Bottom -
Previous -
Next -
CUBIC -
PP home
Transmembrane helices for trepa (Treponema pallidum)
Jinfeng Liu & Burkhard Rost
CUBIC Columbia Univ, Dept Biochem & Mol Biophysics
| num | id | nhtm | top | nali | ali|phd|phdHtm | len1 | riTop | riMod | topD | htmCN | seqN |
| 137 | 3323019 | 2 | in | 11 | |ali|phd|phdHtm| | 94 | 7 | 9 | -7.23 | 38,74 | MMTQGAVLGLIREGVFQVVL |
| 138 | 3322840 | 2 | in | 8 | |ali|phd|phdHtm| | 376 | 1 | 1 | -1.95 | 230,257 | MRKVNCIKVITRAHTLGYCG |
| 139 | 3322835 | 2 | in | 3 | |ali|phd|phdHtm| | 133 | 2 | 9 | -2.17 | 24,73 | MAVLSVMILSLLVVVCLLVV |
| 140 | 3323030 | 2 | in | 3 | |ali|phd|phdHtm| | 159 | 9 | 6 | -14.57 | 78,100 | MRGTPAYHAVSGVPCSACTC |
| 141 | 3322354 | 2 | in | 2 | |ali|phd|phdHtm| | 215 | 0 | 6 | -0.54 | 109,176 | MRTCPDCAAWCAYVDGEGSQ |
| 142 | 3322566 | 2 | in | 2 | |ali|phd|phdHtm| | 219 | 4 | 5 | -4.60 | 83,198 | MRADKGAVGTVAVVCAFDLS |
| 143 | 3322718 | 2 | in | 2 | |ali|phd|phdHtm| | 256 | 9 | 4 | -15.91 | 39,108 | MIKRHMFAKRGVKGRSYLVR |
| 144 | 3323138 | 2 | in | 2 | |ali|phd|phdHtm| | 273 | 2 | 3 | -2.13 | 34,66 | MLFLRSMVLWYAAYVRPLLD |
| 145 | 3323146 | 2 | in | 2 | |ali|phd|phdHtm| | 271 | 8 | 4 | -8.38 | 44,245 | MCSMSWKSFIIPVRWRCMAG |
| 146 | 3322585 | 2 | in | 1 | |ali|phd|phdHtm| | 321 | 6 | 2 | -6.00 | 43,111 | MHCLMQVPSRRDGALRVQRC |
| 147 | 3322666 | 2 | in | 1 | |ali|phd|phdHtm| | 271 | 5 | 1 | -5.38 | 52,135 | MKKQFLCRNTEACKYPLVGY |
| 148 | 3322682 | 2 | in | 1 | |ali|phd|phdHtm| | 567 | 9 | 2 | -12.00 | 43,490 | MGEWLGQLGVKLKTQWKKWT |
| 149 | 3322777 | 2 | in | 1 | |ali|phd|phdHtm| | 845 | 5 | 1 | -5.00 | 184,454 | MCGATACGARICKAERQEHC |
| 150 | 3322891 | 2 | in | 1 | |ali|phd|phdHtm| | 677 | 9 | 1 | -14.00 | 96,376 | MHDARTFFMRGSCTYAHPVA |
| 151 | 3322913 | 2 | in | 1 | |ali|phd|phdHtm| | 147 | 6 | 0 | -6.43 | 91,131 | MNAEAIYRQVLLEYARKQEH |
| 152 | 3323021 | 2 | in | 1 | |ali|phd|phdHtm| | 262 | 9 | 4 | -19.08 | 45,133 | MKTLGCVLRKFSRRENVLRT |
| 153 | 3323031 | 2 | in | 1 | |ali|phd|phdHtm| | 171 | 1 | 3 | -1.97 | 43,74 | MDVQERRFSCAAVGASLKVP |
| 154 | 3323069 | 2 | in | 1 | |ali|phd|phdHtm| | 94 | 7 | 9 | -7.49 | 23,58 | MTYGKLIFFIIVLVGFALFM |
| 155 | 3323116 | 2 | in | 1 | |ali|phd|phdHtm| | 498 | 1 | 2 | -1.71 | 325,378 | MPPACVGVRDGCIARGRERI |
| 156 | 3323129 | 2 | in | 1 | |ali|phd|phdHtm| | 428 | 7 | 2 | -7.07 | 110,412 | MGAATTGFPIKAAVIHFTAL |
| 157 | 3323188 | 2 | in | 1 | |ali|phd|phdHtm| | 221 | 2 | 4 | -2.06 | 55,98 | MNILAINTVAHALNVAAEGA |
| 158 | 3323194 | 2 | in | 1 | |ali|phd|phdHtm| | 78 | 8 | 1 | -8.55 | 49,71 | MRSCPKRARGVHWATGAALW |
| 159 | 3323216 | 2 | in | 1 | |ali|phd|phdHtm| | 293 | 3 | 0 | -3.00 | 38,238 | MRPIVAAQRVTIQETRAVLA |
| 160 | 3323279 | 2 | in | 1 | |ali|phd|phdHtm| | 342 | 6 | 0 | -6.75 | 161,229 | MRTYFFMSVCSVLTCFGLYA |
| 161 | 3322729 | 2 | out | 12 | |ali|phd|phdHtm| | 342 | 1 | 4 | 1.71 | 65,145 | MRAPAGCGVSRLRVNVCYLR |
| 162 | 3323236 | 2 | out | 2 | |ali|phd|phdHtm| | 257 | 2 | 6 | 2.48 | 86,151 | MDAEDQNNTLQTAAPCRRGE |
| 163 | 3322441 | 2 | out | 1 | |ali|phd|phdHtm| | 227 | 7 | 8 | 7.89 | 35,171 | MYFAILGTMSRTCVRAYAVF |
| 164 | 3322525 | 2 | out | 1 | |ali|phd|phdHtm| | 75 | 9 | 5 | 50.00 | 47,71 | MSFPSLLFLGFSGVLAFGEV |
| 165 | 3322541 | 2 | out | 1 | |ali|phd|phdHtm| | 217 | 0 | 0 | 0.34 | 28,80 | MIGFPCRRVALLVARFLLPV |
| 166 | 3322584 | 2 | out | 1 | |ali|phd|phdHtm| | 342 | 4 | 0 | 4.10 | 30,325 | MDDGPLRVVVLTSFVILVVV |
| 167 | 3322618 | 2 | out | 1 | |ali|phd|phdHtm| | 180 | 5 | 0 | 5.07 | 139,179 | MAITTAGDICALYPLCPILL |
| 168 | 3322635 | 2 | out | 1 | |ali|phd|phdHtm| | 246 | 4 | 3 | 4.04 | 99,140 | MCVAVCLVPVRNPFGASVYF |
| 169 | 3322638 | 2 | out | 1 | |ali|phd|phdHtm| | 282 | 1 | 1 | 1.79 | 37,69 | MLPCAVVNQRRRSALMCGIL |
| 170 | 3322670 | 2 | out | 1 | |ali|phd|phdHtm| | 319 | 1 | 1 | 1.60 | 37,92 | MKSAQGWRRTFIRFAIHMRR |
| 171 | 3322725 | 2 | out | 1 | |ali|phd|phdHtm| | 383 | 3 | 1 | 3.10 | 51,181 | MDAVLTCLVDEKIGPGSLGS |
| 172 | 3322771 | 2 | out | 1 | |ali|phd|phdHtm| | 477 | 1 | 1 | 1.71 | 131,425 | MSDDSTPKTPSRRIRHTGRR |
| 173 | 3322815 | 2 | out | 1 | |ali|phd|phdHtm| | 159 | 7 | 5 | 7.84 | 82,126 | MTISTLDLILGIIMGIVTVR |
| 174 | 3322844 | 2 | out | 1 | |ali|phd|phdHtm| | 434 | 6 | 1 | 6.50 | 280,314 | MRQNGAVPMISCSVRRRPRW |
| 175 | 3322988 | 2 | out | 1 | |ali|phd|phdHtm| | 307 | 9 | 1 | 14.00 | 150,173 | MEAYQAEIIRRFGRVRRARG |
| 176 | 3323066 | 2 | out | 1 | |ali|phd|phdHtm| | 391 | 3 | 1 | 3.81 | 280,325 | MNTYAIVDIPEETHFSDDVY |
| 177 | 3323071 | 2 | out | 1 | |ali|phd|phdHtm| | 292 | 5 | 3 | 5.67 | 163,281 | MNSNSNKKRDPARFPAGVAQ |
| 178 | 3323247 | 2 | out | 1 | |ali|phd|phdHtm| | 476 | 0 | 0 | 0.34 | 72,396 | MNKRDFPRIHFYDQDFVDIY |
| 179 | 3323261 | 2 | out | 1 | |ali|phd|phdHtm| | 390 | 1 | 2 | 1.87 | 55,170 | MALSVLDRAKRKFAQEKYGE |
| 180 | 3323349 | 2 | out | 1 | |ali|phd|phdHtm| | 644 | 3 | 0 | 3.00 | 242,569 | MVCSITLLKVRSKRHLLSYL |
Top -
Previous -
Next -
CUBIC -
PP home