--- -------------------------------------------------------------------------------- --- --- All proteins with at least 7 transmembrane helices in Ureaplasma urealyticum --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 15 uu511 9 in 9 378 9 2 -9.45 40,74,112,134,159,202,248,308,359 MISVNKINEKTKNTFFKRFY GSLQDENLFPNIQKFFIQLI 16 uu014 9 in 8 736 8 1 -8.16 47,93,115,151,173,232,278,325,362 MLKFKTLLSYDSFLKGQERK WLTTAYQKAIINQQNMKEVI 17 uu025 9 in 4 367 6 3 -6.52 47,110,151,173,198,248,296,335,358 MQNYTFRFKLFKQIKNQQVK WMSFIGAPVLAYLGWKHWNR 18 uu357 9 in 2 356 6 3 -6.68 52,109,142,164,199,239,286,325,350 MQIKQVNINKKDLSIYKKLI PNFLMAIVSAFVLIFIMRKH 19 uu022 9 in 1 340 5 0 -5.45 45,67,115,141,170,223,271,315,337 MSIKIKHDQNLKHQFEQKLF ILLVPIISGPYFLYQVILLK 20 uu023 9 in 1 341 9 2 -10.73 44,81,110,143,180,218,268,304,328 MKIKLKFENKLNFKKYLIYK VFAIPMIVLLKWELGWKVNK 21 uu070 9 in 1 356 6 2 -6.57 47,89,118,152,182,237,289,330,352 MKINQKTNLKQKHFYLIKNL VGFLSTTIITPYFMYLIVRG 22 uu358 9 in 1 367 7 3 -7.58 62,104,137,168,203,248,295,331,361 MKNPSRFIFIIKNNILNTIN IVTPLLVAPIFTFIILFKNN 23 uu399 9 in 1 348 7 0 -7.57 58,89,125,157,187,232,275,310,339 MKMKFNFFKDKQNILGQNHI HVGAILPLLIGPYFIYKVLR 24 uu516 9 in 1 341 2 2 -2.78 45,77,112,145,175,221,261,283,330 MINLNTWNKTHSFKNPLKYQ IPLIISPYFIYIIVKKNKSD 25 uu218 9 out 15 510 8 1 8.10 65,100,168,195,233,267,304,355,436 MRIVSTIITTSWGVDPNIYF GVKYSLLNNKNQQNHKVAND 26 uu219 9 out 14 521 7 1 7.74 60,95,163,190,227,262,298,349,436 MKIVSTWGLNKDIYFSTHEL PVFIENENDCTWQSKSRECT 27 uu317 9 out 1 1575 1 0 1.89 519,561,583,610,652,677,1467,1519,1559 MFRNLIKNVYRYLLKSKASF MWAIAIWILRRSNIADASKR 28 uu405_1 9 out 1 398 6 2 6.89 52,100,134,184,239,271,308,338,383 MINNKKFINKTFDNTNQIRL SINWTILKFINKYKNNKILI 29 uu543 9 out 1 1413 1 9 1.39 176,228,276,315,342,1216,1303,1357,1390 MINQTIVKFTLPNGRKKRIA LQMLYKTKKLNLPKALNQFN 30 uu264 8 in 60 982 3 0 -3.94 65,99,266,299,706,767,878,914 MSFDPENINPSTGLNDEQVL ALLNNLIIKRKILINKCHKE 31 uu547 8 in 3 338 4 4 -4.68 43,83,118,147,186,232,273,316 MSVLHTTNTSQGNGINSWQS LIRYDYEDDIVEDKHIPIHV 32 uu013 8 out 2 309 1 4 1.81 28,52,93,116,169,217,254,293 MPSLSLINDASIYAAILILG SFSKYSVAPKNVGIPFDKTK 33 uu510 8 out 1 658 2 0 2.77 179,213,284,312,335,401,423,635 MKIVQQTSDNECGVCVINML HYLKKYFDQIINLNDEKMDK 34 uu203 7 in 28 709 4 0 -4.89 46,78,114,144,302,353,665 MLKNNLIKKFQLLPINKRRY VNKKQIHKLNLKIINEAMLH 35 uu109 7 in 6 284 0 1 -0.84 32,91,135,158,206,228,258 MKQINWLSWLRNFYIWIILA KLKLINKQTNKRKLKIWNRQ 36 uu390 7 in 1 271 4 7 -4.50 54,88,128,157,186,223,266 MNLKSFEFLKGDAIVDNQIK FASFNRILLYVIRLFLLFKR 37 uu573 7 in 1 428 6 0 -6.24 63,103,145,199,237,284,313 MTNDERKEFIRKNKIIYFNR NVKVRSASNVTKVLGRSSTK 38 uu075 7 out 6 335 9 2 13.71 49,84,119,161,234,258,291 MQLEIINPESTLVNDVVAHR DQIHKFGELRKPEEFLFYCH 39 uu565 7 out 5 494 6 1 6.55 93,115,151,180,319,365,400 MSNNEEKTHHKNKIKKIFNW IVIYPIIDIDGEMVVKKSTI 40 uu330 7 out 3 327 3 5 3.83 66,95,135,173,221,265,309 MNSRFKFNYDINNKLALSFT ISAFDYVFLNIKQINMHKWK 41 uu409 7 out 2 306 9 4 15.85 24,66,121,147,192,220,279 MSANYFLIGLTIFCITCIGL NKYNIKYSQERNYFAYVKNC 42 uu031 7 out 1 254 5 0 5.80 43,94,116,141,170,198,242 MAIVAKINGNASEWYHAPIA VLIILIKKVSWKSITISSNS 43 uu220 7 out 1 428 7 1 7.11 214,238,289,311,333,364,418 MPRINTQVFNENNDKNRIKS ILGLIFYLMYTILKRKYTIK