YGR101W7out1|ali|phd|phdHtm|346404.13127,162,216,241,286,308,330MSGVSSVMLGLRPATRIFFR
344YJR116W7out1|ali|phd|phdHtm|2799114.9853,93,135,158,182,222,260MNANSTTTAIGLTSPFEKLS
345YJR117W7out1|ali|phd|phdHtm|453303.3730,93,139,186,219,329,378MFDLKTILDHPNIPWKLIIS
346YKL178C7out1|ali|phd|phdHtm|470626.6725,49,94,134,180,224,280MSYKSAIIGLCLLAVILLAP
347YKR051W7out1|ali|phd|phdHtm|418626.5230,62,98,162,187,223,265MENKLLCWWLYWPCVYSSII
348YLR047C7out1|ali|phd|phdHtm|686404.3854,108,173,208,236,260,423MNLKSIVSWFKEHLPSFDVD
349YMR010W7out1|ali|phd|phdHtm|405131.1569,100,122,199,242,277,324MSTTGPLDATLIRDVAVATA
350YNL008C7out1|ali|phd|phdHtm|6699013.0993,133,170,194,231,255,286MLSNCSITRDVFSFFHNKTG
351YNL275W7out1|ali|phd|phdHtm|576212.13153,189,215,258,347,465,534MSNESTRVTVSRGCTASDEC
352YOL107W7out1|ali|phd|phdHtm|342202.4245,106,142,173,218,240,292MQYSSRFLELNIPDSFLNIN
353YOR030W7out1|ali|phd|phdHtm|619505.45184,220,269,312,345,400,427MIIRLHFYYLLTLVYHLGLV
354YOR049C7out1|ali|phd|phdHtm|354939.6029,51,83,122,170,234,274MVPNLRFNITMIVIWGILLT

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