--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in Treponema pallidum --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 181 3322977 1 in 15 352 4 3 -4.56 101 MNVLGIETSCDETAVAIVKD FSKRGGDRLAAQRSAASQPL 182 3322505 1 in 10 59 9 9 -9.97 50 MLKFAKFRRECVAEFRRVVW VMALFLGLIDALFVALLSFF 183 3323080 1 in 9 398 9 3 -20.19 31 MRNKVRVLAVVAALAAACAV TVLRGRRQHVVAVRLTERSD 184 3323325 1 in 5 799 7 1 -7.43 36 MERSPLPRIIALTFGTLLFV MEARGVVGPPNGSKPRDVLR 185 3323025 1 in 4 238 9 5 -17.65 38 MARKRRAPRGAAQGWLTTYS SPEGRAYNRRVDIVILDEGH 186 3322377 1 in 3 331 9 4 -19.33 36 MRKRGLQVHARVRPVLNIGI LPDTEKILSTDLEYFKHLYQ 187 3322733 1 in 3 176 9 7 -15.71 42 MIQTLVLRDTPRLESCRRGG KSPSEYDDKFDVQFQSPEFS 188 3322780 1 in 3 344 1 5 -1.27 38 MSIRTFSFTPSVRLRRIVLW QRARTRSPRRWTSMIKLGSC 189 3322422 1 in 2 371 9 3 -14.18 40 MSVYCRSSKQTVREPCRPVP TIYKNGSAINPTSLLRMRTL 190 3322449 1 in 2 235 9 5 -17.21 42 MFARWRRYSYLARREARRNA STQIKAKAFMRYFPFGAFGV 191 3322859 1 in 2 206 8 7 -8.77 32 MRRNSRTMAKIVALLALILL MPPDRAAEIQRKMANKPADF 192 3322919 1 in 2 779 9 1 -18.00 289 MRARVRRSRQSACTSSGRRF ENNLAVDATLSLGMILKTPR 193 3322920 1 in 2 476 1 2 -1.56 54 MGVSCLTRAASFSNQCRFPF PSDTHANKAKNRRVEITILR 194 3323246 1 in 2 512 1 2 -2.00 77 MVLTLCVCALLFCLRRKYVH SHILGVASFRFWPPSRIGTP 195 3322280 1 in 1 88 8 9 -8.00 83 MDDARYAEWSASLVQLPDTH LFISVVMCVPRATLELLTIF 196 3322297 1 in 1 310 4 4 -4.00 172 MSQEIGIKLADGSFFPLFTA FNRLKNPDHIVAGTSIEIPS 197 3322307 1 in 1 342 6 3 -6.52 72 MYALCAACTRSRSAPGRRRP HIGSDVVDPGKYLNVKTAGA 198 3322398 1 in 1 69 9 9 -17.02 65 MEPRMSGSNLRFPYSRAYGG ALQFKLFLLSRLFFIFTSHI 199 3322537 1 in 1 448 9 3 -12.67 36 MCYYRYVQVHSIWRRFCALG RRSVSPVVLYFAPEGHAEPQ 200 3322568 1 in 1 534 4 2 -4.00 163 MLALDEGGSGRLNADYLIDV LGDTMEVYAIKQGDAHGSAS 201 3322573 1 in 1 270 9 5 -14.18 41 MHSDAQGCFRRVNMEQKRIL KSIREIAEFSGCYVFQERVK 202 3322610 1 in 1 230 9 4 -19.25 34 MRRRRRFLTLCACAVHLLPL TRFLYDVPPTANVVHNFLFA 203 3322866 1 in 1 406 1 2 -1.86 46 MMTTVRVILQRCARGICSNK GSHELPATKGMERARHASTR 204 3323029 1 in 1 226 8 5 -8.51 57 MGAERVGRAPGVNAKRAVQT DRKNTAIAQDKSERKKVQRD 205 3323044 1 in 1 398 6 3 -6.18 29 MKVLDMGRHGLFLLLIFFML GIDFTLILGKDFNGYLVKEG 206 3323094 1 in 1 377 9 3 -13.00 42 MKEIARHCTFSPMKIKEKKG EKKFFLSIDMLLARIDIAGI 207 3323250 1 in 1 246 8 5 -8.50 34 MKSFYFGRGALASTGGCVVL CITFPCSPTPRKRTRAARHA 208 3323286 1 in 1 320 5 3 -5.43 32 MTTAQKLLHRKSTIAMVVGI VKIISGLGAGDRVKDQSAAR 209 3323314 1 in 1 1033 8 1 -8.00 488 MPSAQHLSEFARELKTLGNE YDDIPLLLEHEEPPIQKEQE 210 3323323 1 out 9 598 0 2 0.22 36 MYSLRVLFRRLLRGLNAVRL LLQLDLSKGTYVYEPLRLHW 211 3322311 1 out 6 351 4 3 4.36 203 MMESSTILQRRALFNEAGDI TDFFEAKSTAYAKSSAMVDD 212 3322375 1 out 4 328 2 3 2.22 36 MRIPKWTPATWSVVAGCIGG LLTLKDISKVSKKVVAGTRE 213 3323175 1 out 4 546 2 2 2.64 248 MRPARCVLYTGRAPCGSKTS HLHFSVFKNGSVVNPLKILT 214 3323065 1 out 2 652 1 2 1.74 57 MSAPTSFRVHPWDASLPCTG EQHPPAGTPLTKGMTIELKL 215 3322275 1 out 1 707 9 2 14.00 490 MRKCAMRIMRRLMLFLMCLC FRQYEDPAVRLNNLLTSIEY 216 3322277 1 out 1 236 4 5 4.00 87 MKRFALIGLGDFGLSMLKEL QDKLAHTHSFSDFFKQWFLT 217 3322292 1 out 1 92 4 9 4.00 87 MDLGQRVVRVIPLAPLPVRV CFLVSGLSRAFLVYFLSVIR 218 3322327 1 out 1 191 0 6 0.62 133 MLPTAQRRLRGYIRACAPYG DTSADASHVVSQDEIDELLE 219 3322473 1 out 1 147 9 8 13.00 139 MRIYLRVVLPLSLALNSYGV VGFFVVLLQLLWGSARAYFK 220 3322534 1 out 1 594 9 1 16.00 234 MPIRFRCLLRRRSFSLGCTV AEAWARPLPHLGTADIPSQG 221 3322565 1 out 1 239 1 6 1.91 42 MHEQRRGIVRVDRFLELHRR GWAALGKSRAIAISVGGGRA 222 3322611 1 out 1 405 9 3 12.00 117 MPDIGELLKTTRERKHLSLE DIKWIKDEDAGRFKFVVMEV 223 3322690 1 out 1 177 3 6 3.14 121 MKVYIHPAEQHTQRTSYLLC LFHGHGPPSSYTRARTQRAS 224 3322750 1 out 1 487 6 2 6.00 28 MNNVHKTFIALAAGLVLLLA QARFLYASCLQRKKQGVWIL 225 3322757 1 out 1 290 9 5 12.30 47 MSQVLTVLHALSSPPWICLL RFISQPHRLYPEDALSEQAP 226 3322760 1 out 1 469 9 3 14.00 36 MAHLTFLLGCATMGGMSAYM ENRPLELLGKNELERLLDAS 227 3322786 1 out 1 329 7 4 7.78 55 MTESGLPVLCFFRVSMEFLL WRRALRLNPLHEPTRVKLNL 228 3322825 1 out 1 341 2 3 2.29 306 MAVERDVADVFVYAKLSGLC CIHAGSARTLPREFLGEAAY 229 3322936 1 out 1 274 2 5 2.00 173 MDLGMTMAGFLRGLWCVVGT QGDWEQVASQTGPGHSPYRA 230 3323013 1 unk 1 190 0 6 0.00 20 MLVMSITFSFVAVALLVYFY FIAEKTGKPLGEVQLLINLS 231 3323024 1 out 1 182 1 9 1.67 52 MAEKDSIGDIADDFEEQLVA NVLSRSKVKDIRFTQFDVLK 232 3323056 1 out 1 344 6 3 6.91 73 MVSASSFYVPAAVKKNFNAL GASSRFEVFLHGSPDTVLNL 233 3323197 1 out 1 316 2 3 2.57 32 MRSVDSRSSVTRWVCLTSVI QTETGMSSLQQFDTEENLIS 234 3323234 1 unk 1 444 0 3 0.00 21 MSSAVIVFFVVMLALSSIML EGRPMDLYDKNRLTRILNSI 235 3323327 1 out 1 222 9 5 12.00 31 MCYLAAVFLTLCTKSAMAGD EKHGYAPDGASVRYMVEACR