--- -------------------------------------------------------------------------------- --- --- All proteins with at least 2 transmembrane helices in Saccharomyces cerevisiae --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 56 YDR216W 2 in 77 1323 4 0 -4.00 782,1097 MANVEKPNDCSGFPVVDLNS HMLDKMASDFHTLENHLKGN 57 YLR377C 2 in 63 348 1 1 -1.17 61,189 MPTLVNGPRRDSTEGFDTDI SIWLGSSGEIDKFLDHIGKS 58 YOR065W 2 in 25 309 9 2 -12.42 54,289 MFSNLSKRWAQRTLSKSFYS KFKWAGIKTRKFVFNPPKPR 59 YDL240W 2 in 10 1017 2 9 -2.00 368,504 MIQNSAGYRSLNTASPMTVQ IKTPVTVKDSTTTVIQGEIN 60 YKR042W 2 in 7 450 7 1 -7.40 63,100 MCFLLETSASPRSKLSKDFK GSGSDGCTVSVTSGSANFVF 61 YMR208W 2 in 5 443 1 0 -1.20 127,161 MSLPFLTSAPGKVIIFGEHS TTKQQIDDLLLPGNTNLPWT 62 YNL288W 2 in 5 373 9 1 -10.11 157,210 MFSAQKPIYGNGAGVNMGGG DDVGSKRCLAQLLLTLNEET 63 YDR472W 2 in 4 283 7 0 -7.54 192,242 MSQRIIQPSASDQQFPGKSD RTVYLIQFDRQVLDREGLRF 64 YDR522C 2 in 3 502 9 0 -11.83 56,502 MPIWKTQTFFTSISVIQIVN FIDAFKMSVYAVFTVLFSII 65 YAL043C 2 in 2 785 2 0 -2.00 108,243 MSSAEMEQLLQAKTLAMHNN QLKQEDEGLHKQCDSLLDRL 66 YDL039C 2 in 2 115 2 5 -2.68 91,115 MTSPASTSTISNVQSTASVM ANIEAVGKLVWLAAALPLAF 67 YDL217C 2 in 2 207 3 0 -3.45 142,190 MVYTGFGLEQISPAQKKPYN AAIDLYMKSEDGRPPQNDFK 68 YFR002W 2 in 2 839 0 0 -0.45 345,789 MLETLRGNKLHSGTSKGANK MIQYRMPRETYSTLINIDVS 69 YGR112W 2 in 2 389 8 1 -8.45 90,363 MSLLGARSTYRWFSIAASIP GGVVSQDQLMKEKLKHSRKY 70 YHR186C 2 in 2 1557 4 0 -4.00 597,934 MPEIYGPQPLKPLNTVMRHG TNSHDSIVNIYKCEDERIDY 71 YIR012W 2 in 2 431 5 0 -5.46 298,338 MEPQEEFITTEEVEQEIVPT QKRKVITAGDEGVSLVFEVP 72 YNL325C 2 in 2 879 9 0 -10.02 122,256 MNNDAMEHTLGGGILTTSGS PDNLQLYRDLCFSKDIQLDF 73 YAR030C 2 in 1 113 9 1 -24.24 54,105 MVLRRHKLLAQQRWLRVKFS NILPILHLRLFYNIRCLGKQ 74 YBL059W 2 in 1 193 9 4 -10.65 91,142 MLLDAQRFFNRSFSINVICE DKRSQQVVDSLVKTHNSSLC 75 YBR166C 2 in 1 452 3 1 -4.00 210,363 MVSEDKIEQWKATKVIGIIG EMIKTILSHSSDRSAAEKRN 76 YCR077C 2 in 1 797 6 0 -6.74 606,643 MSFFGLENSGNARDGPLDFE LNLFLNVMGLVYRDGEISEL 77 YDR102C 2 in 1 110 9 4 -10.09 44,98 MTLLLQKCIRVELRKDPIFN CIIIVATRWQKIDNALKMTG 78 YDR395W 2 in 1 944 3 0 -4.00 650,826 MVQEQAILSCIEQTMVADAK NYLDESKRDSLQVILEFVSQ 79 YDR434W 2 in 1 534 9 1 -14.64 29,492 MSNANLRKWVGFCFVAIYLF KEKLELKEAQKLHAIDGEDE 80 YER105C 2 in 1 1391 6 0 -6.00 235,1322 MYSTPLKKRIDYDRETFTAS KYDPNTDPVQDYVKDRHHGL 81 YGR015C 2 in 1 328 2 1 -2.74 57,128 MSRLAHNKALPYKIIVDLSF NPEDSFKCILNFFAEETLDF 82 YGR141W 2 in 1 467 9 0 -11.51 34,214 MRISKNSHKRQRTRLYFLVT SILRFLTWRGSVCFIMDYFT 83 YHR003C 2 in 1 429 6 0 -6.00 96,299 MANNTWKLIATTALISVFST VYSEEVLDFIERLFKEEEYY 84 YHR143W 2 in 1 325 1 0 -1.25 22,51 MKFNFSTIFNILFFLFTLIE QSVDAATTITSTNTIYATVT 85 YIL028W 2 in 1 132 3 4 -3.41 88,117 MDDARLFRRVVCMPFPMIML FTVIRVFSIHLNESVYSKPL 86 YJL067W 2 in 1 116 9 3 -12.68 63,90 MSKKRKRKYVLIVFVNTHHF VFWSSSQRLYGSAPSLDSLF 87 YJR071W 2 in 1 122 9 1 -9.86 77,110 MYSMAFLASSGLVANSSATV VIYMIKTFQLIEKNFLSSHA 88 YJR107W 2 in 1 328 2 0 -2.53 31,194 MPVVHCSSNLPITLYIYERL DWLHVYEHRAYFIDVVGCSG 89 YJR140C 2 in 1 1648 4 0 -4.00 552,762 MSMFNALNSNIEGEQYEAEE KKRVTKKEVFDRVRLLVDKI 90 YKL071W 2 in 1 256 3 0 -3.62 102,136 MNTSSRITYFIIGGSRGIGF RKILPEDNGKFFNYDGSEGV 91 YLR199C 2 in 1 220 4 2 -4.12 101,153 MNPLFPKNLLQLTSIGEIKT ECYRLWRCDSAAIGAQSGLY 92 YLR360W 2 in 1 439 1 1 -1.25 95,384 MKRFLLSRRQRHLRMICFHN IHYFNADILQFKQILENYRP 93 YLR451W 2 in 1 886 2 0 -2.00 251,563 MEGRSDFVATSQSGSEMSHS SDMVWRDVDILMNEFAFNPK 94 YLR453C 2 in 1 395 6 1 -6.67 261,345 MEHVDSDFAPIRRSKKVVDS AYNFKKNQRLPLKLTRKVHD 95 YMR237W 2 in 1 724 8 0 -8.86 315,679 MLSQTSIPEVKEDVIGYALH QLIDDNILNFLKNFTNDTFD 96 YNL128W 2 in 1 434 4 2 -4.16 59,376 MREEGSELEMEKGFLKWKPV GELSTHGLKLFQALKLEWEI 97 YNL210W 2 in 1 270 6 2 -6.67 91,265 MSNQHSPQPFCLDTKLVKLL DLYSIALAVTSIESALITLD 98 YNL248C 2 in 1 415 6 1 -6.84 346,377 MSVKRSVSEIEIESVQDQPS ATMKVPFKLPEMTRRGRGPR 99 YNR074C 2 in 1 378 6 1 -6.58 50,362 MTINTKNIVVVGAGVFGVSV LISRAKSKNLFSDKMEPLFK 100 YOR160W 2 in 1 972 2 0 -2.00 796,882 MDNLQVSDIETALQCISSTA REGIRAFVGWYSRKNINSRF 101 YOR166C 2 in 1 458 1 0 -2.00 257,390 MTDEKRAFPKGNNHIRSETF EKQSLEKQIHEWKTSINAIS 102 YOR170W 2 in 1 101 9 0 -12.50 45,72 MIYNWGCIIIMKTKMEYKPY SKGNFSPSTENKPDSTFGII 103 YPL185W 2 in 1 131 9 2 -22.91 27,120 MYLIFIIMFGYRRFIKFVFP CTPYWWNITAKFFIPFSHSS 104 YDL029W 2 out 386 391 1 0 1.60 148,368 MDPHNPIVLDQGTGFVKIGR WLSKQEWQESGPSAMTKFGP 105 YIL162W 2 out 31 660 9 0 13.73 110,143 MEVSGKTDEECDYKSLYVMS NMTTGVDNLFYIDKFQVREV 106 YJL167W 2 out 27 352 4 1 4.90 100,213 MASEKEIRRERFLNVFPKLV SRGFKADVLTAFLNKVYKRS 107 YMR110C 2 out 23 532 8 1 8.86 154,526 MSNDGSKILNYTPVSKIDEI QYFSLSAAVILISTIYAHCS 108 YJR150C 2 unk 20 298 0 0 0.00 21,298 MSRISILAVAAALVASATAA NKFNNGVFGAAAIAGAAALL 109 YDL055C 2 unk 17 361 0 0 0.00 MKGLILVGGYGTRLRPLTLT GGKVLPHKSISDNVPKEAII 110 YML099W-A 2 out 6 109 0 3 0.28 32,109 MNSENSKITFKPNILIKGVY LLAWLPNRSPLHFQLIWLPI 111 YEL040W 2 unk 4 467 0 1 0.00 20,467 MAIVNSWLICLVSIFSFVVR GANVAANWRLTVLCVILGYV 112 YIL130W 2 out 4 964 0 0 0.66 364,609 MPEQAQQGEQSVKRRRVTRA VFDQLDAQLFGKYLPLNYPS 113 YCR081W 2 out 3 1427 4 0 4.00 582,716 MNNGSGRYLLTPPDDLHPYV FNDSCVNLSLFDARFERKNP 114 YNR050C 2 out 3 446 0 0 0.10 88,409 MGKNVLLLGSGFVAQPVIDT DPIMKELKDKYGIYLKEKTV 115 YPR118W 2 out 3 411 6 0 6.66 201,310 MSLEAIVFDRSEPENVSVKV ITEEGVFTKNSSGEFQLESL 116 YAR068W 2 unk 2 161 0 0 0.00 MPQVQSWFPVQKQPTLAVTF ILLLPAPSLVLSFNPKVWLL 117 YCR001W 2 out 2 104 0 7 -0.49 51,104 MLYLLKKLKHIDSYGESNLS FISTFLKKISFFIYVNFTVY 118 YDR531W 2 out 2 367 2 1 2.34 162,300 MPRITQEISYNCDYGDNTFN LGAMGAFLSASRHSSTKKTS 119 YHR056C 2 out 2 832 2 1 2.50 630,672 MVAVPSASGMSTHGNGQGSN ESDNLGITTANFNDFYDAFY 120 YKL015W 2 out 2 979 5 0 5.72 412,481 MVTDQGSRHSIQSKQPAYVN NTMDPTAAAGSEIDFTDYLG 121 YKL027W 2 out 2 447 0 1 1.00 109,315 MVEKDTWKLITATALFTVAV AKVLKLVSQRFREEAYYSQF 122 YKL212W 2 out 2 623 1 0 1.13 541,574 MTGPIVYVQNADGIFFKLAE FKGLKYAQSPKFSKPDPLKR 123 YLR164W 2 out 2 168 5 1 5.11 115,141 MSSTKFLKPLCRIRAFHTSI AGLIASLKSLWDNKPVEKKR 124 YLR358C 2 out 2 187 0 2 0.89 91,138 MRNGKILCCHCFYNKGDHED ILPKLPLDACDVKSSIIVGI 125 YAL034C-B 2 out 1 117 5 0 5.92 51,79 MAAVHLYIISFTALMISSTS KSKIELKLIHKGSHFYIQLP 126 YBR053C 2 unk 1 358 0 0 0.00 MSSVGDFEEIILHDLKPYYH KIPNVLDGNVPLESTKRQPL 127 YBR096W 2 unk 1 230 0 0 0.00 MGVCTIFRWLFAAYLLSSYK RCGFHETVPLENLSQEYCSE 128 YBR163W 2 unk 1 585 0 0 0.00 MLGRALINKYGFLIHPRRFV ELKLIDLGKELKKIILESSM 129 YBR300C 2 unk 1 165 0 0 0.00 MAATPAAIEVSLTIVFVLFF RKSQNQICFEPSLRGHLIFV 130 YDL187C 2 out 1 109 0 6 -0.30 31,83 MQVASILQVRPPFFPQIHFL SRNRVHKYIPYKSTELRSVA 131 YDL233W 2 out 1 458 6 0 6.00 181,219 MYQGPPQPPPQAVPMPYIVN ELPTSDVNDINKDMTKKKMK 132 YDR082W 2 unk 1 494 0 0 0.00 MDKYGHIAHQEGDVCYYIPR NGMEDQNSGILLHLEYAAAY 133 YDR198C 2 out 1 479 0 1 0.00 134,250 MEGKVDVLLTWLKKSDKFYI LITIYKGYIKILTQHLQDLQ 134 YDR249C 2 out 1 373 4 2 4.29 276,301 MGYILTGYSSRHDKRKKHAL LKLIDLVVKCGGRPQYGVMF 135 YDR279W 2 out 1 350 6 2 6.00 125,260 MTVSNIGGEERLIILPDDYE QNKKPKVAIGKGAIDGFFKR 136 YDR335W 2 out 1 1224 9 0 16.57 176,201 MDSTGASQIVSALDVIYSPK GDMLDDPNIEDGAVGNLFDD 137 YDR349C 2 out 1 596 7 0 8.00 345,596 MTCLILWYLWLISTFQLEFA GHVTRIASLLLLSIFSILIV 138 YDR437W 2 out 1 140 9 6 11.01 31,71 MYTKEYYWFSQYMIITSTLV DLSLMDACQLLYLYDNDHTS 139 YER152C 2 out 1 443 4 0 4.00 130,382 MKYKEINFFKGHPSSRLLPR RGIELFGAVCKSHAITNNIT 140 YER155C 2 out 1 2167 0 0 0.00 468,708 MKGLLWSKNRKSSTASASSS LGAVQTILQDFIKNPNDYFK 141 YFL027C 2 out 1 497 3 1 3.84 289,448 MPLRSLFHTNQSSHDKDALT HVSHIWVDPIRDILKLGHPT 142 YGL168W 2 out 1 110 9 0 12.00 26,109 MFILVSVVNICTYIHLHMFP EIPSFSVLKILWKNGIYIAH 143 YGL258W 2 out 1 206 7 0 7.14 19,178 MSFLSIFTFFSVLISVATTV LPDYCTAIQLKAVCPPEAGF 144 YGR134W 2 out 1 1122 3 0 4.00 85,478 MTKKKAATNYAERQNLASED DKPIPLHEYITLAELDVGDS 145 YGR235C 2 out 1 233 9 2 32.44 138,165 MTKDFYRQLDPVEEKIVPPE LNKDVEKTGNAIKNWTGVNV 146 YHR056W-A 2 out 1 143 9 6 11.11 29,75 MNITTNGTTILTRSSIIIGV FSSCIGCKQAASSLFSLACP 147 YHR063C 2 out 1 379 9 0 11.00 33,238 MTAPHRSTIHILGLGAMGTV LATMRLALNRSRSINGDWRK 148 YIL077C 2 out 1 320 9 2 16.36 86,115 MLGKEEEQQYGQNGKGMENE SSSDDKYQRLLQSGRYGGNR 149 YJL161W 2 out 1 180 0 3 0.00 137,165 MLYTRLLRHNSQFTKFSGTS LIYMALKLRMKQLEKAGVRF 150 YJL206C 2 out 1 758 3 1 3.00 303,564 MTPKESGKPISCAMKKLKGK QDSSANNQIFSSEFSSDPTV 151 YJR004C 2 unk 1 650 0 1 0.00 20,650 MFTFLKIILWLFSLALASAI SIFFSAELGSIIFLLLSYLL 152 YLL059C 2 out 1 168 2 4 2.59 44,167 MCMCVVLVYFSILLDKGTKV ENGILLCQVLQALIIVQVMF 153 YLR122C 2 out 1 125 4 2 4.28 35,84 MNRLYQNCMFLYVYTDVCVR FQRIQTKNLSKYNCNIPACC 154 YLR318W 2 out 1 884 2 0 2.00 137,379 MKILFEFIQDKLDIDLQTNS LLRKEIQHLQAYIYIYIHIV 155 YLR349W 2 out 1 168 5 1 5.54 81,119 MAPLNMEQGKRYAMLVNCSR PYIYIHYKPTARPFPAPNIA 156 YLR365W 2 out 1 110 8 2 8.36 63,98 MVKGRHSKRKGNFHIILRNA HLHGSRSVAAQNFILFHDYL 157 YLR428C 2 out 1 114 1 3 1.67 46,82 MTANAPPPEAFQFTAINLPF VKIISPKFYLRSKVKNHAQR 158 YML030W 2 out 1 159 6 1 7.00 51,86 MSRMPSSFDVTERDLDDMTF EEEIKNLEKELSDLENKLGK 159 YML076C 2 out 1 944 7 0 8.00 525,715 MDTQIAITGVAVGKEINNDN LAWGVNSLNDEFWTDLFMND 160 YML094C-A 2 out 1 133 2 0 2.24 48,80 MSTMNFLLSTILPGMYNDAD ERTWLDFYSALSCLGHSKIF 161 YMR153C-A 2 out 1 111 5 2 5.62 45,110 MLESHQSTTFGGKVFHYKSF LRTFEVTAFALAFSKIPSVF 162 YMR209C 2 out 1 457 7 1 8.00 21,292 MVSSLASNIILALVVVLMTL DYESMYQGYYGLLKFHSVFE 163 YMR313C 2 out 1 642 7 0 7.33 53,223 MKETAQEYKVSAVIPTLLKN IKTRCAVEFKLDDIIRARRS 164 YNL083W 2 out 1 494 9 1 10.00 242,369 MLLKNCETDKQRDIRYACLF SNQSFKNKTTSPRNICTSLC 165 YNL150W 2 out 1 135 0 4 0.34 83,130 MMQVATSVMVRLFYQKTIEK STWAANCFFANSLDAIFLKS 166 YNR040W 2 out 1 256 1 3 1.57 60,107 MTNMAAKNQFKGSSFTLAQL AKTLFHSGNSRSSIKNIVKP 167 YOR135C 2 out 1 113 9 2 42.65 75,102 MVVNPLTKIGLTSQDSHSMG SFPICILLSTKVIQVQKKCI 168 YOR214C 2 out 1 236 0 2 0.00 21,234 MLGLYLSSLFFAFFMAQVFA SLMPSMGILSFLFGLYLLLH 169 YOR282W 2 out 1 106 9 0 10.00 58,86 MLLLTLQWAKVHVLVLHPSL FSNFFSSDINTMGKSGRHNI 170 YOR345C 2 out 1 116 4 5 4.99 43,93 MTLRAIGESSPPPRSACNSS YSKSLSNKSTRPPCSPIAGY 171 YOR387C 2 out 1 206 5 0 5.36 19,178 MSFLNIFTFFSVLVSVATAV LPDYCTAIQLKAVCPPDAGF 172 YPL035C 2 out 1 115 2 7 2.10 42,86 MKSFSIFFCKLDNEMGNSLF NSHFKSTVFSDMYDSKRLLY 173 YPR053C 2 out 1 151 1 0 1.50 51,136 MMYRTTLNTVQVSQISGAEF LKIQISHLDKSARSWVRSGR 174 YPR085C 2 out 1 448 8 0 8.00 97,236 MGVEHMRGFSNEIILKRTLT LAKCNWCLIGYEDGTIKLNK 175 YPR157W 2 out 1 467 2 0 2.10 22,209 MHCVLARILLWFLIVDLSVI GILRFLMWRGILCSLMEFFT 176 YPR177C 2 out 1 123 0 4 -0.95 41,104 MSSDVAGVKKSSSSSSSTSS CCKSTGRFSSAIYLLIFRST