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Transmembrane helices for syny3 (Synechocystis PCC6803)-- Low Reliability Report
Jinfeng Liu & Burkhard Rost
CUBIC Columbia Univ, Dept Biochem & Mol Biophysics
| num | id | nhtm | top | nali | ali|phd|phdHtm | len1 | riTop | riMod | topD | htmCN | seqN |
| 17 | d1011121 | 2 | in | 62 | |ali|phd|phdHtm| | 324 | 2 | 1 | -2.67 | 38,138 | MNILEYAPIACQSWQVTVVG |
| 18 | d1010913 | 2 | in | 34 | |ali|phd|phdHtm| | 397 | 2 | 0 | -2.73 | 222,347 | MNYMMTDNEVFKEGLAGVPA |
| 19 | d1011499 | 2 | in | 25 | |ali|phd|phdHtm| | 176 | 9 | 4 | -12.21 | 84,134 | MTSPSPLVGIIMGSDSDLPT |
| 20 | d1017789 | 2 | in | 17 | |ali|phd|phdHtm| | 1462 | 9 | 0 | -9.02 | 40,300 | MVISATVISMKSPLRRLLLS |
| 21 | d1017813 | 2 | in | 17 | |ali|phd|phdHtm| | 434 | 1 | 1 | -1.47 | 152,198 | MTRILKLSHLTPQQLNQLKR |
| 22 | d1017666 | 2 | in | 15 | |ali|phd|phdHtm| | 164 | 9 | 0 | -24.23 | 27,53 | MASFLALLPRSLTTFLYAVA |
| 23 | d1018956 | 2 | in | 15 | |ali|phd|phdHtm| | 674 | 3 | 1 | -3.98 | 34,327 | MVSIIKSVRRSLLLKFVLSY |
| 24 | d1017671 | 2 | in | 8 | |ali|phd|phdHtm| | 146 | 3 | 2 | -3.97 | 54,117 | MQLNQYQQGEYHPGAPLFKQ |
| 25 | d1017528 | 2 | in | 7 | |ali|phd|phdHtm| | 394 | 9 | 2 | -13.68 | 30,270 | MKYPTWLRRIGGYLLAFAVG |
| 26 | d1018739 | 2 | in | 7 | |ali|phd|phdHtm| | 416 | 9 | 1 | -11.42 | 31,290 | MAIHLKASHLGVAVLLLLFG |
| 27 | d1019526 | 2 | in | 7 | |ali|phd|phdHtm| | 300 | 6 | 2 | -6.81 | 46,92 | MKTDKWFYELFLSQPGMMAE |
| 28 | d1018904 | 2 | in | 6 | |ali|phd|phdHtm| | 454 | 4 | 0 | -4.18 | 199,296 | MNSKLSLFDIRTFLESCLLS |
| 29 | d1019073 | 2 | in | 5 | |ali|phd|phdHtm| | 385 | 6 | 0 | -6.31 | 133,183 | MAPSISPVTQPLVSMAIAPT |
| 30 | d1018882 | 2 | in | 4 | |ali|phd|phdHtm| | 193 | 1 | 2 | -1.82 | 58,119 | MIKNDIWIRAQAAQGMIEPF |
| 31 | d1019007 | 2 | in | 3 | |ali|phd|phdHtm| | 146 | 8 | 4 | -8.42 | 27,67 | MFLTALRSFLLFLAVTCLSL |
| 32 | d1017696 | 2 | in | 2 | |ali|phd|phdHtm| | 409 | 9 | 0 | -11.94 | 150,177 | MLRLITQSGDIVQELRRLHH |
| 33 | d1018730 | 2 | in | 2 | |ali|phd|phdHtm| | 294 | 9 | 0 | -11.62 | 182,233 | MLRATSDRSPLFECNPALDG |
| 34 | d1019321 | 2 | in | 2 | |ali|phd|phdHtm| | 254 | 1 | 1 | -1.94 | 181,238 | MIIRELYSTDISDSQWQLVE |
| 35 | d1011156 | 2 | in | 1 | |ali|phd|phdHtm| | 397 | 5 | 0 | -5.21 | 46,183 | MMELNFFLRNQNLCVYSPST |
| 36 | d1017417 | 2 | in | 1 | |ali|phd|phdHtm| | 372 | 9 | 0 | -20.00 | 23,55 | MPNIAVIGAGVVGAAIAYEL |
| 37 | d1017837 | 2 | in | 1 | |ali|phd|phdHtm| | 275 | 8 | 0 | -8.00 | 21,101 | MLPTAIVLTILLGIIAYIWG |
| 38 | d1017984 | 2 | in | 1 | |ali|phd|phdHtm| | 114 | 9 | 4 | -12.10 | 29,91 | MVALEACIFVTVIIGFLGLI |
| 39 | d1018019 | 2 | in | 1 | |ali|phd|phdHtm| | 715 | 3 | 0 | -3.52 | 453,682 | MIEDNQSHNENIKEYLNYYK |
| 40 | d1018028 | 2 | in | 1 | |ali|phd|phdHtm| | 352 | 0 | 1 | -1.00 | 128,207 | MLLTTSGEKSMPRRSLISLI |
| 41 | d1018374 | 2 | in | 1 | |ali|phd|phdHtm| | 335 | 9 | 0 | -9.75 | 197,231 | MQRRDLFKYGLATGAGAIAS |
| 42 | d1018560 | 2 | in | 1 | |ali|phd|phdHtm| | 160 | 6 | 4 | -6.17 | 28,65 | MNIRPLVSSLSALAISVALL |
| 43 | d1018839 | 2 | in | 1 | |ali|phd|phdHtm| | 439 | 5 | 0 | -5.29 | 234,287 | MDWSAIAASLTTQGLEVIQD |
| 44 | d1018863 | 2 | in | 1 | |ali|phd|phdHtm| | 451 | 3 | 0 | -4.00 | 105,195 | MGETVMRLNAKAKSFLTKEI |
| 45 | d1019187 | 2 | in | 1 | |ali|phd|phdHtm| | 1168 | 6 | 0 | -6.00 | 157,508 | MKKFVVIDHSLCNLQGHHYE |
| 46 | d1010682 | 2 | out | 15 | |ali|phd|phdHtm| | 327 | 1 | 1 | 1.64 | 172,264 | MLVWLPWGVELARFSQFSLN |
| 47 | d1011450 | 2 | out | 15 | |ali|phd|phdHtm| | 395 | 1 | 1 | 1.65 | 61,238 | MTSSEISLISGKTDNFPGHQ |
| 48 | d1010834 | 2 | out | 6 | |ali|phd|phdHtm| | 394 | 2 | 0 | 2.41 | 117,348 | MVKRISILGSTGSIGTQTLD |
| 49 | d1017704 | 2 | out | 3 | |ali|phd|phdHtm| | 331 | 2 | 1 | 2.01 | 126,191 | MVYAPRPLPSRSLPVPASVS |
| 50 | d1018175 | 2 | out | 3 | |ali|phd|phdHtm| | 413 | 3 | 1 | 3.50 | 154,340 | MAIAYVVKRYPRYSETFIVN |
| 51 | d1010893 | 2 | out | 1 | |ali|phd|phdHtm| | 286 | 4 | 2 | 4.64 | 96,126 | MVDNNQAQAILRQYQVGERN |
| 52 | d1010973 | 2 | out | 1 | |ali|phd|phdHtm| | 497 | 8 | 1 | 8.00 | 85,284 | MSMQFMETGMPDLLNSPQAI |
| 53 | d1010984 | 2 | out | 1 | |ali|phd|phdHtm| | 267 | 0 | 0 | 0.00 | 107,189 | MESLNPISLQELLAGYVLED |
| 54 | d1011259 | 2 | out | 1 | |ali|phd|phdHtm| | 244 | 9 | 1 | 19.00 | 79,101 | MQLHLSTWPEVENYLQSSSG |
| 55 | d1011401 | 2 | out | 1 | |ali|phd|phdHtm| | 126 | 7 | 3 | 7.18 | 81,124 | MMDYSRIEKWREIVMSVYLM |
| 56 | d1011417 | 2 | out | 1 | |ali|phd|phdHtm| | 164 | 9 | 0 | 9.55 | 42,130 | MIVVSDTSAIANLAIVDHLW |
| 57 | d1017570 | 2 | out | 1 | |ali|phd|phdHtm| | 264 | 8 | 1 | 8.07 | 144,190 | MFDNLCKFLAESFSEDYAAW |
| 58 | d1017588 | 2 | out | 1 | |ali|phd|phdHtm| | 409 | 4 | 0 | 4.00 | 80,270 | MPWHSGLDCWDNGLYYGLLY |
| 59 | d1017854 | 2 | out | 1 | |ali|phd|phdHtm| | 283 | 5 | 3 | 5.48 | 65,112 | MKISEQTLEVGQFHWFYRQI |
| 60 | d1018166 | 2 | out | 1 | |ali|phd|phdHtm| | 431 | 1 | 0 | 1.85 | 59,256 | MTTLTPKATLPPSTHPFADV |
| 61 | d1018482 | 2 | out | 1 | |ali|phd|phdHtm| | 270 | 2 | 1 | 2.12 | 33,84 | MVFKLNLHARFVFQNLFSPC |
| 62 | d1018757 | 2 | out | 1 | |ali|phd|phdHtm| | 56 | 9 | 6 | 23.33 | 22,56 | MPDFQAFIAIITTILVFAIG |
| 63 | d1019406 | 2 | out | 1 | |ali|phd|phdHtm| | 253 | 1 | 2 | 1.99 | 150,226 | MVIPTLKAPNRNGRASIIVN |
| 64 | d1019423 | 2 | out | 1 | |ali|phd|phdHtm| | 275 | 6 | 2 | 6.05 | 25,243 | MDNATITAIATGLLVVVGIA |
| 65 | d1019553 | 2 | out | 1 | |ali|phd|phdHtm| | 174 | 5 | 5 | 5.67 | 136,173 | MPSNSTYFIMTKVSEIKYKE |
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