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Transmembrane helices for thema (Thermotoga maritima)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
119ae001692_106in19|ali|phd|phdHtm|36293-10.3844,177,212,240,296,347MDKTEELYLASEWKLMWWRF
120ae001766_66in19|ali|phd|phdHtm|36793-12.0148,181,215,245,299,351MKKREQMEEKFYYASQWQLI
121ae001776_86in19|ali|phd|phdHtm|29195-13.8236,98,133,158,215,267MKQIVRVFRDLFRDYRFTVA
122ae001726_216in17|ali|phd|phdHtm|31391-11.9636,131,174,196,244,297MNQEFKRIMKRFFRDPSAII
123ae001726_226in17|ali|phd|phdHtm|34593-12.6828,122,162,227,287,335MTAYIIRRLLLLPLILLGVT
124ae001813_56in17|ali|phd|phdHtm|28992-13.2344,109,151,173,222,272MLRKNKTESIGYWKAFWLRF
125ae001734_106in16|ali|phd|phdHtm|27774-7.1737,96,132,158,211,262MSSWKIVDAPDFVKEVRVKG
126ae001772_46in16|ali|phd|phdHtm|33594-11.0830,119,160,218,278,324MSLKNYVITRILLAAPMIFI
127ae001772_86in16|ali|phd|phdHtm|30191-14.1854,118,161,183,231,282MWYYYEKREARSKVVVSERI
128ae001776_96in16|ali|phd|phdHtm|33495-10.7930,131,169,217,282,323MNFIKGYLIPRLLQYFIVTF
129ae001710_26in15|ali|phd|phdHtm|28185-8.9630,103,137,164,216,268MMKKILTIVRYILIAICLIF
130ae001712_26in15|ali|phd|phdHtm|33494-13.0531,131,171,217,277,322MKFIKSYLIPRLIQYVYMVV
131ae001721_146in15|ali|phd|phdHtm|27165-6.2526,88,123,152,203,256MLTKTIKWIFIVFMLVVFML
132ae001748_96in15|ali|phd|phdHtm|30095-10.8239,97,130,183,230,285MPGRYYKSLRKKQLLLAFFF
133ae001692_116in14|ali|phd|phdHtm|32894-11.7528,124,164,210,272,317MLAYIAKRVLYAIPLLFVIS
134ae001721_156in13|ali|phd|phdHtm|28695-10.8334,89,123,175,221,276MIRSLVRSRFIFVLPGLVFL
135ae001748_106in13|ali|phd|phdHtm|27185-8.4229,91,126,153,204,257MPKIRKVLTYVVLVLFSLLS
136ae001710_16in12|ali|phd|phdHtm|29494-10.7430,89,120,174,221,277MRKRIVPWLMVLPVLALFLA
137ae001770_96in12|ali|phd|phdHtm|30294-11.3245,101,134,187,233,291MFPLTPYHFSGGIKLKRVLP
138ae001822_86in12|ali|phd|phdHtm|27395-9.1130,93,130,155,206,260MRKKMGEIILHGVMILLALI
139ae001712_36in10|ali|phd|phdHtm|28992-14.7837,99,121,150,214,266MKRILRLFFDMWEDLRFKYA
140ae001721_36in10|ali|phd|phdHtm|29484-8.8631,85,118,169,222,274MKKLKPWLLLSPLLIFVIIF
141ae001770_106in10|ali|phd|phdHtm|27695-10.0432,92,130,156,209,260MRRKRSITILYEIILVMVTF
142ae001810_26in10|ali|phd|phdHtm|24091-9.0919,109,151,173,203,235MWYLLTFAIGTIVGSFLNVV
143ae001721_46in8|ali|phd|phdHtm|28355-5.9440,99,136,162,216,268MMKVTFWQKNSEKIRNLIII
144ae001729_36in8|ali|phd|phdHtm|28443-4.3228,53,91,124,159,182MKKKLLFSIWLNAIITLSEV
145ae001791_96in8|ali|phd|phdHtm|26296-9.7222,76,111,152,205,254MKYVYFLWLLFLFILPISIV
146ae001726_46in6|ali|phd|phdHtm|25094-13.2830,75,100,129,188,231MKRRYRSTAKWLFFIALIFV
147ae001702_106in4|ali|phd|phdHtm|28362-6.5938,70,92,123,169,191MIEKIKEYVLSTLGTLITAV
148ae001797_156in4|ali|phd|phdHtm|42631-3.1629,55,96,133,167,213MIKNKNSERIFLIYSLSILA
149ae001708_76in3|ali|phd|phdHtm|19104-0.0432,54,89,116,152,188MKVFLLFFSAIFVNNFVLAR
150ae001779_106in3|ali|phd|phdHtm|26587-8.4627,83,123,154,201,253MMKKFFIIFLSVIISLWFLT
151ae001694_36in2|ali|phd|phdHtm|28793-14.3135,98,138,160,216,265MERMQVLKDLLRDTRFRFGF
152ae001747_176in2|ali|phd|phdHtm|21283-8.4526,48,89,124,163,192MEKSNEKLILLTGIFVSALT
153ae001705_66in1|ali|phd|phdHtm|24391-15.6327,74,119,141,180,227MRAVFGILLVLIAWYLLHFL
154ae001769_46in1|ali|phd|phdHtm|25064-6.8421,53,75,103,147,170MSVLYSIIALALYLAFMFSI
155ae001778_56in1|ali|phd|phdHtm|25463-6.7822,109,145,168,209,237MRRFFAILISAAFVYVMLSF
156ae001800_66in1|ali|phd|phdHtm|20844-4.2334,56,88,126,175,202MPMVKRISEISFLSVLIGLF
157ae001795_26out51|ali|phd|phdHtm|234030.5825,56,98,150,179,232MSVYLAEFLGTMLLIILGDG
158ae001805_86out37|ali|phd|phdHtm|283838.9079,137,188,221,243,272MDGLKITFSKKEKIFLAVFI
159ae001771_106out5|ali|phd|phdHtm|216858.6936,58,87,144,172,211MSFAVAEVSYWMALGYGLLA
160ae001796_76out4|ali|phd|phdHtm|196545.4321,73,97,133,156,178MGWWLFPILGYFIGSIPFSY
161ae001800_56out4|ali|phd|phdHtm|289242.2246,111,154,180,236,286MKYFVAVRPFSFVASAFPVT
162ae001797_96out3|ali|phd|phdHtm|445000.2423,239,266,333,373,411MVLRKVVAILLAILPIFLFA
163ae001707_56out1|ali|phd|phdHtm|224131.0222,62,113,156,178,218MFHYAVLLNALGVLIGASVG
164ae001715_126out1|ali|phd|phdHtm|200202.3820,62,84,132,161,196MISIFFGSFLVGLSGAVAPG
165ae001758_16out1|ali|phd|phdHtm|386313.40182,223,255,285,352,376MEFSFLFDDMIDGKRVVLFD
166ae001773_66out1|ali|phd|phdHtm|4469013.87299,324,346,377,410,439MKIKVEIDLQELIEKGDFKT
167ae001781_105in202|ali|phd|phdHtm|57780-8.0737,77,163,185,263MKTSSILVDFLKRNWHKYLL
168ae001785_155in131|ali|phd|phdHtm|58020-2.8740,78,162,184,276MNLRSIQKILRFYSLIRKRF
169ae001741_135in18|ali|phd|phdHtm|24930-3.3922,64,105,209,235MRKLLLILLIFLPLLYFSQE
170ae001753_135in7|ali|phd|phdHtm|30662-6.3034,59,97,132,184MERHEEIKKGAWIGILGNTV
171ae001752_105in5|ali|phd|phdHtm|29363-6.5633,156,195,252,281MRKEIDFMGKSKIFITISLI
172ae001801_85in3|ali|phd|phdHtm|21190-11.9052,89,125,167,189MGWSRRDHHLCAKRGDNILR
173ae001801_35in2|ali|phd|phdHtm|29624-2.7564,113,137,201,229MKAGGQAVIEGVLMIARKVS
174ae001740_115in1|ali|phd|phdHtm|20502-0.3428,74,115,139,190MVNMRIIVPTLGNILTGFLA
175ae001744_145in1|ali|phd|phdHtm|21790-12.8161,83,108,180,212MIFLFPFHLFLGHVVADHGF
176ae001746_75in1|ali|phd|phdHtm|24014-1.9823,88,132,189,232MKVRFLVMFFLLLGTFVLLV
177ae001780_115in1|ali|phd|phdHtm|19146-4.9739,63,93,117,168MIESFVKGFREIVQNTKLAV
178ae001810_95in1|ali|phd|phdHtm|59390-16.9622,44,68,113,135MSDYLLVVFLAAKIVLFYVP
179ae001734_45out31|ali|phd|phdHtm|216959.7842,78,103,167,205MPEWLSVIVDNLPLLLKGAL
180ae001778_175out16|ali|phd|phdHtm|282242.5334,99,148,213,264MTRKEFVHFFLKNKKVIFAI
181ae001690_175out8|ali|phd|phdHtm|280262.7233,97,147,211,264MFRTMIRPLFKNKKFIIGFS
182ae001737_95out8|ali|phd|phdHtm|408020.4136,74,98,245,401MYQLIVFDLVVLSALNLPFF
183ae001752_95out8|ali|phd|phdHtm|4659111.34319,348,370,414,443MRGDRVRLIVVLLVLAGALL
184ae001800_135out5|ali|phd|phdHtm|194131.4526,83,114,147,169MFVDYLTVFMADVVAGLGVL
185ae001797_35out2|ali|phd|phdHtm|183666.4128,62,94,131,162MSSIKKISFVGIFSALATLV
186ae001728_35out1|ali|phd|phdHtm|204010.5327,60,94,123,179MKRVNMNLAWMGVVFSAMSS
187ae001731_45out1|ali|phd|phdHtm|182434.2144,66,96,138,165MKRLKYLLLFFATFLFDNSG
188ae001747_245out1|ali|phd|phdHtm|169363.7534,68,96,130,157MRQLIKAGIFTALIVVGAWI
189ae001768_135out1|ali|phd|phdHtm|2229511.1234,87,125,161,207MFPLYDVLPSRKKPYVTIAL
190ae001799_105out1|ali|phd|phdHtm|230101.7224,126,155,177,220MFFLFDPTFIILIPGILLAF
191ae001808_175out1|ali|phd|phdHtm|168262.9142,79,107,129,155MNLSTAKTLAGVGMILKLFG
192ae001740_54in10|ali|phd|phdHtm|26273-7.5724,48,169,201MDLATLMGLVLVIAALFIGI
193ae001755_134in10|ali|phd|phdHtm|37493-9.7777,131,185,227MGGHGSENLSTQLERYSGTS
194ae001696_24in9|ali|phd|phdHtm|39991-10.50187,233,287,389MPFYKYVAVEGSGKKITGVI
195ae001708_64in6|ali|phd|phdHtm|20099-9.1553,85,114,183MSRLRELTKGIIKENPTYVQ
196ae001716_14in4|ali|phd|phdHtm|40493-9.4538,295,346,385MEILKEVLRSLLANKMRTFL
197ae001754_84in4|ali|phd|phdHtm|50131-3.8918,115,442,492MVIVYFILILTGVIMVHELG
198ae001764_34in3|ali|phd|phdHtm|17393-24.3024,103,125,162MKRSFLVLTLILMWIGLVFF
199ae001801_24in3|ali|phd|phdHtm|60591-14.5927,56,93,115MVRKALLFVIDVALTYFAGV
200ae001818_24in3|ali|phd|phdHtm|15696-10.1241,63,99,136MHVKKVTYGGLVSALVVLLL
201ae001769_164in2|ali|phd|phdHtm|20010-1.6020,68,162,190MKWVWITIFVVFCFAVLLNG
202ae001693_34in1|ali|phd|phdHtm|14818-1.1230,70,109,131MKKIFNYVLAYLFLAVTSVL
203ae001725_64in1|ali|phd|phdHtm|41791-12.3722,358,392,417MKKLLALFLVLGLLVTAAFA
204ae001752_74in1|ali|phd|phdHtm|16889-8.8761,88,118,151MRMRKLTYTAMWLAVGVALA
205ae001763_54in1|ali|phd|phdHtm|13998-15.2736,67,91,127MYRDKIAKIIGTVFSALTVL
206ae001799_134in1|ali|phd|phdHtm|13729-2.0336,72,97,126MFEEGERLRYLVQLFSLLLV
207ae001819_44in1|ali|phd|phdHtm|16696-10.1370,97,142,164MLKLAFIFLKIGFLSFGGGW
208ae001691_114out220|ali|phd|phdHtm|581020.8039,82,173,271MILSPEKFLLRYAKKYWYLF
209ae001710_104out219|ali|phd|phdHtm|577111.6133,73,160,258MKTLARYLKPYWIFAVLAPL
210ae001787_54out209|ali|phd|phdHtm|571020.3344,82,171,271MKFFSASNVRDDIKKFERKY
211ae001710_114out206|ali|phd|phdHtm|598020.2154,98,185,283MPEIRRRPHGPILEKPALKN
212ae001786_54out151|ali|phd|phdHtm|564111.4637,74,164,262MKTGKFRLLRKNHIALAVLT
213ae001751_74out19|ali|phd|phdHtm|455727.5831,86,116,153MEDPVSSVLTLGLESLLLVI
214ae001724_134out9|ali|phd|phdHtm|1869012.4518,72,94,131MAFVMVLTIVLDQLTKRIAS
215ae001823_54out7|ali|phd|phdHtm|178151.2340,98,140,163MGVSDMNLANFFSLLRAALV
216ae001713_34out4|ali|phd|phdHtm|163848.7356,92,120,149MMLWKALIFLGIYAVLHFGY
217ae001819_54out4|ali|phd|phdHtm|190757.5591,122,144,181MEICVEGKSSKIEVQEGSNL
218ae001744_164out2|ali|phd|phdHtm|142292.5047,69,109,134MMLNLINLDDSGKKYSFLVP
num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
219ae001692_44out1|ali|phd|phdHtm|364111.1220,172,238,291MRFFLVAIVLLGVSMFGFNI
220ae001753_54out1|ali|phd|phdHtm|1609515.2425,67,132,154MIWFLEGLSFSVVGFFVSVF
221ae001758_34out1|ali|phd|phdHtm|342303.2529,67,139,260MEGIQHLRYKLGTAALLVSL
222ae001783_84out1|ali|phd|phdHtm|203858.8522,74,136,173MLNFFLITIQFLSGAVMYSH

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