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Transmembrane helices for trepa (Treponema pallidum)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
5933223356in15|ali|phd|phdHtm|27385-8.4233,94,131,157,209,261MNMIFLKWRTALVLCLLSCI
6033223346in12|ali|phd|phdHtm|29694-11.2137,97,130,181,229,285MGKSMSKPRDTVSAYCFSAP
6133226946in7|ali|phd|phdHtm|58391-11.1926,435,458,480,535,559MSKKARFGVVLVVLAACSGF
6233226956in6|ali|phd|phdHtm|42033-3.3631,150,280,309,376,402MRQVVRFSLLFLPCAILSVV
6333228056in4|ali|phd|phdHtm|46619-2.00189,245,347,406,435,457MRVIVVGCGTNGRELTRRLS
6433229546in4|ali|phd|phdHtm|29985-8.1540,97,127,177,225,277MSSRLRVARRRTVGSLGFWC
6533224976in2|ali|phd|phdHtm|27192-10.96105,127,149,180,226,257MHRTEPTINCVHDGTRSLHL
6633225776in1|ali|phd|phdHtm|31383-8.2046,75,109,164,209,285MGVIGTTVIAILHRAAPLAC
6733226296in1|ali|phd|phdHtm|27610-1.2464,108,137,172,206,241MFAWGRYTRCEGVGIRGACA
6833227686in1|ali|phd|phdHtm|21412-1.4652,88,117,146,175,206MVTVSIVEIFLIISLPLLFF
6933229386in1|ali|phd|phdHtm|65490-11.5281,112,155,184,228,267MSTVRFCPTAMLPPSGEGLC
7033229396in1|ali|phd|phdHtm|61491-10.6543,65,112,143,190,224MNTEHAVSDFAVLRRAVVMS
7133232006in1|ali|phd|phdHtm|36503-0.9125,70,112,288,310,345MLDMFLPIFFLVLVCASMIL
7233233046in1|ali|phd|phdHtm|20863-6.7540,79,111,140,162,196MSVIRKPFRYSYTNVTLSLV
7333233116in1|ali|phd|phdHtm|29411-1.7732,91,129,195,230,277MAFTEKQKGTLCLMCSSFCF
7433233126out7|ali|phd|phdHtm|278232.63105,149,171,205,237,268MLCMLEMDSARQRFVRDVEH
7533229706out6|ali|phd|phdHtm|202818.2128,81,110,132,154,190MSSVLSTLSALLSVYALLCT
7633223626out4|ali|phd|phdHtm|2649512.1933,69,105,152,184,231MTSVPGVVGSFLAGLLSFLS
7733227006out1|ali|phd|phdHtm|559909.2445,72,102,127,159,535MLCTAPLVSSAASAVLLAFA
7833228656out1|ali|phd|phdHtm|6789119.21247,281,370,406,437,475MTRVCRALLFVLCGIFVHAQ
7933232736out1|ali|phd|phdHtm|396111.77158,224,276,302,331,387MKVVMDHQLTCLEFGSRRVV
8033230205in18|ali|phd|phdHtm|27143-4.1230,92,129,232,258MIRARACVRRALFFVSLFFF
8133228945in3|ali|phd|phdHtm|45061-6.4020,123,393,415,442MIKIIIGVVVLGIVVLFHEL
8233224175in1|ali|phd|phdHtm|19773-7.2240,78,100,141,165MSKYTVKRASVLCIFGIGLF
8333225615in1|ali|phd|phdHtm|26393-9.2039,68,113,147,191MLPYAEVILFLIKKHCIDCG
8433226285in1|ali|phd|phdHtm|23339-3.0131,81,120,170,218MCMVPVRRFIAVCAVTACAG
8533231185in1|ali|phd|phdHtm|40260-6.1996,174,208,319,379MGALACDYTYSPSPKRDLSI
8633225295out6|ali|phd|phdHtm|216636.6925,57,107,154,188MRLSDFYTALRLALVLPFFA
8733223835out3|ali|phd|phdHtm|2199611.9339,81,106,162,207MANQTLWLLVARATGQTSLM
8833228245out2|ali|phd|phdHtm|454919.03273,309,331,373,444MFRSQRMKFLELVVLERDVD
8933229505out2|ali|phd|phdHtm|144444.4625,47,71,104,137MGTLRRFPASVLQIALALFL
9033222885out1|ali|phd|phdHtm|203474.4541,70,105,142,187MSVFCLLLSFGRRCVAADNF
9133224165out1|ali|phd|phdHtm|192636.9130,53,83,130,175MVTMVPPLFFVCALFFAEGI
9233226765out1|ali|phd|phdHtm|238050.2738,65,110,148,222MLGAELADTGLFVRFGALHF
9333227695out1|ali|phd|phdHtm|224101.3668,105,149,175,221MTLSHPTREDRPSRRVLQLG
9433227895out1|ali|phd|phdHtm|168444.6338,67,89,117,155MIRLIAWSVGTSFLFSIVEM
9533230885out1|ali|phd|phdHtm|214242.5530,79,121,161,184MVHTLFSWVSAHIHSLPMVV
9633230264in9|ali|phd|phdHtm|25984-8.2024,47,168,199MDIASFIGLFGGFAIIIFGA
9733230174in8|ali|phd|phdHtm|37693-10.1072,124,186,226MIEQEGTFPLPLFIIDLQWF
9833233004in8|ali|phd|phdHtm|19793-20.1639,99,128,174MIRSRPLRVDTMKLTRIQKE
9933230844in6|ali|phd|phdHtm|22419-1.2422,54,86,129MITDSVIVVRLLLSFVSGLA
10033231814in4|ali|phd|phdHtm|47931-3.5151,212,323,364MVRMRRRRACSSGGACGCAA
10133232844in4|ali|phd|phdHtm|40953-5.7440,299,356,391MVGEDFLYALHTFNARRGRT
10233224854in1|ali|phd|phdHtm|48980-8.4229,81,218,323MIRRRLAIVKAGSFALLALF
10333228734in1|ali|phd|phdHtm|42974-7.9753,286,340,411MSNTHVQTLRWMCFMVRRLN
10433232834in1|ali|phd|phdHtm|41004-0.7440,302,358,390MLEDIVNTLLYFRQRVLRTT
10533231774out4|ali|phd|phdHtm|408000.4043,178,312,345MLRLPTARACITMGTMIRHT
10633231354out2|ali|phd|phdHtm|3019110.3557,106,135,167MVSRRAQAGNMRELEHFVQS
10733222844out1|ali|phd|phdHtm|453202.3123,110,144,250MAYPFLVGLELMFLLVCSAL
10833225004out1|ali|phd|phdHtm|228141.6447,83,121,162MFFSLYERRQSLLHRAPPVA
10933226194out1|ali|phd|phdHtm|162323.6418,67,99,121MARVYILFFSVFFVFPLFSE
11033233074out1|ali|phd|phdHtm|459606.2843,75,128,313MVLTQKNLVKRTTESTETEA

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