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Transmembrane helices for thema (Thermotoga maritima)
Jinfeng Liu & Burkhard Rost
CUBIC Columbia Univ, Dept Biochem & Mol Biophysics
| num | id | nhtm | top | nali | ali|phd|phdHtm | len1 | riTop | riMod | topD | htmCN | seqN |
| 248 | ae001711_1 | 2 | in | 29 | |ali|phd|phdHtm| | 367 | 2 | 0 | -2.01 | 206,327 | MIQKGLEGVKICESSICYLD |
| 249 | ae001759_8 | 2 | in | 18 | |ali|phd|phdHtm| | 251 | 9 | 4 | -11.16 | 194,240 | MFEDVLRSLASGEITIQEAE |
| 250 | ae001741_12 | 2 | in | 12 | |ali|phd|phdHtm| | 88 | 5 | 9 | -5.13 | 37,70 | MTIEVFLDIMKSGISLLLEI |
| 251 | ae001690_14 | 2 | in | 6 | |ali|phd|phdHtm| | 68 | 9 | 8 | -19.03 | 22,55 | MFTKAVLSIFSWALVLELIV |
| 252 | ae001706_12 | 2 | in | 6 | |ali|phd|phdHtm| | 532 | 9 | 1 | -12.89 | 46,463 | MNIVERLRDLWKKIVDLWNS |
| 253 | ae001795_1 | 2 | in | 5 | |ali|phd|phdHtm| | 566 | 9 | 0 | -9.16 | 25,207 | MRSIASKVLVIGVVVVLAFF |
| 254 | ae001719_11 | 2 | in | 4 | |ali|phd|phdHtm| | 405 | 0 | 3 | -0.44 | 36,179 | MLPVTSERKAFRKTQLIWTA |
| 255 | ae001753_3 | 2 | in | 4 | |ali|phd|phdHtm| | 140 | 9 | 9 | -14.91 | 27,56 | MEAWVFWLVLGVILMVAEIL |
| 256 | ae001707_10 | 2 | in | 3 | |ali|phd|phdHtm| | 339 | 4 | 1 | -4.16 | 123,267 | MIKVAAAGGGTGGHLYPLLA |
| 257 | ae001708_13 | 2 | in | 3 | |ali|phd|phdHtm| | 130 | 9 | 2 | -11.53 | 29,53 | MAVIRFRVPFWYKFIMILLW |
| 258 | ae001725_7 | 2 | in | 3 | |ali|phd|phdHtm| | 400 | 9 | 0 | -28.86 | 23,398 | MKRVLLTVAMLSVFFSAMFA |
| 259 | ae001756_2 | 2 | in | 3 | |ali|phd|phdHtm| | 661 | 4 | 1 | -4.12 | 26,172 | MTLRAKVFLVILVVLAGLLV |
| 260 | ae001778_1 | 2 | in | 3 | |ali|phd|phdHtm| | 155 | 1 | 9 | -1.56 | 33,68 | MSVFLTSLILWLVITRFSYS |
| 261 | ae001778_4 | 2 | in | 3 | |ali|phd|phdHtm| | 70 | 9 | 7 | -15.56 | 25,54 | MMLIAAFFAVEARKILDSVI |
| 262 | ae001689_7 | 2 | in | 1 | |ali|phd|phdHtm| | 438 | 8 | 2 | -8.00 | 334,362 | MEFLIYSLPEEVLREEMLGN |
| 263 | ae001690_1 | 2 | in | 1 | |ali|phd|phdHtm| | 253 | 0 | 0 | -0.10 | 104,164 | MFENEILFDNGQHKFMFLGW |
| 264 | ae001690_11 | 2 | in | 1 | |ali|phd|phdHtm| | 656 | 9 | 1 | -13.33 | 23,297 | MNIRFRIIFIMVVILVSFVL |
| 265 | ae001694_10 | 2 | in | 1 | |ali|phd|phdHtm| | 329 | 9 | 1 | -12.29 | 55,77 | MIRKPGNPPAVKGNHLPRHQ |
| 266 | ae001697_8 | 2 | in | 1 | |ali|phd|phdHtm| | 335 | 3 | 1 | -3.07 | 38,109 | MWNKTSLQGGVIMRKLLVFL |
| 267 | ae001701_9 | 2 | in | 1 | |ali|phd|phdHtm| | 278 | 6 | 4 | -6.00 | 20,147 | MVVVKGLILIFILLSLVSVA |
| 268 | ae001712_8 | 2 | in | 1 | |ali|phd|phdHtm| | 473 | 9 | 0 | -20.00 | 92,114 | MKGKYRVGLISFSDGREYVH |
| 269 | ae001720_14 | 2 | in | 1 | |ali|phd|phdHtm| | 286 | 5 | 1 | -5.36 | 213,255 | MITFIGHVSKDVNVVDGKRE |
| 270 | ae001731_3 | 2 | in | 1 | |ali|phd|phdHtm| | 351 | 9 | 3 | -10.08 | 311,345 | MEEKRLSAKKGLPPGTLVYT |
| 271 | ae001738_14 | 2 | in | 1 | |ali|phd|phdHtm| | 256 | 1 | 2 | -1.68 | 24,124 | MSRSLTTILVCLMFLSAFPQ |
| 272 | ae001738_8 | 2 | in | 1 | |ali|phd|phdHtm| | 640 | 7 | 1 | -7.28 | 40,463 | MEERELTLSDILLMFKRRSK |
| 273 | ae001740_10 | 2 | in | 1 | |ali|phd|phdHtm| | 321 | 3 | 2 | -3.00 | 110,258 | MRWFSLATAFLWGYYGFDNF |
| 274 | ae001747_7 | 2 | in | 1 | |ali|phd|phdHtm| | 334 | 5 | 3 | -5.07 | 72,312 | MVEELLGKALARKRSLRKDE |
| 275 | ae001758_14 | 2 | in | 1 | |ali|phd|phdHtm| | 217 | 3 | 1 | -3.88 | 28,195 | MKSKLTKRKVISMIVVFFIL |
| 276 | ae001766_3 | 2 | in | 1 | |ali|phd|phdHtm| | 387 | 4 | 1 | -4.00 | 173,285 | MRSMTDVRRYWISLLRKICE |
| 277 | ae001770_14 | 2 | in | 1 | |ali|phd|phdHtm| | 612 | 7 | 1 | -7.15 | 26,154 | MRNGSILVTTVIILVIVSVL |
| 278 | ae001770_5 | 2 | in | 1 | |ali|phd|phdHtm| | 387 | 9 | 1 | -17.24 | 22,81 | MRKLGFVLFVLITAVMTAQE |
| 279 | ae001773_1 | 2 | in | 1 | |ali|phd|phdHtm| | 129 | 9 | 9 | -10.12 | 52,108 | MFMKQLRRSRKNRIIAGVCG |
| 280 | ae001789_4 | 2 | in | 1 | |ali|phd|phdHtm| | 352 | 9 | 2 | -11.00 | 21,296 | MRVLRIIFILLLLIPSLLTM |
| 281 | ae001793_8 | 2 | in | 1 | |ali|phd|phdHtm| | 398 | 1 | 0 | -1.39 | 29,62 | MKPRKKSWFVEVLISYGIVF |
| 282 | ae001794_9 | 2 | in | 1 | |ali|phd|phdHtm| | 379 | 9 | 1 | -12.68 | 64,87 | MLTCDVFFASKNKKGEEVCG |
| 283 | ae001808_18 | 2 | in | 1 | |ali|phd|phdHtm| | 277 | 7 | 2 | -7.12 | 25,196 | MYLKRYKWIFLVVAMLIFFG |
| 284 | ae001810_5 | 2 | in | 1 | |ali|phd|phdHtm| | 558 | 3 | 0 | -3.89 | 38,60 | MFIKYRRRLLKVTEKMEKLI |
| 285 | ae001805_7 | 2 | out | 49 | |ali|phd|phdHtm| | 85 | 9 | 9 | 9.62 | 39,83 | MENLGDLAQGLALLGKYLGA |
| 286 | ae001769_14 | 2 | out | 10 | |ali|phd|phdHtm| | 78 | 1 | 9 | 1.05 | 28,68 | MIYVGVVLMFLGTLLSLLKK |
| 287 | ae001746_16 | 2 | out | 8 | |ali|phd|phdHtm| | 73 | 2 | 9 | 2.58 | 32,63 | MFQGIGKFLILMGLILVAFG |
| 288 | ae001728_21 | 2 | out | 3 | |ali|phd|phdHtm| | 205 | 0 | 6 | 0.58 | 29,177 | MKKDSLVTFFASLIVIAILL |
| 289 | ae001741_14 | 2 | out | 3 | |ali|phd|phdHtm| | 97 | 0 | 9 | 0.01 | 22,68 | MSGILQFLLAFGIVLFFLLL |
| 290 | ae001716_7 | 2 | out | 2 | |ali|phd|phdHtm| | 68 | 9 | 9 | 22.14 | 26,66 | MRFVSDFLFFAGFGLLFIAI |
| 291 | ae001755_20 | 2 | out | 2 | |ali|phd|phdHtm| | 284 | 9 | 2 | 19.28 | 26,139 | MVDIGTLIFQIFWMIFIFSL |
| 292 | ae001812_7 | 2 | out | 2 | |ali|phd|phdHtm| | 98 | 7 | 9 | 7.53 | 34,89 | MFVIANLLRSIAVVLRTFIY |
| 293 | ae001720_12 | 2 | out | 1 | |ali|phd|phdHtm| | 311 | 4 | 0 | 4.50 | 107,143 | MERPTGVYFQTMTMKQIRER |
| 294 | ae001737_1 | 2 | out | 1 | |ali|phd|phdHtm| | 350 | 7 | 3 | 7.10 | 55,98 | MLMNTTKIKERIGHLLIMVM |
| 295 | ae001737_2 | 2 | out | 1 | |ali|phd|phdHtm| | 383 | 1 | 0 | 1.72 | 199,327 | MFRLEELNYPDTLKDFIKQI |
| 296 | ae001757_5 | 2 | out | 1 | |ali|phd|phdHtm| | 135 | 1 | 2 | 1.12 | 20,101 | MLGIVLTAVVIFIVFILSLI |
| 297 | ae001773_8 | 2 | out | 1 | |ali|phd|phdHtm| | 490 | 9 | 0 | 16.00 | 21,323 | MQVFFYVVSFGFLVFALYLF |
| 298 | ae001774_2 | 2 | out | 1 | |ali|phd|phdHtm| | 618 | 9 | 1 | 16.00 | 20,265 | MIGIRGIVLLFLILSISIFS |
| 299 | ae001778_3 | 2 | out | 1 | |ali|phd|phdHtm| | 107 | 9 | 5 | 9.42 | 25,77 | MNEVIGEVLIAIGAFFYFLG |
| 300 | ae001785_12 | 2 | out | 1 | |ali|phd|phdHtm| | 127 | 9 | 9 | 10.46 | 46,69 | MRLLRHFWISYKGVSLWLNW |
| 301 | ae001809_12 | 2 | out | 1 | |ali|phd|phdHtm| | 247 | 1 | 4 | 1.43 | 29,103 | MRKIRNLLLTLYFYFIATVY |
| 302 | ae001817_5 | 2 | out | 1 | |ali|phd|phdHtm| | 442 | 5 | 1 | 5.13 | 67,184 | MASSSEGVSVLEIECKVVTP |
| 303 | ae001820_9 | 2 | out | 1 | |ali|phd|phdHtm| | 54 | 3 | 9 | 3.85 | 19,41 | MFLAVFNAGMVWAGIFLLQN |
| 304 | ae001823_10 | 2 | out | 1 | |ali|phd|phdHtm| | 457 | 4 | 2 | 4.76 | 56,85 | MRSRASPSALFLSTSIRTIS |
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