--- -------------------------------------------------------------------------------- --- --- All proteins with at least 10 transmembrane helices in Thermotoga maritima --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 1 ae001769_11 15 out 1 452 0 0 0.32 18,43,85,114,136,160,192,219,248,291,334,369,400,422,452 MIFLVYNFLIISLGIVFLFL DFESMLGVYLLGVVVCLFLS 2 ae001778_8 14 out 1 626 3 0 3.75 24,46,83,129,170,214,257,290,347,386,424,467,523,624 MALGLLPLVLLTLSIFIYLV SSSAYTFWVVVTLLLVFWVR 3 ae001734_6 13 in 8 461 8 1 -8.09 57,99,131,153,181,224,246,285,335,370,392,429,459 MRKSKQSTGSRDPLKFFISE VHWFTWILALAFALWLLFIK 4 ae001768_14 13 in 4 495 5 0 -5.60 34,58,98,160,205,227,259,292,314,343,423,445,477 MTSTKYRLKVIFWYVGQLLI AIVRIIRDVKILLEERGGVN 5 ae001736_3 13 out 1 479 0 0 0.44 35,64,109,181,203,238,268,319,347,370,399,435,459 MTPNERDLLKKYISFSLGTW SEFLKVVSIGVEFLKTTFHR 6 ae001778_7 13 out 1 466 3 1 3.52 18,40,87,125,164,196,236,263,296,320,358,392,433 MISLLVAVPLLAAFVSLFWK KALLDTESYVNGVFSAVKGG 7 ae001804_14 12 in 4 422 7 0 -7.72 41,72,110,132,173,195,257,296,333,355,386,410 MRIDEIVEKYVDRKTQRRFL AMFAGVIVLIFGRETKGKYV 8 ae001717_5 12 in 2 1000 9 0 -11.09 31,352,376,398,450,474,529,859,889,911,956,990 MKIAEISSKRPIAIFMLLMA MLFTLFVIPVIYAAIRRKVR 9 ae001810_7 12 in 2 458 9 2 -9.98 46,76,120,156,198,220,265,299,343,384,409,438 MVLERETIGIKLLRGDPRKA TFNWGRFTVKHLKRDFQKNI 10 ae001731_5 12 in 1 459 9 0 -13.04 34,59,100,122,167,189,229,259,293,322,357,388 MKKAYLFLTLEGVFSLFYAL RLVRRSKRRKSNTDEQGGEQ 11 ae001746_4 12 in 1 415 9 1 -13.37 40,67,116,138,171,198,255,283,318,340,378,403 MKRLTEKDYRWNFIVNSLDY VFGIFYVVKFIVDPRVSNKN 12 ae001748_13 12 in 1 464 9 2 -12.41 47,82,119,162,193,224,271,300,348,380,414,440 MRYSLFKNYLPKEEVPEIRK FLSGKWEKRAVLTRERVKEL 13 ae001749_2 12 in 1 674 7 0 -7.54 26,212,239,263,305,329,371,549,574,596,638,660 MRRYLFTTTYVVLVFLSFFV GVGAIFTLIVQPMILEKREN 14 ae001695_6 12 out 6 473 4 0 4.81 48,104,146,181,203,235,272,313,347,388,432,457 MSSIKKTLAFSLGTFFSRIT VLFSKLLKIEELEEILRRGS 15 ae001765_1 12 out 5 421 1 0 1.40 21,43,78,110,150,193,252,274,296,335,378,418 MNEAMLVLLFAILAYYFIIF VAWSFMFIPFIIATLYSLII 16 ae001757_8 12 out 4 425 0 2 0.14 21,43,70,112,150,193,243,265,294,333,385,421 MFEDAVVSLLIFIIVYLFII IGFPVLILSLLVSGVYLLIR 17 ae001737_6 12 out 1 418 5 0 5.34 44,71,95,127,152,174,197,234,274,344,366,406 MNEMSSHMLSMEKQLYKTKR SYIAFIAGISLYLYNKVVNE 18 ae001764_1 12 out 1 422 6 0 6.41 18,57,86,114,147,174,237,269,298,326,372,399 MAVIFILILMVLLNADQMVM AKDVERLQKTMIELAKNSQT 19 ae001708_17 11 in 5 402 4 1 -4.81 19,56,98,126,155,191,220,257,302,352,395 MTILIIAGILGFIMAFSIGA VPTVAATSAAVYWVLKLILK 20 ae001702_7 11 in 3 726 2 0 -2.62 80,102,143,305,345,379,441,516,559,641,721 MYVAALFFLIPLVALGFAAA IKIMSVVSVIAVSIFKHVHL 21 ae001748_4 11 in 1 1065 9 0 -12.43 76,109,139,184,214,236,274,387,415,439,473 MEILFYVMYVVVALFSSRKL EQVLERLKKSEEFLKTIEEG 22 ae001762_6 11 in 1 365 3 2 -3.80 28,63,104,132,160,208,230,266,298,337,362 MRNLATFILIALIFVAFYFV FTYFGLVVVFSTLFGMIYGV 23 ae001720_1 11 out 20 435 9 1 9.44 51,87,128,155,190,231,262,289,312,350,399 MRKRVFSLLLVLAFLSVGFA GLDIEEHGMEGYADFEIFTT 24 ae001749_4 11 out 12 399 4 1 4.58 41,81,106,147,176,198,230,314,336,368,391 MEFEGAVTKVSGWRWFLLAL KGIGLAALVGIFLNLILPDR 25 ae001714_2 11 out 9 427 1 2 1.06 25,67,110,162,188,234,256,291,335,379,418 MIIVLIAFAVFLMLGMPVAF AILIVIFFPQIVLFIPNLIF 26 ae001764_12 11 out 8 381 3 2 3.31 34,64,95,117,169,224,255,285,309,344,370 MLQFLLCKGGSFVRYRLMSI LVPMIVSLFVFLFLRKYERA 27 ae001725_10 11 out 1 382 0 1 0.24 21,50,72,120,151,184,224,267,305,349,380 MNTLSVLLSLFTVIVVQRVF KVFLPLVLTLILGALVLGVI 28 ae001742_3 11 out 1 852 0 0 0.56 35,259,313,361,415,437,475,526,743,791,833 MILKIALRNFTKNLKISLVV MVIPSLMMSKLSPLEAMKEG 29 ae001747_19 11 out 1 488 0 1 0.46 55,94,140,175,206,228,254,325,385,409,475 MSASSQSSEGDGSPQTISMR SVFGFIWAFKRIVFRAERLE 30 ae001766_10 11 out 1 436 1 0 1.12 27,53,101,151,179,233,259,302,324,362,389 MNISIIEGALAVLINQFFGG SGTVPWIRERLNTLNIFRRK 31 ae001775_6 11 out 1 374 9 0 11.27 42,71,124,146,174,200,229,265,296,329,357 MKGESFASTKNRTRYSRAKC EILLKLSRILPKPVRKIVIG 32 ae001788_3 11 out 1 390 6 1 6.88 30,58,85,108,174,231,271,309,331,356,380 MNRNLLLFASGSFVSLIGTR ITTSMALIAGGVLISLQRFE 33 ae001793_9 11 out 1 458 1 2 1.83 43,76,119,144,171,206,240,279,337,383,419 MAGKSFDLLFSRNNLFSDVL KQPLGLEKVKKTSWKPKEMI 34 ae001798_11 10 in 33 431 9 2 -12.55 36,93,139,171,202,232,287,323,381,404 MWQAFKNAFKIPELRDRIIF THMVMRHYEGFIKKGKIRGR 35 ae001758_12 10 in 17 331 9 2 -14.26 39,73,95,130,153,195,242,274,297,320 MQVERSRAKISWYQRISRYQ AKGFIIIAAVIAEKLGRGEK 36 ae001753_17 10 in 6 384 5 2 -6.00 50,73,107,139,162,189,241,285,312,380 MILNTKGVEKLSIISALANF PNVAGVIGSATVAGVFLMFL 37 ae001756_1 10 in 4 309 4 1 -4.90 18,52,91,115,145,178,215,254,276,302 MFVLLLPSLFLGWSLGANDA GWFLTPAVSGTLSFLLTSLI 38 ae001743_8 10 in 3 309 9 3 -10.04 21,49,90,119,141,184,213,251,280,306 MAFLLTALGIAILVIGANWL FEGAVFLIIYSVYVYFVVLR 39 ae001763_6 10 in 3 293 9 2 -15.41 25,52,85,110,137,159,194,223,254,277 MDLRVLLSGLAYSTIFGLSF SSLIIMSLRRSYKRLSRAQK 40 ae001699_1 10 in 2 384 0 0 -0.66 26,55,100,158,181,233,261,301,344,373 MSRKKAFLFIVLLGLVSLFA FSFVIQFAAALLLLRMKRYE 41 ae001760_11 10 in 2 332 1 0 -1.01 21,57,89,119,174,211,235,257,297,323 MVWTGLLIGVLFGVILQRGR ASIFFILGNWTMAWFLFGRQ 42 ae001715_4 10 in 1 413 3 1 -3.56 40,63,106,154,183,242,309,335,374,402 MNEILHWKRNFFLLALGRFV ALSFLVAVLLLVALRGKELP 43 ae001774_5 10 in 1 324 6 2 -6.90 35,58,88,120,150,181,219,252,286,308 MNFIQKMASHFSKNMLFYTL IIFLMSYLHLSERIQKWWSK 44 ae001751_1 10 out 16 340 9 0 10.87 18,46,72,107,130,159,181,261,298,327 MSILMLFGLATLRSATYGEN FSILVGLILKGIALARVEKK 45 ae001721_8 10 out 1 296 9 2 10.76 22,51,79,111,135,167,194,236,258,290 MLYTTFSAIIPSFLIILIGY TTFFAIFTLPVWAVILESIF 46 ae001811_8 10 out 1 288 9 2 10.79 20,49,75,102,125,155,185,210,242,267 MVKALFSLLFVAFIWGSTFP ERVKIVRDANQKGRDECEDS