--- -------------------------------------------------------------------------------- --- --- All proteins with at least 4 transmembrane helices in Treponema pallidum --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 59 3322335 6 in 15 273 8 5 -8.42 33,94,131,157,209,261 MNMIFLKWRTALVLCLLSCI PACVFTFAAAKYLVVGLTAV 60 3322334 6 in 12 296 9 4 -11.21 37,97,130,181,229,285 MGKSMSKPRDTVSAYCFSAP FLLTSLLTCIFILLTMRRQA 61 3322694 6 in 7 583 9 1 -11.19 26,435,458,480,535,559 MSKKARFGVVLVVLAACSGF DYGTEVLHKKTVRIGWRIAR 62 3322695 6 in 6 420 3 3 -3.36 31,150,280,309,376,402 MRQVVRFSLLFLPCAILSVV IAGGCIALISRGKSGGQLLG 63 3322805 6 in 4 466 1 9 -2.00 189,245,347,406,435,457 MRVIVVGCGTNGRELTRRLS LMFIVQSAQSEKIVALLGGT 64 3322954 6 in 4 299 8 5 -8.15 40,97,127,177,225,277 MSSRLRVARRRTVGSLGFWC LAESGACNTTPPPCGGRRSY 65 3322497 6 in 2 271 9 2 -10.96 105,127,149,180,226,257 MHRTEPTINCVHDGTRSLHL LVVLLAHHLAPTVRRHLYRH 66 3322577 6 in 1 313 8 3 -8.20 46,75,109,164,209,285 MGVIGTTVIAILHRAAPLAC RRGERRRSRLLFAYLQRVTC 67 3322629 6 in 1 276 1 0 -1.24 64,108,137,172,206,241 MFAWGRYTRCEGVGIRGACA SDTTRCLILPVTLRAGPTFR 68 3322768 6 in 1 214 1 2 -1.46 52,88,117,146,175,206 MVTVSIVEIFLIISLPLLFF LAGAGGVALLTHFFAVRINV 69 3322938 6 in 1 654 9 0 -11.52 81,112,155,184,228,267 MSTVRFCPTAMLPPSGEGLC IASENKNAMDMLTNQLTQLR 70 3322939 6 in 1 614 9 1 -10.65 43,65,112,143,190,224 MNTEHAVSDFAVLRRAVVMS IGQKNKDSITDLVTELSNMR 71 3323200 6 in 1 365 0 3 -0.91 25,70,112,288,310,345 MLDMFLPIFFLVLVCASMIL CAGFMQERQYRASSLRQSVC 72 3323304 6 in 1 208 6 3 -6.75 40,79,111,140,162,196 MSVIRKPFRYSYTNVTLSLV AWGYIRIRFGIKPLKVWSIV 73 3323311 6 in 1 294 1 1 -1.77 32,91,129,195,230,277 MAFTEKQKGTLCLMCSSFCF ALYVFARERERKEPTVPSHT 74 3323312 6 out 7 278 2 3 2.63 105,149,171,205,237,268 MLCMLEMDSARQRFVRDVEH LLLILSIQMCVEGARGIIAT 75 3322970 6 out 6 202 8 1 8.21 28,81,110,132,154,190 MSSVLSTLSALLSVYALLCT GFFVNVVVRYFLTGTLHVAV 76 3322362 6 out 4 264 9 5 12.19 33,69,105,152,184,231 MTSVPGVVGSFLAGLLSFLS GITPLRQIAALLAQWFLYQG 77 3322700 6 out 1 559 9 0 9.24 45,72,102,127,159,535 MLCTAPLVSSAASAVLLAFA TRRHSTTQAESSLQQIRGEH 78 3322865 6 out 1 678 9 1 19.21 247,281,370,406,437,475 MTRVCRALLFVLCGIFVHAQ VHATPEKNACIRDETVPNLQ 79 3323273 6 out 1 396 1 1 1.77 158,224,276,302,331,387 MKVVMDHQLTCLEFGSRRVV SIGAMIGSLISVPMLLMNLF 80 3323020 5 in 18 271 4 3 -4.12 30,92,129,232,258 MIRARACVRRALFFVSLFFF VLFVLVDGWNLLIDRLFHSF 81 3322894 5 in 3 450 6 1 -6.40 20,123,393,415,442 MIKIIIGVVVLGIVVLFHEL FAFVALIFLCAFWNDVNFLF 82 3322417 5 in 1 197 7 3 -7.22 40,78,100,141,165 MSKYTVKRASVLCIFGIGLF IVLWIFRSAGNDHTPSLRSE 83 3322561 5 in 1 263 9 3 -9.20 39,68,113,147,191 MLPYAEVILFLIKKHCIDCG CQMRAQSRAHTVGELFSPWK 84 3322628 5 in 1 233 3 9 -3.01 31,81,120,170,218 MCMVPVRRFIAVCAVTACAG KGSQYSMLVPVVVRLGAVYK 85 3323118 5 in 1 402 6 0 -6.19 96,174,208,319,379 MGALACDYTYSPSPKRDLSI DLFTEALVAYLDDRLHHMQS 86 3322529 5 out 6 216 6 3 6.69 25,57,107,154,188 MRLSDFYTALRLALVLPFFA ILKRVCGRTRYPVCKTCREW 87 3322383 5 out 3 219 9 6 11.93 39,81,106,162,207 MANQTLWLLVARATGQTSLM AQVALTQWIGRIICTRIRAR 88 3322824 5 out 2 454 9 1 9.03 273,309,331,373,444 MFRSQRMKFLELVVLERDVD SFWSVCASVCVRGFLKVLAC 89 3322950 5 out 2 144 4 4 4.46 25,47,71,104,137 MGTLRRFPASVLQIALALFL HHTAVDLLVLGALIFVRQHT 90 3322288 5 out 1 203 4 7 4.45 41,70,105,142,187 MSVFCLLLSFGRRCVAADNF TMLVLCYQSYRSFLTHTRND 91 3322416 5 out 1 192 6 3 6.91 30,53,83,130,175 MVTMVPPLFFVCALFFAEGI LYGTDELWLFPIPAAGMRTR 92 3322676 5 out 1 238 0 5 0.27 38,65,110,148,222 MLGAELADTGLFVRFGALHF MLVLYLPFRPSQHGRNQLFV 93 3322769 5 out 1 224 1 0 1.36 68,105,149,175,221 MTLSHPTREDRPSRRVLQLG IWAKYCCTSLVMVKIGPVFR 94 3322789 5 out 1 168 4 4 4.63 38,67,89,117,155 MIRLIAWSVGTSFLFSIVEM PFVFGLLNMFPTTFLYKRFS 95 3323088 5 out 1 214 2 4 2.55 30,79,121,161,184 MVHTLFSWVSAHIHSLPMVV KTTGDGVRITHDDVQTNVGV 96 3323026 4 in 9 259 8 4 -8.20 24,47,168,199 MDIASFIGLFGGFAIIIFGA RLLTYLSPKMRKELEMELIK 97 3323017 4 in 8 376 9 3 -10.10 72,124,186,226 MIEQEGTFPLPLFIIDLQWF NALVLIFTKLDKFKTHAQRK 98 3323300 4 in 8 197 9 3 -20.16 39,99,128,174 MIRSRPLRVDTMKLTRIQKE KQEKEISSQPSCNETGGVFR 99 3323084 4 in 6 224 1 9 -1.24 22,54,86,129 MITDSVIVVRLLLSFVSGLA KLNHEVHMLECVQQFVLQET 100 3323181 4 in 4 479 3 1 -3.51 51,212,323,364 MVRMRRRRACSSGGACGCAA IERATKLLQLNRQVYDFHFL 101 3323284 4 in 4 409 5 3 -5.74 40,299,356,391 MVGEDFLYALHTFNARRGRT FGSYPAFQAAGLDPIQSLED 102 3322485 4 in 1 489 8 0 -8.42 29,81,218,323 MIRRRLAIVKAGSFALLALF NFSADRTTHDDMTIVTVQVK 103 3322873 4 in 1 429 7 4 -7.97 53,286,340,411 MSNTHVQTLRWMCFMVRRLN ATYLATRKILLLKPAEVLRD 104 3323283 4 in 1 410 0 4 -0.74 40,302,358,390 MLEDIVNTLLYFRQRVLRTT FFGLKPALQASRLDPIIALA 105 3323177 4 out 4 408 0 0 0.40 43,178,312,345 MLRLPTARACITMGTMIRHT CTGAKASHYLSLGGAILLGR 106 3323135 4 out 2 301 9 1 10.35 57,106,135,167 MVSRRAQAGNMRELEHFVQS PFPHVDVRVQGACDAPRAET 107 3322284 4 out 1 453 2 0 2.31 23,110,144,250 MAYPFLVGLELMFLLVCSAL VLDRYVVSALVDTRACRSSV 108 3322500 4 out 1 228 1 4 1.64 47,83,121,162 MFFSLYERRQSLLHRAPPVA AQHPSLRRADFKVSDNILSS 109 3322619 4 out 1 162 3 2 3.64 18,67,99,121 MARVYILFFSVFFVFPLFSE VPDPIELVPLDSFVEGTDDS 110 3323307 4 out 1 459 6 0 6.28 43,75,128,313 MVLTQKNLVKRTTESTETEA LPHAQALSHHTVHAGGTYDR