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Transmembrane helices for syny3 (Synechocystis PCC6803)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
1d101146015in59|ali|phd|phdHtm|63410-1.3528,60,106,143,165,197,235,274,302,352, 396,431,479,516,616 MSDFLLQSSWFIPFYGLIGS
2d101073215in1|ali|phd|phdHtm|53560-6.7742,68,113,147,178,200,228,257,279,322, 373,410,467,489,523 MSATAIAPRWFVKQDIDGFF
3d101798515out3|ali|phd|phdHtm|487202.0131,54,94,128,150,178,212,240,269,311, 361,390,429,451,487 MTLFAVSAEFNAAPWATVVI
4d101952814in1|ali|phd|phdHtm|77070-7.8541,259,310,357,393,440,474,512,542,565, 621,654,690,745 MANSTFDLPIATPPRTKSFG
5d101118114out71|ali|phd|phdHtm|681101.8958,108,144,166,201,242,278,309,360,412, 447,530,579,680 MELLYQLAWLIPVLPLFGAT
6d101816814out11|ali|phd|phdHtm|615505.0930,57,106,152,199,234,274,299,351,396, 431,474,507,609 MLESLSRIIWLVPCYALLGA
7d101798714out5|ali|phd|phdHtm|495212.1228,56,94,132,154,183,209,250,273,315, 357,395,433,495 MNFPTAIAPNNLLIAIVALL
8d101821914out1|ali|phd|phdHtm|844101.8842,77,114,159,233,255,277,307,342,379, 487,523,547,829 MWRYRSPEMPLTESFLDLML
9d101918414out1|ali|phd|phdHtm|608505.9824,59,90,134,196,220,242,276,310,345, 444,467,491,525 MLVPLLGLAIGFLLLTFSLL
10d101757113in70|ali|phd|phdHtm|55910-1.3027,55,104,142,186,228,260,293,320,342, 388,434,507 MLEHFPWLTTMIALPLVAAL
11d101905113in7|ali|phd|phdHtm|44551-5.3836,58,80,126,172,201,254,277,307,352, 381,403,436 MVDYDWLGPMMFVGALVFLG
12d101874913in3|ali|phd|phdHtm|44440-4.2125,53,87,144,166,200,249,275,303,325, 365,396,420 MTISRTICLGFIAAIAGGTL
13d101948413in3|ali|phd|phdHtm|44939-3.5622,44,75,116,152,196,252,274,300,337, 359,401,441 MVANLPALFSLGVFVGVILL
14d101126613in2|ali|phd|phdHtm|45150-5.3835,70,111,144,170,197,238,271,307,353, 378,403,434 MINGKPQPLLTRVGTWTVGG
15d101745413out42|ali|phd|phdHtm|521000.8235,64,97,134,156,187,232,268,298,353, 395,432,492 MDFSSNVAAQLNAGTILPEG
16d101899013out11|ali|phd|phdHtm|544202.8940,62,104,137,181,246,279,340,374,399, 424,476,518 MSQSLSAEKLHFTTKLAYGA
17d101097013out1|ali|phd|phdHtm|533303.1433,64,115,157,182,276,301,347,382,419, 448,479,511 MSPSGKSSRSLANIAGIVAI
18d101907913out1|ali|phd|phdHtm|512717.4322,58,99,142,171,194,247,291,339,390, 423,445,473 MGMIDWAIVLVYSAIVIAIG
19d101076812in58|ali|phd|phdHtm|46882-8.8335,75,113,135,162,205,289,324,353,392, 431,453 MNPSSSPSQSTANVKFVLLI
20d101802212in53|ali|phd|phdHtm|55161-6.3150,92,131,176,214,267,299,333,365,404, 439,482 MTIAAENLTANHPRRKWTDY
21d101870412in53|ali|phd|phdHtm|54451-5.9548,90,128,180,221,271,304,337,370,408, 444,486 MTNQPTASVPFQRPWHDYLK
22d101128212in18|ali|phd|phdHtm|50790-10.9463,108,144,201,227,265,305,333,361,384, 422,458 MSNSILSKLNVGERSPVNRT
23d101880212in13|ali|phd|phdHtm|106190-9.0829,364,389,411,462,492,557,892,914,941, 990,1025 MFVDFFIKRPVFSSVCAIII
24d101074012in11|ali|phd|phdHtm|108390-9.7232,371,403,425,469,498,564,902,924,963, 1010,1046 MLLSISNVFIKNPVLTTVCT
25d101068012in7|ali|phd|phdHtm|55782-8.3138,81,118,166,218,268,320,361,398,438, 494,546 MFNFLTVLPSPPKVLLNFWV
26d101109712in3|ali|phd|phdHtm|46191-11.3437,74,117,154,185,214,270,299,341,379, 416,442 MTDISMRFGMQAEAREFLKL
27d101803612in3|ali|phd|phdHtm|40211-1.2928,57,87,119,141,180,235,262,299,328, 362,393 METIQFNIRQTIIVAILVLY
28d101138312in2|ali|phd|phdHtm|45291-9.0542,70,118,145,181,219,257,300,353,384, 418,442 MTVLTNSSSVPQLNRCLGLI
29d101820012in2|ali|phd|phdHtm|47261-6.8551,85,131,176,198,230,284,308,363,399, 428,450 MNFDRIFAWPLTSLEVFMNL
30d101861712in2|ali|phd|phdHtm|48471-7.3341,67,109,146,185,240,291,332,373,395, 421,459 MTVSESMAGSPLPKLPLVTM
31d101929512in2|ali|phd|phdHtm|107590-9.6637,377,399,421,483,507,572,908,935,957, 1008,1044 MSSPNSVFSLSGLAIRRHIA
32d101732912in1|ali|phd|phdHtm|42761-6.1833,58,90,119,162,185,240,275,308,332, 376,417 MKTFVTLCLGQALSSIGSGM
33d101757212in1|ali|phd|phdHtm|39120-2.7432,62,108,131,160,189,234,267,303,325, 347,377 MGQYSAVLWRRVWGIALVQG
34d101856912in1|ali|phd|phdHtm|41890-11.0137,72,108,130,155,184,240,264,296,332, 371,396 MSSFQTLRQLSPSTQKTFAL
35d101869612in1|ali|phd|phdHtm|53481-8.0940,83,115,162,207,252,301,345,379,412, 459,521 MRSPTSFGGYWEKLGLVVSA
36d101932612in1|ali|phd|phdHtm|46551-5.1145,79,112,159,205,238,296,325,354,377, 417,442 MESKLLSANQGFGPVLRNSR
37d101145912out76|ali|phd|phdHtm|507101.6248,96,137,181,222,254,286,314,336,386, 422,470 MLSALIWGPIFGAILIAIIP
38d101068812out72|ali|phd|phdHtm|525202.1951,103,141,185,227,260,292,319,341,386, 433,482 MNTFPWLTTIILLPIVAALF
39d101816712out67|ali|phd|phdHtm|502101.7049,97,137,181,222,255,287,313,336,384, 422,470 MLSLLLILPVIGALIIGFFP
40d101772412out5|ali|phd|phdHtm|410828.0526,50,88,121,154,193,221,266,309,339, 375,398 MDTNTLLLILANIIVIIGLA
41d101098312out4|ali|phd|phdHtm|461626.4245,71,133,164,188,230,264,307,346,379, 411,439 MFMNPLLPPLWPMIATAVET
42d101825812out1|ali|phd|phdHtm|483707.4437,113,135,176,198,226,248,304,365,390, 418,448 MMGKFFHFINDEKNLKYCFL
43d101931111in11|ali|phd|phdHtm|89930-3.3146,86,128,187,219,260,296,337,359,394, 416 MAWFPFWQRWQQWLRSRHYG
44d101939011in4|ali|phd|phdHtm|39910-1.5550,95,119,147,186,226,249,299,321,352, 385 MSNEAPMETIPVDYGTLTPP
45d101800911in2|ali|phd|phdHtm|46440-4.6744,104,127,164,210,244,286,330,377,407, 438 MAMSKPNLRKLMENLGQKLQ
46d101888111in2|ali|phd|phdHtm|37231-3.1325,47,82,110,149,181,242,274,314,339, 368 MSTKSKIFLVLLVFCPLSFA
47d101135311in1|ali|phd|phdHtm|44520-2.0245,69,113,166,190,249,278,315,337,372, 395 MGKLPPIFHCLRNRLFAQLY
48d101736211in1|ali|phd|phdHtm|58531-3.1450,124,179,208,273,320,386,450,472,513, 549 MINFFSTHIDRLGDWYPQLY
49d101839211in1|ali|phd|phdHtm|35611-1.9323,66,96,135,157,196,236,258,292,321, 351 MNSFLIIIFRLYLPISVAIL
50d101768511out17|ali|phd|phdHtm|442919.6962,98,150,176,212,252,287,317,339,378, 406 MKPKNFPLARYVLGAMLAFL
51d101954411out11|ali|phd|phdHtm|909111.6256,305,343,403,431,492,763,785,809,858, 893 MRINSSSKNRTQKKLGIPSM
52d101770011out5|ali|phd|phdHtm|3589011.2125,69,101,132,160,187,211,244,271,311, 340 MLGGQYYLIAFILAVIVVWF
53d101102911out3|ali|phd|phdHtm|698000.2730,52,123,145,178,201,241,287,315,356, 387 MDGLFAPIPSNPLIDFTILL
54d101769511out2|ali|phd|phdHtm|433727.0786,117,161,187,211,260,291,330,362,388, 417 MVCSIVTAIFKPKKPSCLPP
55d101101311out1|ali|phd|phdHtm|494515.1649,92,137,189,212,262,302,329,368,391, 432 MLVAMSMTPIAILFSTPLKR
56d101127811out1|ali|phd|phdHtm|487828.4223,62,100,150,201,273,307,347,373,443, 466 MLSLINVLFAFITIAILILA
57d101142911out1|ali|phd|phdHtm|861000.4769,99,127,166,220,268,292,391,431,458, 493 MAADSSSPPVSSPSSTSPSS
58d101865811out1|ali|phd|phdHtm|527202.2135,59,81,114,139,188,212,259,296,327, 396 MDTAVNESLSISYNLEQFLI
59d101875811out1|ali|phd|phdHtm|474515.4173,117,140,163,219,244,267,306,393,427, 453 MVSPISIWRSLMFGGFSPQE
60d101806410in32|ali|phd|phdHtm|44292-12.4745,96,143,170,201,236,289,336,396,420 MVVSRDKAPSAQETFLQMAQ
61d101900210in16|ali|phd|phdHtm|39390-9.7947,84,111,145,175,205,227,305,341,369 MITAANLLRIIFPFYDPEVL
62d101135110in10|ali|phd|phdHtm|105410-1.5135,373,402,466,498,554,890,933,986,1020 MLNTLLNQILKTSIAQRWFI
63d101770910in3|ali|phd|phdHtm|61220-2.9333,55,79,128,164,204,444,480,526,603 MAFLQTWLADYQIPLTLAVI
64d101852710in3|ali|phd|phdHtm|45112-1.3049,89,194,227,263,300,340,364,402,427 MAADFETSNRRWLDKLPRNL
65d101913810in3|ali|phd|phdHtm|38393-11.9540,73,111,160,187,221,261,291,321,350 MVNRINPKAIKAGGTLNLFE
66d101740710in1|ali|phd|phdHtm|38710-1.1945,69,91,125,163,198,287,310,346,368 MWAALTLWFLLTTITAHDRG
67d101765910in1|ali|phd|phdHtm|44311-1.5131,80,111,144,166,220,261,286,374,430 MPTIRINKLTDPVVFLHILF
68d101776810in1|ali|phd|phdHtm|47710-1.0231,79,123,166,206,271,358,394,422,461 MLNQFPKLRLTPFTTGIVAI
69d101927010in1|ali|phd|phdHtm|33092-14.0435,57,91,121,147,193,220,258,281,307 MQIESKTNTNIRSGLTLIAP
70d101817110out22|ali|phd|phdHtm|731404.5567,154,292,350,391,435,532,590,661,723 MATKFPKFSQDLAQDPTTRR
71d101817010out21|ali|phd|phdHtm|751505.3093,177,312,370,410,455,550,608,686,747 MTISPPEREAKAKVSVDNNP
72d101151510out19|ali|phd|phdHtm|541606.5426,60,106,133,182,221,251,300,339,375 MTSIDTLWLLLCAGLVFFMQ
73d101922310out13|ali|phd|phdHtm|540101.1453,96,128,155,194,224,273,323,375,401 MIKLPVLLADINIQSLPTEP
74d101086310out4|ali|phd|phdHtm|326202.3537,63,88,112,156,184,224,254,295,319 MSPRQLNFLSAFSLSVAIAV
75d101866110out3|ali|phd|phdHtm|5589114.0423,86,155,191,271,300,395,434,502,548 MLQGFVQIALILAILVATAP
76d101111310out2|ali|phd|phdHtm|539303.1334,123,145,175,204,250,300,332,355,385 MNKLPKITNTNNEFFVSILA
77d101824710out2|ali|phd|phdHtm|498101.1443,66,109,136,178,200,240,287,325,382 MINWTILKREWFRNTKEDLL
78d101126410out1|ali|phd|phdHtm|418515.2051,86,108,138,203,228,289,342,376,402 MSEPKPSQPNFSHLEEADYT
79d101785910out1|ali|phd|phdHtm|7099011.4250,78,321,357,379,409,439,462,504,527 MRFHPLALICLSFILGLLGT
80d101849210out1|ali|phd|phdHtm|490404.6130,82,107,132,195,232,294,343,365,389 MKLTWLNSSRRLISVIIYLT

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