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Transmembrane helices for thema (Thermotoga maritima)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
1ae001769_1115out1|ali|phd|phdHtm|452000.3218,43,85,114,136,160,192,219,248,291, 334,369,400,422,452 MIFLVYNFLIISLGIVFLFL
2ae001778_814out1|ali|phd|phdHtm|626303.7524,46,83,129,170,214,257,290,347,386, 424,467,523,624 MALGLLPLVLLTLSIFIYLV
3ae001734_613in8|ali|phd|phdHtm|46181-8.0957,99,131,153,181,224,246,285,335,370, 392,429,459 MRKSKQSTGSRDPLKFFISE
4ae001768_1413in4|ali|phd|phdHtm|49550-5.6034,58,98,160,205,227,259,292,314,343, 423,445,477 MTSTKYRLKVIFWYVGQLLI
5ae001736_313out1|ali|phd|phdHtm|479000.4435,64,109,181,203,238,268,319,347,370, 399,435,459 MTPNERDLLKKYISFSLGTW
6ae001778_713out1|ali|phd|phdHtm|466313.5218,40,87,125,164,196,236,263,296,320, 358,392,433 MISLLVAVPLLAAFVSLFWK
7ae001804_1412in4|ali|phd|phdHtm|42270-7.7241,72,110,132,173,195,257,296,333,355, 386,410 MRIDEIVEKYVDRKTQRRFL
8ae001717_512in2|ali|phd|phdHtm|100090-11.0931,352,376,398,450,474,529,859,889,911, 956,990 MKIAEISSKRPIAIFMLLMA
9ae001810_712in2|ali|phd|phdHtm|45892-9.9846,76,120,156,198,220,265,299,343,384, 409,438 MVLERETIGIKLLRGDPRKA
10ae001731_512in1|ali|phd|phdHtm|45990-13.0434,59,100,122,167,189,229,259,293,322, 357,388 MKKAYLFLTLEGVFSLFYAL
11ae001746_412in1|ali|phd|phdHtm|41591-13.3740,67,116,138,171,198,255,283,318,340, 378,403 MKRLTEKDYRWNFIVNSLDY
12ae001748_1312in1|ali|phd|phdHtm|46492-12.4147,82,119,162,193,224,271,300,348,380, 414,440 MRYSLFKNYLPKEEVPEIRK
13ae001749_212in1|ali|phd|phdHtm|67470-7.5426,212,239,263,305,329,371,549,574,596, 638,660 MRRYLFTTTYVVLVFLSFFV
14ae001695_612out6|ali|phd|phdHtm|473404.8148,104,146,181,203,235,272,313,347,388, 432,457 MSSIKKTLAFSLGTFFSRIT
15ae001765_112out5|ali|phd|phdHtm|421101.4021,43,78,110,150,193,252,274,296,335, 378,418 MNEAMLVLLFAILAYYFIIF
16ae001757_812out4|ali|phd|phdHtm|425020.1421,43,70,112,150,193,243,265,294,333, 385,421 MFEDAVVSLLIFIIVYLFII
17ae001737_612out1|ali|phd|phdHtm|418505.3444,71,95,127,152,174,197,234,274,344, 366,406 MNEMSSHMLSMEKQLYKTKR
18ae001764_112out1|ali|phd|phdHtm|422606.4118,57,86,114,147,174,237,269,298,326, 372,399 MAVIFILILMVLLNADQMVM
19ae001708_1711in5|ali|phd|phdHtm|40241-4.8119,56,98,126,155,191,220,257,302,352, 395 MTILIIAGILGFIMAFSIGA
20ae001702_711in3|ali|phd|phdHtm|72620-2.6280,102,143,305,345,379,441,516,559,641, 721 MYVAALFFLIPLVALGFAAA
21ae001748_411in1|ali|phd|phdHtm|106590-12.4376,109,139,184,214,236,274,387,415,439, 473 MEILFYVMYVVVALFSSRKL
22ae001762_611in1|ali|phd|phdHtm|36532-3.8028,63,104,132,160,208,230,266,298,337, 362 MRNLATFILIALIFVAFYFV
23ae001720_111out20|ali|phd|phdHtm|435919.4451,87,128,155,190,231,262,289,312,350, 399 MRKRVFSLLLVLAFLSVGFA
24ae001749_411out12|ali|phd|phdHtm|399414.5841,81,106,147,176,198,230,314,336,368, 391 MEFEGAVTKVSGWRWFLLAL
25ae001714_211out9|ali|phd|phdHtm|427121.0625,67,110,162,188,234,256,291,335,379, 418 MIIVLIAFAVFLMLGMPVAF
26ae001764_1211out8|ali|phd|phdHtm|381323.3134,64,95,117,169,224,255,285,309,344, 370 MLQFLLCKGGSFVRYRLMSI
27ae001725_1011out1|ali|phd|phdHtm|382010.2421,50,72,120,151,184,224,267,305,349, 380 MNTLSVLLSLFTVIVVQRVF
28ae001742_311out1|ali|phd|phdHtm|852000.5635,259,313,361,415,437,475,526,743,791, 833 MILKIALRNFTKNLKISLVV
29ae001747_1911out1|ali|phd|phdHtm|488010.4655,94,140,175,206,228,254,325,385,409, 475 MSASSQSSEGDGSPQTISMR
30ae001766_1011out1|ali|phd|phdHtm|436101.1227,53,101,151,179,233,259,302,324,362, 389 MNISIIEGALAVLINQFFGG
31ae001775_611out1|ali|phd|phdHtm|3749011.2742,71,124,146,174,200,229,265,296,329, 357 MKGESFASTKNRTRYSRAKC
32ae001788_311out1|ali|phd|phdHtm|390616.8830,58,85,108,174,231,271,309,331,356, 380 MNRNLLLFASGSFVSLIGTR
33ae001793_911out1|ali|phd|phdHtm|458121.8343,76,119,144,171,206,240,279,337,383, 419 MAGKSFDLLFSRNNLFSDVL
34ae001798_1110in33|ali|phd|phdHtm|43192-12.5536,93,139,171,202,232,287,323,381,404 MWQAFKNAFKIPELRDRIIF
35ae001758_1210in17|ali|phd|phdHtm|33192-14.2639,73,95,130,153,195,242,274,297,320 MQVERSRAKISWYQRISRYQ
36ae001753_1710in6|ali|phd|phdHtm|38452-6.0050,73,107,139,162,189,241,285,312,380 MILNTKGVEKLSIISALANF
37ae001756_110in4|ali|phd|phdHtm|30941-4.9018,52,91,115,145,178,215,254,276,302 MFVLLLPSLFLGWSLGANDA
38ae001743_810in3|ali|phd|phdHtm|30993-10.0421,49,90,119,141,184,213,251,280,306 MAFLLTALGIAILVIGANWL
39ae001763_610in3|ali|phd|phdHtm|29392-15.4125,52,85,110,137,159,194,223,254,277 MDLRVLLSGLAYSTIFGLSF
40ae001699_110in2|ali|phd|phdHtm|38400-0.6626,55,100,158,181,233,261,301,344,373 MSRKKAFLFIVLLGLVSLFA
41ae001760_1110in2|ali|phd|phdHtm|33210-1.0121,57,89,119,174,211,235,257,297,323 MVWTGLLIGVLFGVILQRGR
42ae001715_410in1|ali|phd|phdHtm|41331-3.5640,63,106,154,183,242,309,335,374,402 MNEILHWKRNFFLLALGRFV
43ae001774_510in1|ali|phd|phdHtm|32462-6.9035,58,88,120,150,181,219,252,286,308 MNFIQKMASHFSKNMLFYTL
44ae001751_110out16|ali|phd|phdHtm|3409010.8718,46,72,107,130,159,181,261,298,327 MSILMLFGLATLRSATYGEN
45ae001721_810out1|ali|phd|phdHtm|2969210.7622,51,79,111,135,167,194,236,258,290 MLYTTFSAIIPSFLIILIGY
46ae001811_810out1|ali|phd|phdHtm|2889210.7920,49,75,102,125,155,185,210,242,267 MVKALFSLLFVAFIWGSTFP

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