--- -------------------------------------------------------------------------------- --- --- All proteins with at least 3 transmembrane helices in Synechocystis PCC6803 --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 345 d1018306 3 in 236 534 2 2 -2.86 36,126,224 MGRMAKYIGAGDVRSILIMA HQELMAHQGRYARFHAQQFA 346 d1011233 3 in 28 155 1 5 -1.70 25,57,102 MVQSTVELWQKNLHRAKQAR LGHRFHQPVQPDQESINHGH 347 d1018685 3 in 10 199 5 6 -5.04 42,69,189 MPSTFSQPSPSNALVNDRRD FLLWGSQLAIVLLLWSSPPL 348 d1018852 3 in 7 300 9 2 -12.30 25,67,109 MSRKNLILLAVYIVFTVGAS KQTPTTPLKSGWPTVPPGTR 349 d1017735 3 in 5 109 9 7 -10.01 46,72,103 MQRTRLNTIVEVRGQQLSQF LNIFKMGVSYSLFLEAFKLG 350 d1019076 3 in 5 117 8 6 -8.18 48,81,113 MSPPLPLLLPSSQTAVSQDL FSVALLLLLIAGLLMGDVVS 351 d1010729 3 in 4 462 8 2 -8.44 71,112,341 MSHSRFKSAKSAMRKLKTEQ HQVRHDPQRLARVLMRWYGG 352 d1011051 3 in 4 198 1 6 -1.24 68,131,184 MEVDGIWLRLIWLDYRLAVI MYFLSFLIFRLGRQGRSALD 353 d1019563 3 in 4 170 2 5 -2.63 45,73,130 MNQFRDWGFSTDWWQGKKGE DKFNDYGNYRDQVKKLIPWL 354 d1011034 3 in 3 257 1 2 -1.54 53,158,254 MGLMTLETYVPGRSPIHGWE LGLTVIVLAIAVGFVVAEVS 355 d1011276 3 in 3 173 2 7 -2.52 66,97,172 MKPMRESSPQICPVPIDQQP KLLGATMAIDILIWTIFRFL 356 d1010817 3 in 2 121 4 9 -4.13 34,62,105 MKIDYKLTLLLFCLCVPGVI LIGVACSHYHWFSLSFAPST 357 d1018582 3 in 2 137 1 4 -1.59 28,89,130 MTKTELLWPALITALATMLY MILVVGALLSILWQLRQLSQ 358 d1018691 3 in 2 316 0 3 -0.33 90,119,213 MPKNMSPICPVCGQENDAAN RMLATVKAVLPQLQQFISGE 359 d1019382 3 in 2 261 1 2 -1.54 76,120,152 MTQVWFPSKKSATSVKSTGQ SPIRQEPLSIPQRQKQRQAI 360 d1010950 3 in 1 219 5 1 -5.19 144,174,213 MTSPPTPDQAADEYFEYHFA TIILALLLLLQFFRVIFQQL 361 d1011176 3 in 1 496 5 2 -5.72 37,241,278 MPRPFDRSKKHLAVPLWYER INYLQKLSEADIERILGNTV 362 d1011491 3 in 1 150 8 0 -8.97 20,49,112 MKNRFVALIFALLFGSFGLH RKGFLLPDNREGDYAVVYRP 363 d1017475 3 in 1 481 9 1 -10.00 370,412,435 MADSDHYPRPTSCPYPVQRF VMRNAFQEAQNRFKNPPSGH 364 d1017672 3 in 1 424 9 1 -9.43 96,124,305 MKLTILNQFYPPDYAATGQL DEEVAKLQANKFCNHPDSSL 365 d1017734 3 in 1 246 8 1 -8.33 18,61,90 MASLISFWLFFALSLLQPQQ SSGMGIKLELTLWQKLFWPL 366 d1017777 3 in 1 394 2 0 -2.84 312,343,379 MLIIAILCLGLLVAQGVASL IIISASQTPKQWRGRIYPGA 367 d1017944 3 in 1 151 3 7 -3.77 33,90,150 MQDFGAVFHNQVLLISLAAC VQVFAGLALGIAIAFFAVPA 368 d1017986 3 in 1 116 9 5 -12.67 21,50,93 MLGPEACIFAAVMIGFLGLI MKLAKENPTLEIAAIEREYW 369 d1019064 3 in 1 314 9 2 -13.72 240,269,313 MDKYSNPENKECVNTVLFAE WGSVIVALYLLFICRVMVFV 370 d1019103 3 in 1 320 1 0 -1.64 131,153,285 MSVKLAVLSLLASTFTLPLL FSGNRCYKSFGTIFDAQGST 371 d1019314 3 in 1 194 0 1 -0.01 68,148,193 MLPPGFYLSSGSAMFKAIFP DMATLATLYTEVLPAAALAC 372 d1019531 3 in 1 401 5 0 -5.24 22,167,357 MNRLRNFAIVFIVVIIRSIS PAKLLLVGDRRWQIVEKGVF 373 d1019016 3 out 57 120 7 9 7.11 28,78,107 MFVLTGYEYFLGFLFICSLV FIAILVVALVYAWRKGALEW 374 d1011533 3 out 44 103 9 9 10.73 25,49,84 MHLQLQYCLILAAALFCIGI VLAIYRNRETTDMEQFNLLK 375 d1018725 3 out 38 1261 1 0 1.46 43,146,174 MFWQPVSPLNADQLNYQGSY NNFDFEAALAALTTARQFSQ 376 d1011474 3 out 33 613 0 1 0.52 552,577,600 MIKRFFLTILFFAGLWFALN FLVVNALICLGLGSLAAKGE 377 d1011241 3 out 15 254 5 5 5.43 57,162,206 MLDNCKRLLFRKFPCFLSMA VWYEPHQPMPNLLMAARIAE 378 d1017337 3 out 12 210 9 6 11.60 23,126,170 MAGGIVAVPLLGFSLLAVAL IELVYRRFHDQPEEKEYATS 379 d1017988 3 out 12 130 3 0 3.66 50,72,109 MTGLLDIGLRLGIWFLLTGN LKYHEEGWYEIHYLGPKKEE 380 d1017691 3 out 10 227 9 5 9.32 32,132,176 MNPIELMQKGGVAMWPLLLL EEEMAYDDGLTPSPEAESLP 381 d1017625 3 out 9 184 3 6 3.78 34,93,116 MPAGKIHDRITLGATPAVMA KLKPQQKKHSSQGKSKSRRR 382 d1011431 3 out 7 103 5 5 5.16 32,56,93 MRLQQAPHPCMQYQVAMAGL GLIVLAGPAVVFVLAFRGGD 383 d1018977 3 out 6 384 9 2 18.16 42,116,334 MDFGIGFISTNIMLPILDFF TQGRESLPFEKKSSKKKEKT 384 d1010845 3 out 5 234 0 3 0.04 53,80,117 MEWNESLLRLTVAFVLGSTL KLSLNPSVKSVSWQALEQES 385 d1011505 3 out 5 92 9 0 9.55 37,60,82 MDWQLFGLSFITVFLAEIGD ALAALGFTIMALRLLWPNQE 386 d1017474 3 out 5 148 8 2 8.55 71,116,138 MTPPTPSSEGQNFPSAPAPK LTYKAAIIFYMLQSVFTPAA 387 d1011236 3 out 3 505 8 1 8.13 74,112,134 MIAQINPPPQGPGPQAIANV VEWIRQRINKIFGVSQESAY 388 d1017458 3 out 3 266 0 3 0.93 51,86,141 MALFNHYQVETPESVELEFT EAVYLACQDRQTTLTKPKFE 389 d1017891 3 out 3 365 7 2 7.31 47,69,99 MGLGSSSQENLLNLIDRQGR ALNQLLCPLNPARVRLPKNH 390 d1019233 3 out 3 396 3 0 3.71 40,284,323 MFGGSVNGKFDQSGTKNLAF SLSVPVINNHNGSVKIHGTN 391 d1010683 3 out 2 210 8 8 8.85 109,150,192 MASISGAMEDWVSAPDRFRN FGLRSFTWLAIRKQRSKIRS 392 d1011179 3 out 2 416 1 0 1.09 240,276,336 MLCPVSHLADLRQQVPFDLA IEGKISNEQEALAYAQELGK 393 d1011229 3 out 2 337 9 2 18.69 26,56,78 MVNFGLNSASILGIFLAVAG RSPVDGEEPPIGADDQERFD 394 d1017990 3 out 2 98 7 9 7.25 29,61,87 MITTIINWLTNGFLAMGILF WNTILGYVLAYCATGEKRTN 395 d1019271 3 out 2 154 2 2 2.51 28,54,131 MATELLFNLSNVFVLPFWGL ITKQWGKGNDSTMETPQTEI 396 d1010803 3 out 1 135 6 9 6.25 34,61,100 MTNTKTTPTVKILREFAWIM QQVTYRSPCRPRDISHLQKP 397 d1010806 3 out 1 498 0 1 0.64 31,301,328 MVQVGAAAINRVDVAVIGGG LVASPYPHQLLASYWKNNAN 398 d1010838 3 out 1 217 2 1 2.38 48,104,137 MVTLDKTATKIIKLNSGAIP ISFDDLRPLIPEIILPSHLM 399 d1011012 3 out 1 104 9 9 19.23 29,59,89 MNALSIPTWMVHVSSVIEWI TLCLAAWWIYRQSAQPSAPK 400 d1011295 3 out 1 318 9 4 10.27 79,126,160 MMLDTTFLSDFFTLNRNTFA AFGQQGLPYPRLKLGRDESD 401 d1017462 3 out 1 172 2 3 2.79 51,111,141 MQLLSTNVDSDAKPTLLYFS PEREISRRHQIRQSGKESPS 402 d1017505 3 out 1 241 1 3 1.00 38,61,84 MQLPPVHSVSLSEYFVSGNV GQVYINQLLLTLFPERRYFS 403 d1017607 3 out 1 125 9 8 13.12 35,75,102 MEILDHYLGNLVSITRFVLE GKELESEIRMEIEQERQEHG 404 d1017624 3 out 1 285 4 0 4.25 176,249,271 MEETVLDELRSALELATEDE IPVIFTLAQIRLTRETCWQL 405 d1017742 3 out 1 440 2 3 2.72 120,327,363 MIVASEGSGMSVAFNPQIMT YRTDQDSLEQEFKRFTPTQG 406 d1017890 3 out 1 269 2 5 2.97 49,136,165 MPSTNFFVPSIQHGYVCQKT KGYGYLAIAKDSSDEDKWLK 407 d1017989 3 out 1 97 2 9 2.38 35,59,85 MVRNSLSWPQEGRKMTVLLW LSAGNAALMLLAQLIRRMEA 408 d1018127 3 out 1 844 9 0 13.64 52,78,107 MAITAFTLGDFFQANSYIPH LQGELHYEYVGGAQFGLEFS 409 d1018474 3 out 1 126 1 4 1.34 28,90,114 MLMDWIPFEIPINTAMIAGA LAILTVFTGAVYALGKQSSN 410 d1018647 3 out 1 414 4 0 4.74 29,253,302 MTKPLPYDLIIVGATGFVGG LIHRLIDYAGLTFTEENGST 411 d1018692 3 out 1 416 0 1 0.00 84,172,269 MIDFIKKKESLLIPRKSINL HTPTAGAKFCGNCGFVLGVK 412 d1018953 3 out 1 358 0 0 0.71 180,253,345 MVSTTLPTQLETIRPGIKAP QMICIFLQKPVDAEARRGMV 413 d1019092 3 out 1 408 9 2 11.54 95,286,318 MTTWVRPVVQALRQLLGYSH AELVAEQIAVQQTPVRMSLT 414 d1019236 3 out 1 568 3 1 3.23 133,257,315 MKPHIIVCGLGQTGYRIFSL ALEQLWRSPRATADPLDSFL 415 d1019454 3 out 1 162 2 7 2.18 35,70,144 MFTLNDQNLPYPDTLHPIIV DWVYGLHTLPVVQATKDGII