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Transmembrane helices for yeast (Saccharomyces cerevisiae)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
783YHR079C2in52|ali|phd|phdHtm|111520-2.0028,555MRLLRRNMLVLTLLVCVFSS
784YIL147C2in36|ali|phd|phdHtm|122041-4.3343,354MRFGLPSKLELTPPFRIGIR
785YHR111W2in12|ali|phd|phdHtm|44041-4.8691,246MNDYHLEDTTSELEALRLEN
786YCR007C2in10|ali|phd|phdHtm|23985-8.2671,98MQPHLDNNSNNDDVKLDTLG
787YIR043C2in10|ali|phd|phdHtm|23091-15.18113,135MGCQEAFRTTLLEPFSLKKD
788YAR027W2in9|ali|phd|phdHtm|23526-2.7669,92MQTPSENTDVKLDTLDEPSA
789YGL053W2in9|ali|phd|phdHtm|23776-7.2069,94MQTPSENTNAKSDSLDEPGA
790YNL025C2in9|ali|phd|phdHtm|32390-11.24131,239MSGSFWTSTQRHHWQYTKAS
791YAR028W2in8|ali|phd|phdHtm|23466-6.3469,93MQTPSENTDVKMDTLDEPSA
792YAR031W2in8|ali|phd|phdHtm|29885-8.85131,156MSPQYHFYFVSFRNLVLNEK
793YAR033W2in8|ali|phd|phdHtm|23476-7.0269,94MQTPPESTDVKLDTLNEPSA
794YGL051W2in8|ali|phd|phdHtm|23456-5.1470,93MQTPLESTDVKLDTLNEPSA
795YAR023C2in7|ali|phd|phdHtm|17993-18.3729,51MINFLLFVLTILATLTNIWV
796YIL175W2in7|ali|phd|phdHtm|10599-13.3167,90YKLNRKEKNKDIFSKAYSWS
797YFL063W2in6|ali|phd|phdHtm|15177-7.6333,123MIVNNAHILTLPIPYHAPSV
798YPL175W2in6|ali|phd|phdHtm|46151-5.75311,431MSSSHKVESYNNENRMLCDF
799YGL200C2in4|ali|phd|phdHtm|20363-6.4424,191MASFATKFVIACFLFFSASA
800YLR291C2in4|ali|phd|phdHtm|38141-4.80258,360MSSQAFTSVHPNAATSDVNV
801YNL323W2in4|ali|phd|phdHtm|41493-12.0894,395MVNFDLGQVGEVFRRKDKGA
802YOL048C2in4|ali|phd|phdHtm|10687-8.5428,85MFFKVSNFTSLTLLSLIPIV
803YOL105C2in4|ali|phd|phdHtm|55690-9.8736,402MERVWFAKLTNKGTIKIGYI
804YOL112W2in4|ali|phd|phdHtm|49282-8.40267,355MIMSSTMSTEAALVPNESVF
805YBR078W2in3|ali|phd|phdHtm|46890-15.43425,453MQFKNALTATAILSASALAA
806YCL001W2in3|ali|phd|phdHtm|18839-3.1371,152MDYDSSDTMNGGSSNPLITK
807YCR094W2in3|ali|phd|phdHtm|39154-5.6364,354MVSLFKRGKAPPLTKEGPTS
808YGR105W2in3|ali|phd|phdHtm|7799-19.1232,57MAVDVPRAVINKLMLFTAAM
809YIL151C2in3|ali|phd|phdHtm|111840-4.02330,642MVDLMVPANDDPSNETDYSR
810YKL064W2in3|ali|phd|phdHtm|96950-5.09929,960MSTDNSQKDEGVPLLSPYSS
811YKL119C2in3|ali|phd|phdHtm|21596-21.05156,183MFEIKLNDRITEFLRKFKNS
812YNR048W2in3|ali|phd|phdHtm|39364-6.8065,357MGLILRWKEKKQLSSKQNAQ
813YOR024W2in3|ali|phd|phdHtm|10739-3.8928,100MRLQWPKFITFLSTGSCCLL
814YPR056W2in3|ali|phd|phdHtm|33851-5.0470,299MDAISDPTFKHARSRKQVTE
815YDL026W2in2|ali|phd|phdHtm|10329-2.8758,89MHESLRNWKLSPRYFGIAGD
816YDR257C2in2|ali|phd|phdHtm|49491-21.34190,365MDDFSRDTENFVCWLKTTAE
817YDR303C2in2|ali|phd|phdHtm|88540-4.00440,711MDIRGRKMKKPPACVQCRKR
818YDR326C2in2|ali|phd|phdHtm|143810-1.66707,1300MRDEATRKKRSFSDGHFFKK
819YGR091W2in2|ali|phd|phdHtm|49442-4.00115,242MSSEEDYFDELEYDLADEVN
820YGR278W2in2|ali|phd|phdHtm|57790-12.00139,161MSTATIQDEDIKFQRENWEM
821YHR110W2in2|ali|phd|phdHtm|21272-7.1125,200MKYNIVHGICLLFAITQAVG
822YJL038C2in2|ali|phd|phdHtm|21961-6.0021,214MRFQLFIYFYFTIVVIAGTN
823YJL054W2in2|ali|phd|phdHtm|47881-8.8751,385MSSESGKPIAKPIRKPGYTN
824YJR072C2in2|ali|phd|phdHtm|38552-5.33136,169MSLSTIICIGMAGSGKTTFM
825YKR033C2in2|ali|phd|phdHtm|14195-10.7151,73MDPLTINFSRIETFGLFVGN
826YLR080W2in2|ali|phd|phdHtm|44470-7.7043,431MTTRKTASSLQLLGKITGTK
827YLR324W2in2|ali|phd|phdHtm|52363-6.46131,211MSGNTTNVHETRAKFAETLQ
828YLR326W2in2|ali|phd|phdHtm|24026-2.67102,152MSGFIKSTLLGLGQDYLEDQ
829YMR316C-B2in2|ali|phd|phdHtm|10248-4.9252,75METNDSDDRIEAIVSEESDE
830YOR129C2in2|ali|phd|phdHtm|89391-10.00218,712MLRRELNNSISNRSIENESF
831YAL007C2in1|ali|phd|phdHtm|21546-4.2927,203MIKSTIALPSFFIVLILALV
832YAL009W2in1|ali|phd|phdHtm|25964-6.6294,125MEPESIGDVGNHAQDDSASI
833YAL042W2in1|ali|phd|phdHtm|41592-12.4446,398MKRSTLLSLDAFAKTEEDVR
834YBL062W2in1|ali|phd|phdHtm|12629-2.5730,94MCTYIITQSFFFLPCLSFLF
835YBL065W2in1|ali|phd|phdHtm|11487-8.8942,90MVDLMTVIMVRYSLFLTWEL
836YBL071C2in1|ali|phd|phdHtm|10219-1.8445,98MILLKSEHGGKRKEMRQDDL
837YBR064W2in1|ali|phd|phdHtm|14219-1.7258,119MDMVSPVLNLQSSILGELVG
838YBR074W2in1|ali|phd|phdHtm|41392-12.6436,372MKLKSVFRSVLKYRKTNLSL
839YBR136W2in1|ali|phd|phdHtm|236890-10.00928,1938MESHVKYLDELILAIKDLNS
840YBR185C2in1|ali|phd|phdHtm|27810-2.0094,188MSVLRSTCLFFPPRSLLISF
841YBR201W2in1|ali|phd|phdHtm|14138-3.2641,95MINIFVSANHLSTLENSFNL
842YBR232C2in1|ali|phd|phdHtm|11970-7.6975,98MFILAEVSDFILDIVAPLCP
843YBR265W2in1|ali|phd|phdHtm|32023-2.28181,302MKFTLEDQVVLITGGSQGLG
844YBR292C2in1|ali|phd|phdHtm|12359-5.1343,93MKFPADYHYTSPFRSCKYSN
845YCL023C2in1|ali|phd|phdHtm|11599-20.0063,90MARALMLRKLDLAGATKAQC
846YCR062W2in1|ali|phd|phdHtm|12069-6.8641,107MSQHAQSSQFSTTIHTQWGY
847YDL032W2in1|ali|phd|phdHtm|10326-2.2970,102MAPCQGRPKIVIQTSSAYIL
848YDL111C2in1|ali|phd|phdHtm|26550-5.33151,199MSLSVAEKSYLYDSLASTPS
849YDR042C2in1|ali|phd|phdHtm|20095-9.3241,97MEQILYNQSLKISTLSTFQG
850YDR114C2in1|ali|phd|phdHtm|10099-9.5235,89MKTFFLIEAGRALQIVAFRP
851YDR240C2in1|ali|phd|phdHtm|49241-4.71136,483MRPRRRGLAYHHTKPKGQLS
852YDR275W2in1|ali|phd|phdHtm|23593-14.5262,92MFFFPKLRKLIGSTVIDHDT
853YDR278C2in1|ali|phd|phdHtm|10592-10.9454,77MNVSFRSNYHQGTIRCSVTA
854YDR401W2in1|ali|phd|phdHtm|18796-11.7487,142MFYIYSIIFSLNFNFKLRGQ
855YDR420W2in1|ali|phd|phdHtm|180260-6.001270,1505MVSLKIKKILLLVSLLNAIE
856YDR467C2in1|ali|phd|phdHtm|10869-6.5645,74MIYMLVFLDRQQLVHIFLFR
857YDR504C2in1|ali|phd|phdHtm|12789-8.3544,81MICYFLVVTINFLKEKTTIC
858YEL001C2in1|ali|phd|phdHtm|22592-16.95168,191MRFSMLIGFNLLTALSSFCA
859YEL002C2in1|ali|phd|phdHtm|43090-11.8123,414MRTDWNFFFCILLQAIFVVG
860YER068C-A2in1|ali|phd|phdHtm|14375-7.4340,130MAPPTLITANCCCETEVKYF
861YER093C-A2in1|ali|phd|phdHtm|13774-7.2838,90MIEEKKELKKRRVLQMARFY
862YFL032W2in1|ali|phd|phdHtm|10699-11.7545,81MRVVRQSGSALSRAKKSRKY
863YFL068W2in1|ali|phd|phdHtm|16036-3.2258,154MMPAKLQLDVLRTLQSSARH
864YFR035C2in1|ali|phd|phdHtm|11499-14.9376,105MSASDKTKLCNKGMSRTSRT
865YFR056C2in1|ali|phd|phdHtm|12229-2.4854,84MMVDPLYKGGLTKPLCSSGL
866YGL036W2in1|ali|phd|phdHtm|90910-2.00111,360MQKCAGHAPLVTAASRVSQD
867YGL074C2in1|ali|phd|phdHtm|10898-11.3563,102MAVEDVVLASVRSVVKISFG
868YGR147C2in1|ali|phd|phdHtm|28875-8.00120,220MMVPRISASPVFKRIFLRWG
869YGR182C2in1|ali|phd|phdHtm|11798-17.3365,89MSRQSAFKFQNGNRHERACL
870YGR290W2in1|ali|phd|phdHtm|14779-7.9537,121MDHRAAFGYFSNACFKVMLF
871YHL044W2in1|ali|phd|phdHtm|23596-17.6563,92MSSELLISNSKPRPEGLRKL
872YHR021W-A2in1|ali|phd|phdHtm|15129-2.1938,73MNRSFHFLIKYIYIHVLLVF
873YHR192W2in1|ali|phd|phdHtm|27883-8.1271,99MFSALGKWVRGSRNDKDFVT
874YHR194W2in1|ali|phd|phdHtm|57990-10.00136,500MSLFTRPFLRSPRQFSVARY
875YIL039W2in1|ali|phd|phdHtm|47391-14.7527,466MLRCAVKKFAYFATFLTIVA
876YIL054W2in1|ali|phd|phdHtm|10586-8.6276,98MAPKAFFVCLPWVLPRHALI
877YIL058W2in1|ali|phd|phdHtm|9432-3.7935,75MMDGHVQGLRKPLIPMSHVV
878YIL071C2in1|ali|phd|phdHtm|44411-1.33238,316MFHGAKGPLLIERIGHLLSI
879YIL071W-A2in1|ali|phd|phdHtm|15899-12.1476,109MNNKVTLLPPRVFFCLSWSV
880YIL156W-A2in1|ali|phd|phdHtm|13398-15.1645,92MATENNKNPAIRFLLSVVGS
881YJL044C2in1|ali|phd|phdHtm|45892-10.00306,332MKDVLQWAIDHYETRDQLVQ
882YJL077C2in1|ali|phd|phdHtm|13169-6.6956,95MHISLPTRNKSYFRIRTRTY
num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
883YJL142C2in1|ali|phd|phdHtm|13053-5.3840,126MTMQKASKVNMEVRTTLVTM
884YJL170C2in1|ali|phd|phdHtm|18395-16.5742,179MKKYCCQCKSCKMSVPVQPW
885YJR087W2in1|ali|phd|phdHtm|11685-8.0548,110MIVIESKKKKNIHAFSYPLS
886YKL037W2in1|ali|phd|phdHtm|11817-1.9362,116MQTMGGEHLLLSQLKGSFFL
887YKL131W2in1|ali|phd|phdHtm|17304-0.1358,148MHHWQFFLAKYTRATLVSSS
888YKL177W2in1|ali|phd|phdHtm|11219-1.6762,104MMLVTAHDMPIFAPTCNLMT
889YKR032W2in1|ali|phd|phdHtm|10499-9.8477,102MAYSSLCLCLLFNPKGCSNL
890YKR044W2in1|ali|phd|phdHtm|44392-20.5029,414MSRDVRAEKLAISLLILSLF
891YKR064W2in1|ali|phd|phdHtm|86360-6.00325,634MGYDSQVRTKKRHRITVVCT
892YKR065C2in1|ali|phd|phdHtm|19791-16.0086,120MFTSAIRLSSQRLFASQPSV
893YLL012W2in1|ali|phd|phdHtm|57300-0.8232,412MGVSAVLKRARNLLATFIVC
894YLL014W2in1|ali|phd|phdHtm|10816-1.9867,107MSSNEEVFTQINATANVVDN
895YLL037W2in1|ali|phd|phdHtm|12647-4.2926,120MLSRLIQHITSIFVFSFFFL
896YLL052C2in1|ali|phd|phdHtm|14997-9.3872,107MSNESNDLEKNISHLDPTGV
897YLR226W2in1|ali|phd|phdHtm|39572-8.00123,259MSATSSSGDVKKFQAVPKPT
898YLR235C2in1|ali|phd|phdHtm|13254-5.5684,112MLIGAPSNMRLRGALELLWR
899YLR265C2in1|ali|phd|phdHtm|34242-4.9148,146MDSELKGQQLSDAEWCVKKI
900YLR311C2in1|ali|phd|phdHtm|11599-11.9838,86MKLTKEKKNDCLVGVSYIPP
901YLR404W2in1|ali|phd|phdHtm|28576-7.2138,269MKINVSRPLQFLQWSSYIVV
902YLR463C2in1|ali|phd|phdHtm|18324-2.2852,99MGSSFVIDRSSSSPAPPRGP
903YML048W2in1|ali|phd|phdHtm|40330-3.88130,199MEIYIRLNADVEHDYAFQVS
904YML064C2in1|ali|phd|phdHtm|24543-4.82102,189MATPSTGANNSIPAVRNQVE
905YML101C-A2in1|ali|phd|phdHtm|10591-12.0747,69MYRIKYIKNHKSTGVGCMRL
906YMR024W2in1|ali|phd|phdHtm|39021-2.79199,270MGIVLKRAIAAGMKPFPNST
907YMR123W2in1|ali|phd|phdHtm|12296-18.6750,72MANFFVRLWESVFEPGTSPQ
908YMR126C2in1|ali|phd|phdHtm|34294-12.3932,69MSGFAKLKSWLYKASLFVSL
909YMR135W-A2in1|ali|phd|phdHtm|17792-9.6855,78MAEYLATCSFHSSFVKHFFP
910YMR148W2in1|ali|phd|phdHtm|14899-11.1131,54MVSTATFFFFVYLTLFVVIG
911YMR304C-A2in1|ali|phd|phdHtm|11629-2.7376,106MIYGKMMGNTVLKNTGVFYQ
912YMR316C-A2in1|ali|phd|phdHtm|10357-5.4651,81MTGFKVSSFFYILALSRFFN
913YNL013C2in1|ali|phd|phdHtm|12539-3.7744,79MLTSKIYKLLTERDVLDFKL
914YNL019C2in1|ali|phd|phdHtm|28450-5.4732,102MLYSRESRTTVLFLALVTSL
915YNL033W2in1|ali|phd|phdHtm|28450-5.4732,102MLYSRESRTTVLFLALVTSL
916YNL046W2in1|ali|phd|phdHtm|17225-2.01121,168MEHVSKRSIGQFFKRKTSTV
917YNL105W2in1|ali|phd|phdHtm|14258-5.3640,121MSMKSHLELFKQKKSTAYIL
918YNL114C2in1|ali|phd|phdHtm|12397-15.7977,99MRYRVTTKFYVWIFHYNVTK
919YNL158W2in1|ali|phd|phdHtm|19814-1.0426,183MVRPQNVHWFIATIVFFIGF
920YNL266W2in1|ali|phd|phdHtm|13999-10.4658,86MWLINHTYKLLSYFLRKASN
921YNR026C2in1|ali|phd|phdHtm|47110-1.00155,371MKFVTASYNVGYPAYGAKFL
922YOL007C2in1|ali|phd|phdHtm|34190-16.5824,154MRLPEISIWKVILLLHLFAL
923YOL037C2in1|ali|phd|phdHtm|11791-19.6167,108MSKLSRKSILDEDEDVEEIL
924YOL053W2in1|ali|phd|phdHtm|39560-6.9271,179MWGLCKKHFPSNKIQVQERN
925YOL099C2in1|ali|phd|phdHtm|16378-7.0371,148MKTLDKITNYDLFDFADEFL
926YOR015W2in1|ali|phd|phdHtm|11959-5.5675,101MPHFKRAAVYEEQKRTGKWG
927YOR016C2in1|ali|phd|phdHtm|20746-4.6222,195MRVFTLIAILFSSSLLTHAF
928YOR029W2in1|ali|phd|phdHtm|11196-12.6855,77MMQTSTSSRVRRYPYQITLS
929YOR268C2in1|ali|phd|phdHtm|13294-13.6486,113MVFVFPFPFFSYGFSSFLEA
930YOR320C2in1|ali|phd|phdHtm|49191-11.0029,228MRLISKRRIRFIVFILFGVL
931YOR364W2in1|ali|phd|phdHtm|12269-6.2347,102MVLQPFKFQNQKKFCRKANP
932YOR376W2in1|ali|phd|phdHtm|12297-11.5142,77MKNRKFSNLLLLRLRILCFN
933YPL016W2in1|ali|phd|phdHtm|131480-8.001004,1155MDFFNLNNNNNNNNTTTTTT
934YPL041C2in1|ali|phd|phdHtm|20777-7.01118,191MTVMNLFFRPCQLQMGSGPL
935YPL044C2in1|ali|phd|phdHtm|18241-4.4937,98MVASTTVPYLPKIFFNLTGS
936YPL078C2in1|ali|phd|phdHtm|24494-18.0085,108MSMSMGVRGLALRSVSKTLF
937YPL102C2in1|ali|phd|phdHtm|10095-13.2171,93MALRKFVEDLLTVDLLARYL
938YPL182C2in1|ali|phd|phdHtm|12798-9.3858,103MKNPESSGVSSSPQIQRVSP
939YPL277C2in1|ali|phd|phdHtm|48790-13.8828,465MRFHRQGISAIIGVLLIVLL
940YPR036W2in1|ali|phd|phdHtm|47861-6.00154,260MGATKILMDSTHFNEIRSII
941YPR038W2in1|ali|phd|phdHtm|11919-1.9373,109MVCFSISFNRASFFSAAAPC
942YPR063C2in1|ali|phd|phdHtm|14012-1.7959,108MTLNNVARPDLCVSYKKIAP
943YPR079W2in1|ali|phd|phdHtm|38172-7.8825,257MLKRSSLIYLSCVLIITIPI
944YPR126C2in1|ali|phd|phdHtm|10259-5.6656,86MLARVAESVSCGLMGQVKTG
945YPR130C2in1|ali|phd|phdHtm|13582-8.0158,135MYILNDILNLHRNIILKFNV
946YPR146C2in1|ali|phd|phdHtm|10948-4.2831,65MQNMLSMHFFSVMASLNAMA
947YPR155C2in1|ali|phd|phdHtm|61690-12.00338,508MIINRRILKSFEEISHSLEE
948YDL171C2unk43|ali|phd|phdHtm|2145000.00MPVLKSDNFDPLEEAYEGGT
949YHR039C2out28|ali|phd|phdHtm|644404.2266,264MSKVYLNSDMINHLNSTVQA
950YCL017C2unk26|ali|phd|phdHtm|497000.00MLKSTATRSITRLSQVYNVP
951YOR394W2out20|ali|phd|phdHtm|1649110.1536,60MTNEGIGINRDTSTICLREY
952YGR244C2out16|ali|phd|phdHtm|427000.40316,372MYSRKSLSLISKCGQLSRLN
953YMR085W2out15|ali|phd|phdHtm|432323.83237,411MEFYLSSDCASLARYVSKVV
954YBR067C2unk14|ali|phd|phdHtm|210000.00MSVSKIAFVLSAIASLAVAD
955YHL043W2out13|ali|phd|phdHtm|170575.9362,114MEGRKSEDEKNEAALACDVF
956YMR015C2out10|ali|phd|phdHtm|538606.3761,121MSSVAENIIQHATHNSTLHQ
957YJL222W2out8|ali|phd|phdHtm|1549494.0018,1388MALFRALYIIWVFLLIPLSN
958YIL145C2out7|ali|phd|phdHtm|345202.0536,189