--- -------------------------------------------------------------------------------- --- --- All proteins with at least 2 transmembrane helices in Treponema pallidum --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 137 3323019 2 in 11 94 7 9 -7.23 38,74 MMTQGAVLGLIREGVFQVVL LQNYTVRLFDIIPQLVRSGP 138 3322840 2 in 8 376 1 1 -1.95 230,257 MRKVNCIKVITRAHTLGYCG AGASGAVSPGAVRPFAVGSV 139 3322835 2 in 3 133 2 9 -2.17 24,73 MAVLSVMILSLLVVVCLLVV LSLLVLPQEFLGLWGSGSSV 140 3323030 2 in 3 159 9 6 -14.57 78,100 MRGTPAYHAVSGVPCSACTC AGEVGAMGLSSSAEVRPAQE 141 3322354 2 in 2 215 0 6 -0.54 109,176 MRTCPDCAAWCAYVDGEGSQ LSVIPVPSYVLNASKAQFFS 142 3322566 2 in 2 219 4 5 -4.60 83,198 MRADKGAVGTVAVVCAFDLS HICFALRSFLRALKQTLILL 143 3322718 2 in 2 256 9 4 -15.91 39,108 MIKRHMFAKRGVKGRSYLVR SEREGGEREVEDVPKVRGAG 144 3323138 2 in 2 273 2 3 -2.13 34,66 MLFLRSMVLWYAAYVRPLLD ETTTRAGHAQGTLDHGRSTL 145 3323146 2 in 2 271 8 4 -8.38 44,245 MCSMSWKSFIIPVRWRCMAG RTEYLGSEGVWIGAPVSKSS 146 3322585 2 in 1 321 6 2 -6.00 43,111 MHCLMQVPSRRDGALRVQRC GEAYRIAEKWFGVGQSVIGI 147 3322666 2 in 1 271 5 1 -5.38 52,135 MKKQFLCRNTEACKYPLVGY EWQTQRRIKELDVRGGTAVY 148 3322682 2 in 1 567 9 2 -12.00 43,490 MGEWLGQLGVKLKTQWKKWT NMAREHPEDVALLVRTWLME 149 3322777 2 in 1 845 5 1 -5.00 184,454 MCGATACGARICKAERQEHC ITQRSKQSISSLADEVEKFK 150 3322891 2 in 1 677 9 1 -14.00 96,376 MHDARTFFMRGSCTYAHPVA SKEEGNHLNRDFKALVDSVL 151 3322913 2 in 1 147 6 0 -6.43 91,131 MNAEAIYRQVLLEYARKQEH CATLSWHNADILLHHKKDTD 152 3323021 2 in 1 262 9 4 -19.08 45,133 MKTLGCVLRKFSRRENVLRT RKKLRRIPRNDSEESAAQDA 153 3323031 2 in 1 171 1 3 -1.97 43,74 MDVQERRFSCAAVGASLKVP TDLPETKRMARAIRTVLSQD 154 3323069 2 in 1 94 7 9 -7.49 23,58 MTYGKLIFFIIVLVGFALFM EDSPTSAPTGGVSSPEHVDV 155 3323116 2 in 1 498 1 2 -1.71 325,378 MPPACVGVRDGCIARGRERI LQSLGRQRTQNYSAHTAGAG 156 3323129 2 in 1 428 7 2 -7.07 110,412 MGAATTGFPIKAAVIHFTAL RSALALACLRARVRAPRTDV 157 3323188 2 in 1 221 2 4 -2.06 55,98 MNILAINTVAHALNVAAEGA AATPGERGAPQYTTRTYAKG 158 3323194 2 in 1 78 8 1 -8.55 49,71 MRSCPKRARGVHWATGAALW AGCGVLACVRAYGFPPYGSK 159 3323216 2 in 1 293 3 0 -3.00 38,238 MRPIVAAQRVTIQETRAVLA VITDDVEREQVASCVSAFLR 160 3323279 2 in 1 342 6 0 -6.75 161,229 MRTYFFMSVCSVLTCFGLYA PGMLNMTLYEKIKHLLYSAQ 161 3322729 2 out 12 342 1 4 1.71 65,145 MRAPAGCGVSRLRVNVCYLR LYFMVYKKNKPIDPAQAPRG 162 3323236 2 out 2 257 2 6 2.48 86,151 MDAEDQNNTLQTAAPCRRGE KDYDNITVPLGTGCIALLMS 163 3322441 2 out 1 227 7 8 7.89 35,171 MYFAILGTMSRTCVRAYAVF SRTDEAQVSPGTPPECPVSV 164 3322525 2 out 1 75 9 5 50.00 47,71 MSFPSLLFLGFSGVLAFGEV GIWLLLHPGIGRVLCLYLGA 165 3322541 2 out 1 217 0 0 0.34 28,80 MIGFPCRRVALLVARFLLPV NRDLADARRGRERVLRYVFR 166 3322584 2 out 1 342 4 0 4.10 30,325 MDDGPLRVVVLTSFVILVVV LTVGGKELFSGEVGALPHAG 167 3322618 2 out 1 180 5 0 5.07 139,179 MAITTAGDICALYPLCPILL SALCTAVHALWNAYAIAAAA 168 3322635 2 out 1 246 4 3 4.04 99,140 MCVAVCLVPVRNPFGASVYF ALCIDSAGSMRSYYSGEIAF 169 3322638 2 out 1 282 1 1 1.79 37,69 MLPCAVVNQRRRSALMCGIL VWRSETTCPQDECLTRASKD 170 3322670 2 out 1 319 1 1 1.60 37,92 MKSAQGWRRTFIRFAIHMRR ARQNKELVTNVSQRATRGDR 171 3322725 2 out 1 383 3 1 3.10 51,181 MDAVLTCLVDEKIGPGSLGS LYPRLAPAHAQEIARILGTL 172 3322771 2 out 1 477 1 1 1.71 131,425 MSDDSTPKTPSRRIRHTGRR TTRKRLQGVIFCLSATSLPC 173 3322815 2 out 1 159 7 5 7.84 82,126 MTISTLDLILGIIMGIVTVR VINTVLSPLVLDGVRYMRLK 174 3322844 2 out 1 434 6 1 6.50 280,314 MRQNGAVPMISCSVRRRPRW IERARRFLKLHEKLSLFDIL 175 3322988 2 out 1 307 9 1 14.00 150,173 MEAYQAEIIRRFGRVRRARG LEHYTQLCTFFLQEQEKEHH 176 3323066 2 out 1 391 3 1 3.81 280,325 MNTYAIVDIPEETHFSDDVY IFITRALSVKEQRLILQEGG 177 3323071 2 out 1 292 5 3 5.67 163,281 MNSNSNKKRDPARFPAGVAQ IAGGPGVDASISFLPYLKKK 178 3323247 2 out 1 476 0 0 0.34 72,396 MNKRDFPRIHFYDQDFVDIY GQKKKTLPIPSGKCSMLVDK 179 3323261 2 out 1 390 1 2 1.87 55,170 MALSVLDRAKRKFAQEKYGE HSQSGTVSGDRQGAAAVLKA 180 3323349 2 out 1 644 3 0 3.00 242,569 MVCSITLLKVRSKRHLLSYL LLQQQGKTVAARALLQRAQA