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Transmembrane helices for yeast (Saccharomyces cerevisiae)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
355YMR301C6in80|ali|phd|phdHtm|69040-4.94130,170,255,277,364,388MLLLPRCPVIGRIVRSKFRS
356YFL054C6in59|ali|phd|phdHtm|64640-4.41368,400,441,500,532,587MSYESGRSSSSSESTRPPTL
357YPR192W6in38|ali|phd|phdHtm|30542-4.9469,112,145,196,226,270MSSNDSNDTDKQHTRLDPTG
358YCR011C6in28|ali|phd|phdHtm|104980-8.22814,848,897,925,955,1039MGSHRRYLYYSILSFLLLSC
359YMR243C6in17|ali|phd|phdHtm|44242-4.3131,56,96,130,260,284MITGKELRIISLLTLDTVFF
360YOR316C6in15|ali|phd|phdHtm|43942-4.8532,58,97,131,269,295MKLGSKQVKIISLLLLDTVF
361YBR295W6in10|ali|phd|phdHtm|121620-2.83579,608,645,830,871,1194MKPEKLFSGLGTSDGEYGVV
362YDL142C6in7|ali|phd|phdHtm|28370-7.5696,118,145,167,229,271MIQMVPIYSCSALLRRTIPK
363YDR536W6in4|ali|phd|phdHtm|56920-2.17130,195,223,348,409,461MKDLKLSNFKGKFISRTSHW
364YHL008C6in4|ali|phd|phdHtm|62761-6.8150,87,134,186,215,259MVDDSNYLTPHETALAVVAT
365YKL220C6in3|ali|phd|phdHtm|71130-3.95184,253,297,373,395,426MHWTSILSAILLFCLSGARA
366YLR046C6in3|ali|phd|phdHtm|27085-8.5551,88,120,163,202,243MATHTSKRRIHRWENNELSE
367YLR064W6in3|ali|phd|phdHtm|27314-1.6747,71,122,151,194,221MTVPRNRPMAPFGTIIKSRI
368YAL067C6in2|ali|phd|phdHtm|59340-4.95248,319,433,455,485,553MYSIVKEIIVDPYKRLKWGF
369YDR302W6in2|ali|phd|phdHtm|21991-15.0472,94,134,158,183,218MPAKKRTRKTVKKTVSFSDD
370YDR411C6in2|ali|phd|phdHtm|34191-10.2859,82,142,164,195,217MAGPRNVRTLHGNGGRNNDV
371YGR197C6in2|ali|phd|phdHtm|54740-4.71130,339,380,412,443,504MTKSVGDEESQYIEDPSFAA
372YJR015W6in2|ali|phd|phdHtm|51070-7.29110,327,368,400,431,492MTSSLDDIEPTAYNNMEADE
373YCR075C6in1|ali|phd|phdHtm|26032-3.0857,101,138,169,207,244MVSLDDILGIVYVTSWSISM
374YFR042W6in1|ali|phd|phdHtm|20093-18.1437,64,95,122,162,193MAGIKLTHKLYQYYQLATSF
375YGR216C6in1|ali|phd|phdHtm|60941-4.45203,298,361,401,475,503MPNYIFWPYESLFENSAAQG
376YHR140W6in1|ali|phd|phdHtm|23990-15.0034,64,115,149,181,219MMSCLVPTRFTLTLNTACLL
377YIL067C6in1|ali|phd|phdHtm|67830-3.82137,339,393,465,495,536MGVHFDDNANTTWEATDPGV
378YKL051W6in1|ali|phd|phdHtm|35343-4.1732,82,154,183,254,284MIQFKSPGNWLFIVPWIAFI
379YKR088C6in1|ali|phd|phdHtm|33723-2.17115,157,193,246,268,307MSQSYEAGNANMGQGEDDEF
380YLR446W6in1|ali|phd|phdHtm|43320-2.1786,115,207,278,368,390MTIESTLARELESLILPADS
381YML019W6in1|ali|phd|phdHtm|33251-5.1320,184,206,235,287,321MKWCSTYIIIWLAIIFHKFQ
382YNR039C6in1|ali|phd|phdHtm|60571-7.37248,276,321,384,421,445METPQMNAIQEEDNLSPEVA
383YOL162W6in1|ali|phd|phdHtm|21530-3.0725,47,79,107,140,175MGLLAYIPTNVLATYLTLVL
384YOR085W6in1|ali|phd|phdHtm|35090-9.8021,73,205,236,290,334MNWLFLVSLVFFCGVSTHPA
385YOR311C6in1|ali|phd|phdHtm|29010-1.8496,122,172,221,262,287MGTEDAIALPNSTLEPRTEA
386YPL246C6in1|ali|phd|phdHtm|26210-1.7435,78,112,134,177,199MNWKSYVFPGGHPPAALTTG
387YDR038C6out67|ali|phd|phdHtm|1091202.2799,308,330,914,1011,1040MSEGTVKENNNEEFNAYHTL
388YBR023C6out17|ali|phd|phdHtm|1182303.75203,240,489,1061,1094,1117CHITINSYNTHASEIIIMTG
389YMR054W6out13|ali|phd|phdHtm|890606.19482,524,602,637,697,852MNQEEAIFRSADMTYVQLYI
390YEL006W6out10|ali|phd|phdHtm|335212.3661,123,158,219,265,325MNNGDNKTTLENSKNASLAN
391YIL006W6out9|ali|phd|phdHtm|373000.83101,161,199,257,301,360MTQTDNPVPNCGLLPEQQYC
392YBR187W6out5|ali|phd|phdHtm|2809311.2765,93,118,204,245,271MGNMIKKASLIALLPLFTAA
393YNR002C6out4|ali|phd|phdHtm|282131.23109,135,167,213,235,258MSDREQSSGNTAFENPKALD
394YDR384C6out3|ali|phd|phdHtm|275131.60106,136,164,210,232,255MTSSASSPQDLEKGVNTLEN
395YER039C6out3|ali|phd|phdHtm|249343.4934,58,107,142,176,228MIYTSSKSLQYLAVPIYTIF
396YFL013W-A6out2|ali|phd|phdHtm|267111.0128,101,143,165,187,248MFLNVCMCVCVCVRIVLFHS
397YNR060W6out2|ali|phd|phdHtm|719313.73177,246,289,368,390,417MLLVHIISFLLFFQLSAAKA
398YOR381W6out2|ali|phd|phdHtm|711101.43184,253,298,377,399,425MYWVLLCGSILLCCLSGASA
399YOR384W6out2|ali|phd|phdHtm|69401-0.93182,248,291,370,392,421MLFARLVLLLVYLAPGSLAK
400YAL002W6unk1|ali|phd|phdHtm|1176000.00MGTSKGCVLIFNYNEHLQTI
401YBR168W6out1|ali|phd|phdHtm|413101.0057,86,122,202,224,246MDTNSKTKVQTENKKIKAKF
402YDL035C6out1|ali|phd|phdHtm|9619017.7173,117,153,199,270,641MITEGFPPNLNALKGSSLLE
403YDL149W6out1|ali|phd|phdHtm|997404.31340,391,557,642,672,744MERDEYQLPNSHGKNTFLSR
404YDR126W6out1|ali|phd|phdHtm|336202.2423,70,102,172,199,232MSWNLLFVLLIGFVVLILLS
405YDR264C6out1|ali|phd|phdHtm|764303.23200,353,406,436,531,590MVNELENVPRASTLTNEEQT
406YDR284C6out1|ali|phd|phdHtm|289111.0438,86,114,188,215,244MNRVSFIKTPFNIGAKWRLE
407YDR319C6out1|ali|phd|phdHtm|274121.3232,75,138,194,235,265MIRQLNYWSRKAYLIYPFQV
408YLR242C6out1|ali|phd|phdHtm|321727.7461,123,194,243,291,313MICITCMRPVDSLYTVYSND
409YMR319C6out1|ali|phd|phdHtm|552101.58116,241,292,373,404,485MGKIAEFLGNPGARPDVHHR
410YNL294C6out1|ali|phd|phdHtm|5339119.38119,148,197,228,267,300MNLWRHSPEELAAYNSCHPM
411YNL305C6out1|ali|phd|phdHtm|297727.13102,166,191,225,254,289MSGPPPPYEEQSSHLYGQPA
412YPR114W6out1|ali|phd|phdHtm|315333.2357,118,174,196,248,296MDVLLSLPQPELFKTTVIPF
413YLR188W5in95|ali|phd|phdHtm|69521-2.39118,175,265,356,387MIVRMIRLCKGPKLLRSQFA
414YPR011C5in45|ali|phd|phdHtm|32620-2.6743,144,212,251,317MAEVLTVLEQPNSIKDFLKQ
415YHR026W5in35|ali|phd|phdHtm|21345-4.4435,77,120,166,203MNKESKDDDMSLGKFSFSHF
416YKL120W5in20|ali|phd|phdHtm|32411-1.5044,149,212,249,306MSSDNSKQDKQIEKTAAQKI
417YOR271C5in4|ali|phd|phdHtm|32712-1.09119,165,199,253,290MASSVPGPIDLPESRYDLST
418YPR117W5in2|ali|phd|phdHtm|248930-3.5637,73,144,731,807MSMLPWSQIRDVSKLLLGFM
419YAL018C5in1|ali|phd|phdHtm|32594-9.62116,142,202,231,288MSFTGSLALAGIGGLVYKFG
420YBR040W5in1|ali|phd|phdHtm|29830-3.5837,157,180,215,261MVAISMIWFFTKRMPRIFAL
421YDR413C5in1|ali|phd|phdHtm|19183-8.8034,63,109,161,184MRLHYLLRLLSFAFLWFILR
422YDR503C5in1|ali|phd|phdHtm|27483-8.3236,85,135,231,258MISVMADEKHKEYFKLYYFQ
423YGL152C5in1|ali|phd|phdHtm|22534-3.7864,90,143,175,204MSIVSRTVTITISVKKLITY
424YGL218W5in1|ali|phd|phdHtm|21630-3.9187,109,134,171,216MVLVLSPRLVNQFCDVLKIK
425YGR096W5in1|ali|phd|phdHtm|31451-5.9639,131,187,234,303MFKEEDSLRKGQNVAAWKTL
426YGR172C5in1|ali|phd|phdHtm|24870-7.8698,136,192,215,246MSFYNTSNNANNGGGFYQPS
427YHR133C5in1|ali|phd|phdHtm|29132-3.55115,174,215,251,280MGKKKSKNQLNTGGVPNGVH
428YIL049W5in1|ali|phd|phdHtm|25321-2.4896,142,166,206,228MYFDEEQLLKYTIYAYRLSF
429YIL129C5in1|ali|phd|phdHtm|237630-3.20801,1081,1196,1724,2097MASRFTFPPQRDQGIGFTFP
430YJL039C5in1|ali|phd|phdHtm|168300-0.60246,289,800,931,1616MKWSAIPFQTLYRSIESGEF
431YJL109C5in1|ali|phd|phdHtm|176940-4.55277,965,1058,1370,1420MSSLSDQLAQVASNNATVAL
432YKR030W5in1|ali|phd|phdHtm|27394-10.67110,152,202,231,260MSYLPTYSNDLPAGPQGQRR
433YLR220W5in1|ali|phd|phdHtm|32242-4.56123,147,252,276,322MSIVALKNAVVTLIQKAKGS
434YML031W5in1|ali|phd|phdHtm|65532-3.7851,78,123,210,247MIQTPRELLNPRYTYHTIFS
435YMR119W5in1|ali|phd|phdHtm|62441-4.8197,131,171,231,292MNSSTSSENVFINSFSYLNQ
436YMR187C5in1|ali|phd|phdHtm|43140-4.97181,259,299,368,405MTPPHFFLSLIKKRCICWIC
437YNL080C5in1|ali|phd|phdHtm|36670-7.8766,159,185,216,341MTWILSTGMGPHEDKYAKHE
438YNL115C5in1|ali|phd|phdHtm|64411-1.59103,137,168,200,288MKANGLDNDPARTGMERTDI
439YNL156C5in1|ali|phd|phdHtm|29922-2.24126,184,222,255,287MANRGEPDPKKSTESICSLT
440YNL228W5in1|ali|phd|phdHtm|25830-3.2729,88,148,199,244MVWCHYILLVLTFFLFTTFF
441YNL263C5in1|ali|phd|phdHtm|31480-8.18171,210,238,264,313MSYNPYAYATSEQNGVNDRF
442YOL003C5in1|ali|phd|phdHtm|37810-1.0432,57,138,187,280MPVKLRWPWLGIAIPTFLIS
443YOL073C5in1|ali|phd|phdHtm|32250-5.5934,78,115,142,212MSMEPPVGLTAMPVTKLAMI
444YOR228C5in1|ali|phd|phdHtm|30251-5.5077,120,190,240,275MIKLHEVPPEPVDPASLPHD
445YOR292C5in1|ali|phd|phdHtm|30930-3.0171,107,201,242,281MPLQLFGRDQIVVHYDNGNM
446YDR039C5out68|ali|phd|phdHtm|1091404.9199,307,329,1011,1040MSEGTVKENNNEEFNAYHTL
447YBL030C5out63|ali|phd|phdHtm|318222.7643,149,209,244,307MSSNAQVKTPLPPAPAPKKE
448YOR100C5out13|ali|phd|phdHtm|327212.9356,120,162,260,317MSSDTSLSESSLLKEESGSL
449YBR104W5out11|ali|phd|phdHtm|329000.3556,109,163,261,318MSEEFPTPQLLDELEDQQKV
450YPR058W5out11|ali|phd|phdHtm|307101.5946,100,141,240,300MSEEFPSPQLIDDLEEHPQH
451YOR034C5out10|ali|phd|phdHtm|74900-0.95329,381,413,509,568MTSMSIIDDENVKKTSNGAA
452YER026C5out5|ali|phd|phdHtm|276232.75101,129,182,235,270MVESDEDFAPQEFPHTDTDV
453YDR410C5out4|ali|phd|phdHtm|239242.9143,65,105,137,202MHQDFQEDEHEYPDIRRNPL
454YBR275C5unk3|ali|phd|phdHtm|1916000.00MSKDFSDKKKHTIDRIDQHI
num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
455YCR010C5out3|ali|phd|phdHtm|283333.43109,136,168,213,256MSDKEQTSGNTDLENAPAGY
456YDL015C5out2|ali|phd|phdHtm|310101.38105,146,179,220,280MPITIKSRSKGLRDTEIDLS
457YOR175C5out2|ali|phd|phdHtm|619404.2872,94,289,449,474MYNPVDAVLTKIITNYGIDS
458YPR113W5out2|ali|phd|phdHtm|220818.1038,60,108,168,198MSSNSTPEKVTAEHVLWYIP
459YBR042C5out1|ali|phd|phdHtm|3979111.5535,75,139,161,394MLHQKIAHKVRKVVVPGISL
460YCR087W5out1|ali|phd|phdHtm|171000.7150,73,102,127,152MSIYLHIKFRLFLCIPDLPL
461YDL073W5unk1|ali|phd|phdHtm|984000.00MGPAIHNQLYECGLKTTSQD
462YDL148C5unk1|ali|phd|phdHtm|810000.00MAGSQLKNLKAALKARGLTG
463YDR018C5out1|ali|phd|phdHtm|3969112.4746,84,142,164,392MKHSQKYRRYGIYEKTGNPF
464YDR149C5out1|ali|phd|phdHtm|235222.8345,86,149,183,211MPFFVNVKISKSVFRSFRLS
465YDR459C5out1|ali|phd|phdHtm|37400-0.0134,78,196,236,312MALSWNIRIRRRSWFRFILP
466YGL161C5out1|ali|phd|phdHtm|3109211.55156,198,240,267,308MPSNNSSFLDIDDDLEGVDD
467YGL198W5out1|ali|phd|phdHtm|2619010.22121,143,172,205,234MSYGREDTTIEPDFIEPDAP
468YHR181W5out1|ali|phd|phdHtm|228212.5627,64,107,159,211MLLELISYAGTVSGFLFLTL
469YJL097W5out1|ali|phd|phdHtm|2179710.2133,80,123,156,196MSKKLASPLSFLPLYNLLSA
470YLR414C5out1|ali|phd|phdHtm|263323.5326,76,167,196,244MRNFFTLFFAAIFSLGALIL
471YML066C5out1|ali|phd|phdHtm|369818.4724,68,238,283,338MLFPKRLIVWGVLLILSLSQ
472YNL109W5out1|ali|phd|phdHtm|181121.7638,68,100,134,168MQKCIMRSTEFKTHFSFHSI
473YNL159C5out1|ali|phd|phdHtm|289414.47140,174,204,236,265MARPQNHRRSNWTERDDNDD
474YNL279W5out1|ali|phd|phdHtm|661404.9438,125,314,445,648MSGFKCYLQLGDRLSQIWLN
475YOL044W5out1|ali|phd|phdHtm|383000.5994,143,195,358,380MAASEIMNNLPMHSLDSSLR
476YOR149C5out1|ali|phd|phdHtm|516404.29204,228,292,314,366MMRYQWWLYLVYAIGLMLCL
477YOR180C5out1|ali|phd|phdHtm|271202.9646,108,130,153,189MSSRVCYHINGPFFIIKLID
478YPL162C5out1|ali|phd|phdHtm|273030.7734,72,119,179,217MYVSNGKDTCQLLGPVSLFV
479YPL224C5out1|ali|phd|phdHtm|449202.75154,230,277,320,342MLRISIDSIKQFGSFVTGYN
480YPR128C5out1|ali|phd|phdHtm|328515.4597,145,203,244,301MLTLESALTGAVASAMANIA
481YMR056C4in66|ali|phd|phdHtm|30912-1.85140,201,235,298MSHTETQTQQSHFGVDFLMG
482YLR348C4in29|ali|phd|phdHtm|29821-2.2835,126,227,282MSTNAKESAGKNIKYPWWYG
483YER118C4in24|ali|phd|phdHtm|36773-7.7452,87,109,142MSISSKIRPTPRKPSRMATD
484YGL055W4in17|ali|phd|phdHtm|51052-5.24130,156,275,299MPTSGTTIELIDDQFPKDDS
485YDL248W4in13|ali|phd|phdHtm|38393-14.1064,90,255,277MKENEVKDEKSVDVLSFKQL
486YHL048W4in13|ali|phd|phdHtm|38190-11.8865,90,262,284MKENEVKDEKSVDVLSFKQL
487YBR302C4in12|ali|phd|phdHtm|37993-11.5464,89,254,276MKENELKNEKSVDVLSFKQL
488YFL062W4in12|ali|phd|phdHtm|37992-11.0364,90,255,277MKENELKNEKSVDVLSFKQL
489YGL263W4in12|ali|phd|phdHtm|38023-2.0763,87,251,273MDGAKFENTVAFLPSEIFDC
490YGR295C4in12|ali|phd|phdHtm|38193-10.4564,90,254,276MKENELKNEKSVDVLSVKQL
491YJR161C4in12|ali|phd|phdHtm|38393-11.1564,90,254,276MKENELKNEKSVDVLSFKQL
492YKL219W4in12|ali|phd|phdHtm|40742-4.2788,118,283,305MQIVRSCNSNNKPLIPSSNW
493YML132W4in12|ali|phd|phdHtm|37993-11.5464,89,254,276MKENELKNEKSVDVLSFKQL
494YNL336W4in12|ali|phd|phdHtm|38193-11.2465,90,255,277MKENELKNEKSVDVLSFKQL
495YNR075W4in12|ali|phd|phdHtm|37433-3.4058,83,246,269MGEEIRLLSSKGLETHSSFC
496YIL134W4in8|ali|phd|phdHtm|31121-2.0597,146,204,305MVDHQWTPLQKEVISGLSAG
497YOR363C4in7|ali|phd|phdHtm|99620-2.12349,412,663,700MYFTDESSPAMNRVGKKRNR
498YPR028W4in5|ali|phd|phdHtm|18090-13.9559,81,121,143MSEYASSIHSQMKQFDTKYS
499YBL011W4in4|ali|phd|phdHtm|75920-2.0866,461,511,543MPAPKLTEKFASSKSTQKTT
500YLR426W4in4|ali|phd|phdHtm|32620-2.7629,51,217,312MNIDCLCRWVVLPLLRYPLL
501YKR067W4in3|ali|phd|phdHtm|74311-1.1055,468,520,557MSAPAADHNAAKPIPHVPQA
502YLR350W4in3|ali|phd|phdHtm|21614-1.4097,122,174,198MIDRTKNESPAFEESPLTPN
503YDL212W4in2|ali|phd|phdHtm|21094-18.9929,79,113,155MFSYSDFCSIGTAMILSATT
504YDL222C4in2|ali|phd|phdHtm|30935-3.7427,135,164,209MIFKRFVNLLVFLFLLGAGL
505YGR038W4in2|ali|phd|phdHtm|22212-1.28102,127,180,204MTELDYQGTAEAASTSYSRN
506YGR257C4in2|ali|phd|phdHtm|36661-6.39142,181,286,352MSDRNTSNSLTLKERMLSAG
507YJR054W4in2|ali|phd|phdHtm|49721-2.4154,77,99,240MFNHDWKYSINSKTFADLNI
508YKL202W4in2|ali|phd|phdHtm|19372-7.2690,114,145,167MQQYVKNDGNKYIIQMHRGK
509YLR413W4in2|ali|phd|phdHtm|67541-4.0827,552,587,631MNFKILLPICALLTLTTFLL
510YLR454W4in2|ali|phd|phdHtm|262870-7.1825,47,189,851MMFPINVLLYKWLIFAVTFL
511YNL194C4in2|ali|phd|phdHtm|30134-3.8928,136,165,210MSYKKFVYFINLFFLLGATL
512YDL133W4in1|ali|phd|phdHtm|43742-4.24288,330,365,423MGDSNSSQEAYSDTTSTNAS
513YDL218W4in1|ali|phd|phdHtm|31783-8.5231,73,95,155MKRVTGVFLTLLRFSQFASS
514YDR187C4in1|ali|phd|phdHtm|17294-10.9941,63,126,149MKRCACLSNSPTRHTTVVVP
515YDR367W4in1|ali|phd|phdHtm|22197-12.4136,70,102,173MRSSLLTLPKSFLGFMPLYL
516YEL045C4in1|ali|phd|phdHtm|14170-7.6755,84,106,132MKCHAKRTLAFLATALPLSG
517YER083C4in1|ali|phd|phdHtm|30781-8.04190,236,282,304MIWICTNELFHVCSISNVAL
518YGL020C4in1|ali|phd|phdHtm|23562-6.6518,121,153,200MHWAAAVAIFFIVVTKFLQY
519YGR036C4in1|ali|phd|phdHtm|23973-7.2355,77,154,192MNSTAAAINPNPNVIPFDDT
520YGR089W4in1|ali|phd|phdHtm|93650-5.0862,140,163,262MEEQFTNQKKVSHLQSLMNT
521YHR002W4in1|ali|phd|phdHtm|35741-4.74116,156,223,344MTRDSPDSNDSYKHINKNTT
522YIR014W4in1|ali|phd|phdHtm|27601-0.8884,148,178,207MAFLQGKKGKGYFNDEGLDD
523YJL051W4in1|ali|phd|phdHtm|82240-4.4738,64,94,138MCHNSVRSGNKAGFLGIKFG
524YJR118C4in1|ali|phd|phdHtm|20370-7.0833,75,105,131MAQALNSTNIAFFRVAFLFT
525YKL030W4in1|ali|phd|phdHtm|20180-8.0130,63,94,189MFLCYCCCCYCFYYCIIVLL
526YKL187C4in1|ali|phd|phdHtm|75091-10.2435,568,602,644MRIEKHRTPLSKGIIWTILS
527YLR050C4in1|ali|phd|phdHtm|16142-4.7031,82,125,161MKLGHREQQFYLWYFIVHIP
528YLR065C4in