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Transmembrane helices for trepa (Treponema pallidum)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
1332328017in4|ali|phd|phdHtm|63240-4.7532,77,124,159,189,223,245,283,326,379, 401,446,468,500,541,584,627 MKGTRGQLVLRSIALLLIGT
2332227612in7|ali|phd|phdHtm|44350-5.3934,63,119,168,197,244,275,302,331,364, 396,439 MSRRKQGRELFNSHVGVVLS
3332253912in7|ali|phd|phdHtm|45592-11.0927,59,95,135,166,211,253,303,345,367, 394,435 MIHTHTLSLSFMLFSFFFGA
4332280812in3|ali|phd|phdHtm|52670-7.65116,153,181,205,265,296,338,376,418,440, 472,505 MKSKSSLLKSGLLLSLLTLV
5332325512in2|ali|phd|phdHtm|40720-2.3336,58,94,134,156,194,226,257,306,336, 359,388 MKIWLKFFVGSCIGALVAYT
6332236912in1|ali|phd|phdHtm|51081-8.8931,63,107,156,212,243,280,339,374,426, 474,498 MQKEKCDFSVSLIPLGIVIS
7332240412out3|ali|phd|phdHtm|575000.5249,88,119,151,215,269,291,328,379,435, 498,547 MRPMHIGNLTHLTMLVLCLA
8332285811in1|ali|phd|phdHtm|49530-3.0425,55,101,146,175,228,267,346,406,445, 485 MFFSLLSPAAFLFIFFILYW
9332321511in1|ali|phd|phdHtm|47021-2.7142,79,131,164,200,229,262,316,360,394, 441 MLHISSCCRGKRLSRCFGPR
10332269811out7|ali|phd|phdHtm|451909.8134,83,111,169,206,235,264,327,373,408, 434 MGVVEWVGEWMHAVVWSFPM
11332332411out6|ali|phd|phdHtm|500707.2471,116,143,197,241,270,297,353,400,436, 462 MRGGNRRDPISCNGKMLCVT
12332315211out2|ali|phd|phdHtm|749303.8645,67,123,168,200,259,294,318,340,377, 424 MSGEYQSFTLKRARRVYDQY
13332247810in32|ali|phd|phdHtm|45092-12.2437,91,136,166,197,231,284,326,384,412 MKQGVFAAVFRIRELRARIF
14332279110in17|ali|phd|phdHtm|43380-8.0730,65,91,125,159,188,210,359,396,423 MRIRGVSDFDYLLLLTMLAL
15332240710in4|ali|phd|phdHtm|59340-4.4164,134,169,219,273,368,424,485,537,582 MPRCSSGITRINPMTTLLHP
16332231410in3|ali|phd|phdHtm|46911-1.23128,150,183,221,244,271,327,365,398,465 MNTRLPLRVLQCVLVGLLVC
17332248610in3|ali|phd|phdHtm|71531-3.8021,55,79,122,155,201,226,254,281,595 MGLLFFSYLFVAVFVFDVFC
18332261210in2|ali|phd|phdHtm|56650-5.2464,89,136,328,362,400,462,491,520,543 MLSTNAYSVTAAAACSTCGV
19332284910in2|ali|phd|phdHtm|39622-2.3138,61,98,143,184,218,252,297,334,358 MAGSAGFWLLAKLSGGMVCG
20332259910in1|ali|phd|phdHtm|40090-11.2167,89,126,165,200,260,310,332,356,388 MRRNRARARASHEWDAEKRD
21332309810in1|ali|phd|phdHtm|88881-9.0045,267,296,318,360,388,443,752,785,861 MWGRRMRCMKIPRQLTRRRL
22332229510out3|ali|phd|phdHtm|350020.1835,64,95,128,151,183,210,268,308,332 MHTQSLSPRQFMMKILNGSS
23332336410out2|ali|phd|phdHtm|341525.3833,64,102,134,163,210,239,277,306,336 MESFVRSALAARTLPTLLGV

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