--- -------------------------------------------------------------------------------- --- --- All proteins with at least 7 transmembrane helices in Thermotoga maritima --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 47 ae001694_9 9 in 19 322 2 3 -2.74 22,70,104,129,159,204,254,291,315 MRKLVFPILILSFLLGIFFG VGVVTALIGAPFLAFLMKRG 48 ae001704_3 9 in 18 344 3 3 -3.04 33,82,114,151,178,225,274,312,334 MVIYKNYVARRILTILFLSF IVTSFLGAPLFIYLLLHGEE 49 ae001707_13 9 in 7 302 0 1 -0.64 18,72,119,146,177,199,224,246,297 MIAANFLLNLFLYPILIKLF VFTVFNLISSLVALEIFGVI 50 ae001748_3 9 in 6 307 8 0 -8.48 19,71,116,158,180,202,226,268,296 MAFLLSFLLSLFGVWFFGRV FVLAVVFSFVLIKGLGLLHY 51 ae001771_6 9 in 3 359 4 3 -4.71 34,60,82,134,156,194,243,284,332 MMKMEKKLSARTNFILTVVF ELTWNNLYRWLFARRRGGEE 52 ae001733_8 9 in 2 301 0 2 -0.40 25,47,89,139,161,188,222,249,272 MILERFFAWLVVVFWGISFL TEDSTRGMRKDRTEETRPSA 53 ae001784_10 9 in 1 694 0 1 -0.71 35,210,242,264,346,392,568,621,679 MFEKYTSFVFKNRKRIFALV TMTVSSFMSLVILPKLLEAK 54 ae001707_11 9 out 17 364 0 3 0.35 26,60,89,123,165,203,288,327,352 MNEKSLVFFVIVLLCVGFIS LLSIMIGFGIVGNMILESER 55 ae001697_6 9 out 16 317 9 3 9.64 33,62,112,135,180,229,260,283,306 MASKFKKRTFRELGPLVALV IGIVIVVAVTLDILRRRLAS 56 ae001734_8 9 out 11 420 5 1 5.42 37,98,147,169,218,249,302,348,407 MKPSKKLREAVLAYLFLLPS IILIFTFIQYRVGRRAVEYV 57 ae001777_4 9 out 11 577 5 1 5.81 30,52,81,284,360,394,449,498,563 MKNIVKLFLWFLLAILNIAL LVGGISFVNFKLSGAFEEVS 58 ae001696_12 9 out 2 344 5 3 5.07 34,76,100,124,157,204,257,303,332 MNNRVWSFLVPFFSVIIALL IFLVAADRIVKTLLRFRKVK 59 ae001789_5 9 out 1 338 2 0 2.62 40,84,106,163,185,219,249,289,318 MKEFRKILEDKAFFFTTLYI PLALFFKVFWRKFLRPLFEA 60 ae001792_1 9 out 1 335 9 0 10.62 55,87,134,168,190,242,269,291,319 MKRNLLLALIIGLGATALIV ILGILLGLGRLTKKPEERSS 61 ae001816_7 9 out 1 273 1 2 1.02 21,43,79,105,127,159,194,222,266 MKPVFYPLLSVLVASFSGIL FFEIIGFIVAMIGLVLFILK 62 ae001778_9 8 in 27 293 8 2 -8.85 21,80,109,150,181,221,250,291 MIKALFNLVLAFFLVLSLEG WGVPLGLAFLNALFVVLGLT 63 ae001701_4 8 in 9 293 9 3 -16.88 26,63,99,137,164,224,249,281 MKKILAFLLIAAGSTLFFVF ILLGFTGFLILRSSQEPKRA 64 ae001801_18 8 in 5 291 6 0 -6.83 18,66,99,121,156,183,208,276 MWEAIISFFLTSVLSVFAKK LCCVLLFTYCVLQRGNGNLK 65 ae001692_2 8 in 4 669 6 0 -6.02 307,366,441,470,534,578,626,664 MPVKSLTRRSEISQKIVKVA SIAYVLSLIVFYVGKLVVML 66 ae001815_12 8 in 4 421 5 2 -5.55 56,83,208,248,284,324,353,404 MCEGHTRNDPCERRHDPGAR LLFLSPDIRDIFRKISGRAI 67 ae001708_4 8 in 3 318 4 2 -4.76 46,68,104,139,214,252,283,305 MKLISAYAPHLREEDDVRKI NALVPLIDRYTRPRIFGEVK 68 ae001775_5 8 in 2 324 4 1 -4.53 40,82,123,151,217,260,285,312 MKNLKNKHFALLYLVLFLVL LIALPFLIFLKNFWKQYVMG 69 ae001793_5 8 in 2 256 4 0 -4.61 39,78,103,132,161,188,210,247 MAAFVTMIYRQFMRFLRSRS SILMLVGLILAMESFERARI 70 ae001696_9 8 in 1 622 9 0 -37.47 22,275,297,323,345,556,578,612 MKKWIFLFLLFLVVPVLSYA FLIFVSLFLLYKNFMKRRVK 71 ae001707_7 8 in 1 285 9 2 -13.12 47,73,100,129,163,189,229,280 MEFSVIILIGYLTKKFFERD LITFFTIVSTSIIMAVNYTW 72 ae001718_10 8 in 1 361 5 0 -5.03 39,116,189,230,272,302,324,352 MRHLVVSILKNDYFRTKSVL VWIVLSFVLFFLNWRRVMMV 73 ae001743_12 8 in 1 276 7 1 -7.70 45,74,104,160,189,212,243,265 MWRENKALAFLVLTAVLQGS GGILVLVALFTGTTLRPRES 74 ae001760_1 8 in 1 422 9 2 -14.09 35,57,85,125,147,183,214,243 MWRGLALKAITKRFIFIYIP FLQKADEEMYGMKREKKSCC 75 ae001769_6 8 in 1 366 9 1 -9.56 37,134,194,243,274,304,326,358 MFRIAIVELKRILKKRSSLM LWTVVLFSISILSGKFVIRR 76 ae001792_8 8 out 11 270 2 3 2.64 36,70,94,119,146,192,218,268 MDDLKTRVITASVVAPFVVL GLLFVAPVSYIVFKILEGVV 77 ae001717_9 8 out 4 241 6 0 6.86 18,40,89,111,142,165,202,239 MIVLVFLGGILAGFLNVLAG ANWVRWIVFTAVIVVGIRYV 78 ae001696_13 8 out 3 319 1 3 1.62 38,62,85,114,172,219,260,302 MKILEVLWNIFSNPLFYKLT AGLIGRTRPPAADGVPYEKE 79 ae001812_13 8 out 2 245 4 0 4.93 23,54,77,123,145,174,204,245 MVLKGILYSTIAGMATSLGA LSTWWIMVGFLVMASLDVAL 80 ae001717_1 8 out 1 369 7 0 7.28 44,89,162,243,286,308,338,360 MLFLTNVLRSMGTMSFNLLI TLGLAVLSGGIVVLLFTKGG 81 ae001724_12 8 out 1 315 3 1 3.06 34,71,115,149,171,230,255,301 MDPAEFSRYFHLKSLLYMFL LPIFIGIAFLLIYRYPKEVT 82 ae001713_9 7 in 43 726 5 0 -5.30 120,144,181,203,359,412,709 MSDQKTMEDRAAKNEEIKKT AELAMAFSSITVTLNSMRVR 83 ae001778_18 7 in 17 329 9 0 -9.61 28,123,161,207,266,288,313 MRKYLTKKILIYILTFFFAV LVDIFYVIIDPRIRKSYSGE 84 ae001690_18 7 in 16 338 9 0 -9.99 33,132,173,218,277,299,324 MGSKSMFKYLLRRFIFLLVT NFIVDFLYALIDPRIRLGQE 85 ae001728_18 7 in 16 321 9 0 -9.39 28,118,158,204,262,284,309 MLKYIARRLIIMIPELIIIS VIGNLVADVLLAAVDPRVRF 86 ae001766_7 7 in 15 327 9 0 -9.10 28,123,161,209,269,291,316 MVAYILRRLITAFITLWIIS VIGTLISDILLAWVDPRIRF 87 ae001813_4 7 in 15 341 4 0 -4.75 51,152,192,225,282,304,329 MNSEPWDFPGLLLNMSNGVV MIMNLIVDVLYAILDPRIKL 88 ae001694_2 7 in 10 335 9 1 -9.87 30,131,172,218,276,298,323 MSFVRRYLLPRLITYFLVVF TTSILVIDLLYPLFDPRVRY 89 ae001698_8 7 in 10 282 3 4 -3.04 52,93,127,168,217,251,277 MDQRNKTLRDLPWEGERLSF PPGPVIVIIAFVSFLPMLKF 90 ae001791_10 7 in 8 256 5 2 -5.23 28,83,124,146,199,221,248 MKPGRFIKTIVILTMVFFYL FMIAGTILIGFVLRRFVRYI 91 ae001733_6 7 in 5 235 9 3 -13.53 26,80,108,134,164,189,217 MRKRAVYFILLFNAFIFVMM YIFLIRQIPEIDEAIRRFKA 92 ae001799_7 7 in 4 458 1 0 -1.88 52,80,109,140,176,205,249 MNRKRFLLITITVILSLMLV IEYPEEEKIQKVVKINDKNT 93 ae001823_12 7 in 4 271 6 3 -6.69 52,81,122,145,168,210,262 MRLPTVLIGRYIPVDSIVHR GVLVLVLFGRYFVDGVFQYG 94 ae001771_5 7 in 2 299 2 4 -2.30 37,70,110,163,211,255,287 MVFFLQNLFNGIMLGGLYAL LIIILLVKPSGLLGKKIVEK 95 ae001718_9 7 in 1 336 3 1 -3.95 42,159,208,242,276,300,326 MSEFLALFSAMWKESWRDKI MFLAGLMFVFYTASLVLRKE 96 ae001729_8 7 in 1 412 3 2 -3.51 35,208,259,303,336,358,391 MFGKLLKKEIKELLNLGAIV FNSDYVVLGWQREKRLKFFS 97 ae001764_9 7 in 1 263 1 3 -1.35 35,88,131,154,178,204,254 MNIFRWDMKRYMKSTIAWTV LVNIALLISSIVLFSKKDIL 98 ae001779_11 7 in 1 281 0 3 -0.27 25,80,109,145,169,222,270 MRGKWISFLLILPAVLYLVL TIVVSWFYITFLSAKHLEGA 99 ae001785_8 7 in 1 253 2 3 -2.29 40,64,111,150,177,203,234 MRKILHLVLKEMKIRLKYRF GVWLLKKAENEIRKKGEWES 100 ae001785_9 7 in 1 271 3 2 -3.64 46,85,117,139,163,221,252 MGIMVRSLYLAKASFLSAKR FGTISFKVLQTKGRKNGLQG 101 ae001755_12 7 out 18 678 4 0 4.87 21,46,73,120,208,248,301 MKNVDIIVSLMIVAIVLLMV VISYDEIPDDYTLQIEGVVK 102 ae001728_19 7 out 16 516 2 2 2.99 53,273,328,366,392,450,500 MAEEKTMIENGEIEFKERVL VLSFNFVGDALRDALDPRSL 103 ae001820_8 7 out 15 833 4 1 4.51 31,567,641,677,714,765,818 MMVRKKNRWLTHVLLTLLVV ILFLSLQKYIVGGLTKGSVK 104 ae001781_8 7 out 14 275 2 2 2.34 24,78,117,147,198,220,264 MIVALSGTGILALFLLVFFL LLVISLVLTGLSRYISGRQT 105 ae001777_3 7 out 13 823 6 1 6.41 29,558,633,667,703,754,808 MVQRRGNIFTHIFLIFIIAV ILFLSLQRYLVSGLTRGAVK 106 ae001822_9 7 out 12 290 0 1 0.27 36,91,121,143,175,223,280 MSLKRREARLGWGLVSIYLL LINFSIVIFIRKVIEKEVTV 107 ae001781_7 7 out 11 276 3 0 3.39 31,82,118,144,195,217,264 MRKDLIASYVFRAVSYVAFA VVALIYGTAFFLRRRKNGAH 108 ae001721_1 7 out 6 273 9 2 21.81 26,59,89,128,164,189,264 MHLGALLITFREALEASVII QFGYLVLALILITRAYKRKE 109 ae001704_6 7 out 4 263 8 4 8.65 27,62,84,119,147,224,246 MMGPVDIGLIQLLSAYIFVV VSVFLYLGYKAFFNRENQLI 110 ae001755_14 7 out 3 258 2 1 2.16 35,59,104,147,175,204,241 MILETIFSFLEEKFLAWMCI ADMAQKISALSWNAIQELLG 111 ae001754_11 7 out 2 237 8 4 8.98 57,85,110,151,186,210,233 MDLLLGIVQGLTEFLPISSS GKIWQFSYYCLFVAILSYLA 112 ae001701_10 7 out 1 264 2 3 2.75 31,75,97,124,161,190,253 MKVWFFFSGVLMGIANVVPG SLTLGFFLLYIEKKLSVTQK 113 ae001732_3 7 out 1 503 9 1 16.63 52,80,118,140,192,219,488 MNRRRWWRSSERRWRGLVSL VVSVFISRMRGERNEGIGIR 114 ae001735_6 7 out 1 236 9 0 11.42 32,54,78,104,145,192,214 MLVNWMFLGLEYLVGVLLVF WVVVKGVGWMLNSSEPYLQK 115 ae001771_3 7 out 1 418 9 2 10.31 48,78,102,131,200,235,296 MFHDVLFGSALLLVLMKDIN IFSESEKELKKTNINLQKNL 116 ae001787_3 7 out 1 285 6 0 6.96 34,59,94,148,179,216,268 MFHGGSEFSSGGEGHLKLLI GIVAFKRSFNQARLRGSLSW 117 ae001807_14 7 out 1 222 9 1 14.64 43,65,98,120,144,175,208 MCVEGLIGDFFRLIIKNWYF LFLFLSAWFTFRKRSYQKTS 118 ae001812_10 7 out 1 1074 4 0 4.26 45,85,130,309,363,402,427 MNSFSSKNPEGCSLKVLIKY RDFPNSGIGFDTEEGIGLNV