--- -------------------------------------------------------------------------------- --- --- All proteins with at least 10 transmembrane helices in Synechocystis PCC6803 --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 1 d1011460 15 in 59 634 1 0 -1.35 28,60,106,143,165,197,235,274,302,352,396,431,479,516,616 MSDFLLQSSWFIPFYGLIGS LSGQWMAIRQFWSSWLSLIL 2 d1010732 15 in 1 535 6 0 -6.77 42,68,113,147,178,200,228,257,279,322,373,410,467,489,523 MSATAIAPRWFVKQDIDGFF SYFLLALLLIYVQWTNPKGQ 3 d1017985 15 out 3 487 2 0 2.01 31,54,94,128,150,178,212,240,269,311,361,390,429,451,487 MTLFAVSAEFNAAPWATVVI VDHLLGMMSISLTILFAWIL 4 d1019528 14 in 1 770 7 0 -7.85 41,259,310,357,393,440,474,512,542,565,621,654,690,745 MANSTFDLPIATPPRTKSFG IFQQPTQPQPLDEVQVETPA 5 d1011181 14 out 71 681 1 0 1.89 58,108,144,166,201,242,278,309,360,412,447,530,579,680 MELLYQLAWLIPVLPLFGAT QFYALIVFGAVLGFVIVFSL 6 d1018168 14 out 11 615 5 0 5.09 30,57,106,152,199,234,274,299,351,396,431,474,507,609 MLESLSRIIWLVPCYALLGA IVLGLTLIGAFLSYSLLGQA 7 d1017987 14 out 5 495 2 1 2.12 28,56,94,132,154,183,209,250,273,315,357,395,433,495 MNFPTAIAPNNLLIAIVALL LDHLIGTMAIMLMLLFSSVL 8 d1018219 14 out 1 844 1 0 1.88 42,77,114,159,233,255,277,307,342,379,487,523,547,829 MWRYRSPEMPLTESFLDLML LIITAIALKFYPRKPEQTIF 9 d1019184 14 out 1 608 5 0 5.98 24,59,90,134,196,220,242,276,310,345,444,467,491,525 MLVPLLGLAIGFLLLTFSLL AEFNLEDERMKDKCEGLKIL 10 d1017571 13 in 70 559 1 0 -1.30 27,55,104,142,186,228,260,293,320,342,388,434,507 MLEHFPWLTTMIALPLVAAL AEALTAPHIPTTDFATVKVQ 11 d1019051 13 in 7 445 5 1 -5.38 36,58,80,126,172,201,254,277,307,352,381,403,436 MVDYDWLGPMMFVGALVFLG VLLLIIIFPALINWLPSLSV 12 d1018749 13 in 3 444 4 0 -4.21 25,53,87,144,166,200,249,275,303,325,365,396,420 MTISRTICLGFIAAIAGGTL AIVGDPKPSLIKYPEENLLV 13 d1019484 13 in 3 449 3 9 -3.56 22,44,75,116,152,196,252,274,300,337,359,401,441 MVANLPALFSLGVFVGVILL MAVQLVVAALFVAWLMFTQQ 14 d1011266 13 in 2 451 5 0 -5.38 35,70,111,144,170,197,238,271,307,353,378,403,434 MINGKPQPLLTRVGTWTVGG AARLANQVSSAIRTIGARNH 15 d1017454 13 out 42 521 0 0 0.82 35,64,97,134,156,187,232,268,298,353,395,432,492 MDFSSNVAAQLNAGTILPEG LQTALQQTGETPAIAISHDL 16 d1018990 13 out 11 544 2 0 2.89 40,62,104,137,181,246,279,340,374,399,424,476,518 MSQSLSAEKLHFTTKLAYGA TRAVHTDIRQQLQARQQNNH 17 d1010970 13 out 1 533 3 0 3.14 33,64,115,157,182,276,301,347,382,419,448,479,511 MSPSGKSSRSLANIAGIVAI LAKVPEVDLLGDRLWKKFKR 18 d1019079 13 out 1 512 7 1 7.43 22,58,99,142,171,194,247,291,339,390,423,445,473 MGMIDWAIVLVYSAIVIAIG VTDAPGTNVVARPGADDQDL 19 d1010768 12 in 58 468 8 2 -8.83 35,75,113,135,162,205,289,324,353,392,431,453 MNPSSSPSQSTANVKFVLLI ISIFFIWFFVKETKGKTLEQ 20 d1018022 12 in 53 551 6 1 -6.31 50,92,131,176,214,267,299,333,365,404,439,482 MTIAAENLTANHPRRKWTDY DTELMDDEETVQTLIADAAG 21 d1018704 12 in 53 544 5 1 -5.95 48,90,128,180,221,271,304,337,370,408,444,486 MTNQPTASVPFQRPWHDYLK TITVEPYGYDRPVDLTTEVT 22 d1011282 12 in 18 507 9 0 -10.94 63,108,144,201,227,265,305,333,361,384,422,458 MSNSILSKLNVGERSPVNRT TGFVKETDSFGSAVSGATVP 23 d1018802 12 in 13 1061 9 0 -9.08 29,364,389,411,462,492,557,892,914,941,990,1025 MFVDFFIKRPVFSSVCAIII NPEPSPEIESHTPAPASQRN 24 d1010740 12 in 11 1083 9 0 -9.72 32,371,403,425,469,498,564,902,924,963,1010,1046 MLLSISNVFIKNPVLTTVCT GDSNPPPPSGEDNGEPVNNP 25 d1010680 12 in 7 557 8 2 -8.31 38,81,118,166,218,268,320,361,398,438,494,546 MFNFLTVLPSPPKVLLNFWV AGMLPVIFLSVQIARSRPSE 26 d1011097 12 in 3 461 9 1 -11.34 37,74,117,154,185,214,270,299,341,379,416,442 MTDISMRFGMQAEAREFLKL AYLWRFQKVMVRKKSLPVAR 27 d1018036 12 in 3 402 1 1 -1.29 28,57,87,119,141,180,235,262,299,328,362,393 METIQFNIRQTIIVAILVLY GAFFIDIANAFVIQQFLNFL 28 d1011383 12 in 2 452 9 1 -9.05 42,70,118,145,181,219,257,300,353,384,418,442 MTVLTNSSSVPQLNRCLGLI IFFVLIVLGIGIIARQGADR 29 d1018200 12 in 2 472 6 1 -6.85 51,85,131,176,198,230,284,308,363,399,428,450 MNFDRIFAWPLTSLEVFMNL GWQLLTRFSPQTLALESKQP 30 d1018617 12 in 2 484 7 1 -7.33 41,67,109,146,185,240,291,332,373,395,421,459 MTVSESMAGSPLPKLPLVTM REFQDNAKTAIATVMAGDLD 31 d1019295 12 in 2 1075 9 0 -9.66 37,377,399,421,483,507,572,908,935,957,1008,1044 MSSPNSVFSLSGLAIRRHIA EKVKTDLESRLTEEDVPTKI 32 d1017329 12 in 1 427 6 1 -6.18 33,58,90,119,162,185,240,275,308,332,376,417 MKTFVTLCLGQALSSIGSGM CGVLAFLLGLWGLLIYQRGD 33 d1017572 12 in 1 391 2 0 -2.74 32,62,108,131,160,189,234,267,303,325,347,377 MGQYSAVLWRRVWGIALVQG TLLCARYWQGFRVPNKKGAG 34 d1018569 12 in 1 418 9 0 -11.01 37,72,108,130,155,184,240,264,296,332,371,396 MSSFQTLRQLSPSTQKTFAL TIGRSLRFCIGRSRDLYATP 35 d1018696 12 in 1 534 8 1 -8.09 40,83,115,162,207,252,301,345,379,412,459,521 MRSPTSFGGYWEKLGLVVSA LSIVLLMGSSLLSRGKKYDQ 36 d1019326 12 in 1 465 5 1 -5.11 45,79,112,159,205,238,296,325,354,377,417,442 MESKLLSANQGFGPVLRNSR YINENSPSVAPRKEKGSSSS 37 d1011459 12 out 76 507 1 0 1.62 48,96,137,181,222,254,286,314,336,386,422,470 MLSALIWGPIFGAILIAIIP DLVSVPAPPRIEIEVKELGE 38 d1010688 12 out 72 525 2 0 2.19 51,103,141,185,227,260,292,319,341,386,433,482 MNTFPWLTTIILLPIVAALF VQQANLSPLEVTALRPPTIG 39 d1018167 12 out 67 502 1 0 1.70 49,97,137,181,222,255,287,313,336,384,422,470 MLSLLLILPVIGALIIGFFP IAQLPHETSAIEQLAQGVTL 40 d1017724 12 out 5 410 8 2 8.05 26,50,88,121,154,193,221,266,309,339,375,398 MDTNTLLLILANIIVIIGLA AIITTIITSPLVVKIYPAPA 41 d1010983 12 out 4 461 6 2 6.42 45,71,133,164,188,230,264,307,346,379,411,439 MFMNPLLPPLWPMIATAVET RAVFEGAKKEEAPEKPVPTP 42 d1018258 12 out 1 483 7 0 7.44 37,113,135,176,198,226,248,304,365,390,418,448 MMGKFFHFINDEKNLKYCFL ELYQNQFEVIPFFVSHLLEK 43 d1019311 11 in 11 899 3 0 -3.31 46,86,128,187,219,260,296,337,359,394,416 MAWFPFWQRWQQWLRSRHYG VDSPNEEAIVPPLAPDFGLD 44 d1019390 11 in 4 399 1 0 -1.55 50,95,119,147,186,226,249,299,321,352,385 MSNEAPMETIPVDYGTLTPP SHWLVVFGALVGLVGQSWSM 45 d1018009 11 in 2 464 4 0 -4.67 44,104,127,164,210,244,286,330,377,407,438 MAMSKPNLRKLMENLGQKLQ RSLPDVIVSTVSTTNQLPAE 46 d1018881 11 in 2 372 3 1 -3.13 25,47,82,110,149,181,242,274,314,339,368 MSTKSKIFLVLLVFCPLSFA ILLLATYAIVALAFFFHPTL 47 d1011353 11 in 1 445 2 0 -2.02 45,69,113,166,190,249,278,315,337,372,395 MGKLPPIFHCLRNRLFAQLY ATTVLNFSHNHLHFHFYKAS 48 d1017362 11 in 1 585 3 1 -3.14 50,124,179,208,273,320,386,450,472,513,549 MINFFSTHIDRLGDWYPQLY RYVQRLGRSESQQYLAPVQP 49 d1018392 11 in 1 356 1 1 -1.93 23,66,96,135,157,196,236,258,292,321,351 MNSFLIIIFRLYLPISVAIL GLSSLMLFFTLPFWLWGFTT 50 d1017685 11 out 17 442 9 1 9.69 62,98,150,176,212,252,287,317,339,378,406 MKPKNFPLARYVLGAMLAFL VGLDIVEHGQTEKGVEIAFE 51 d1019544 11 out 11 909 1 1 1.62 56,305,343,403,431,492,763,785,809,858,893 MRINSSSKNRTQKKLGIPSM VPVLYSLLDDVWGQKPRPEK 52 d1017700 11 out 5 358 9 0 11.21 25,69,101,132,160,187,211,244,271,311,340 MLGGQYYLIAFILAVIVVWF VLLIYLGWQVWRNSRNVGEQ 53 d1011029 11 out 3 698 0 0 0.27 30,52,123,145,178,201,241,287,315,356,387 MDGLFAPIPSNPLIDFTILL VTDKILREITSSFVLFGDPY 54 d1017695 11 out 2 433 7 2 7.07 86,117,161,187,211,260,291,330,362,388,417 MVCSIVTAIFKPKKPSCLPP IALGLSLIPDLVRGKKNDTG 55 d1011013 11 out 1 494 5 1 5.16 49,92,137,189,212,262,302,329,368,391,432 MLVAMSMTPIAILFSTPLKR GSLSDQNFLPEFFPEKSSSR 56 d1011278 11 out 1 487 8 2 8.42 23,62,100,150,201,273,307,347,373,443,466 MLSLINVLFAFITIAILILA WNYKVIKREMIAEANSPNPI 57 d1011429 11 out 1 861 0 0 0.47 69,99,127,166,220,268,292,391,431,458,493 MAADSSSPPVSSPSSTSPSS PELDNELQPLRTELWQAIAK 58 d1018658 11 out 1 527 2 0 2.21 35,59,81,114,139,188,212,259,296,327,396 MDTAVNESLSISYNLEQFLI LEENIMPLLVTLEGENVAEP 59 d1018758 11 out 1 474 5 1 5.41 73,117,140,163,219,244,267,306,393,427,453 MVSPISIWRSLMFGGFSPQE SAQARLEASKEENEDKPLLA 60 d1018064 10 in 32 442 9 2 -12.47 45,96,143,170,201,236,289,336,396,420 MVVSRDKAPSAQETFLQMAQ TAKQIQTYVISQRYEGMIKQ 61 d1019002 10 in 16 393 9 0 -9.79 47,84,111,145,175,205,227,305,341,369 MITAANLLRIIFPFYDPEVL VARESNEAEVIPLGTKTAPA 62 d1011351 10 in 10 1054 1 0 -1.51 35,373,402,466,498,554,890,933,986,1020 MLNTLLNQILKTSIAQRWFI NGDHIAPFVRNDRVSTQKSH 63 d1017709 10 in 3 612 2 0 -2.93 33,55,79,128,164,204,444,480,526,603 MAFLQTWLADYQIPLTLAVI VILTLATPLLVMLIYGVQPT 64 d1018527 10 in 3 451 1 2 -1.30 49,89,194,227,263,300,340,364,402,427 MAADFETSNRRWLDKLPRNL LGGKPIYTVLLERTLAKQNR 65 d1019138 10 in 3 383 9 3 -11.95 40,73,111,160,187,221,261,291,321,350 MVNRINPKAIKAGGTLNLFE PRDPEKATLLDPRCINQEIR 66 d1017407 10 in 1 387 1 0 -1.19 45,69,91,125,163,198,287,310,346,368 MWAALTLWFLLTTITAHDRG VSQRYGTKLAQGDPAKLQVP 67 d1017659 10 in 1 443 1 1 -1.51 31,80,111,144,166,220,261,286,374,430 MPTIRINKLTDPVVFLHILF VIPILLGLIFYDNLDLKNIK 68 d1017768 10 in 1 477 1 0 -1.02 31,79,123,166,206,271,358,394,422,461 MLNQFPKLRLTPFTTGIVAI FLGLPLTPRGFALRMLFPSW 69 d1019270 10 in 1 330 9 2 -14.04 35,57,91,121,147,193,220,258,281,307 MQIESKTNTNIRSGLTLIAP EQLKIQLRDIWSLVRKPVIN 70 d1018171 10 out 22 731 4 0 4.55 67,154,292,350,391,435,532,590,661,723 MATKFPKFSQDLAQDPTTRR TVGYVLTYAAFLIASTAGKF 71 d1018170 10 out 21 751 5 0 5.30 93,177,312,370,410,455,550,608,686,747 MTISPPEREAKAKVSVDNNP YLLGGIVTTWAFFLARSLSI 72 d1011515 10 out 19 541 6 0 6.54 26,60,106,133,182,221,251,300,339,375 MTSIDTLWLLLCAGLVFFMQ QLVLQQQKQHHGNGESVDLS 73 d1019223 10 out 13 540 1 0 1.14 53,96,128,155,194,224,273,323,375,401 MIKLPVLLADINIQSLPTEP DDISDEYLQVLNEKLLALQD 74 d1010863 10 out 4 326 2 0 2.35 37,63,88,112,156,184,224,254,295,319 MSPRQLNFLSAFSLSVAIAV VWYRLIFGVVILTALGMGFG 75 d1018661 10 out 3 558 9 1 14.04 23,86,155,191,271,300,395,434,502,548 MLQGFVQIALILAILVATAP GALTFLPILVLGPVAEAFNL 76 d1011113 10 out 2 539 3 0 3.13 34,123,145,175,204,250,300,332,355,385 MNKLPKITNTNNEFFVSILA KEYQMKRFDISLAPSTLYCK 77 d1018247 10 out 2 498 1 0 1.14 43,66,109,136,178,200,240,287,325,382 MINWTILKREWFRNTKEDLL TLWQKLIKEPELKLINSSAE 78 d1011264 10 out 1 418 5 1 5.20 51,86,108,138,203,228,289,342,376,402 MSEPKPSQPNFSHLEEADYT SAIAAIPLFWNEKPSPINVS 79 d1017859 10 out 1 709 9 0 11.42 50,78,321,357,379,409,439,462,504,527 MRFHPLALICLSFILGLLGT VTGQGAIQWNPRESFNSSVN 80 d1018492 10 out 1 490 4 0 4.61 30,82,107,132,195,232,294,343,365,389 MKLTWLNSSRRLISVIIYLT IASKLNQVTQYSAYTLFSQT