--- -------------------------------------------------------------------------------- --- --- All proteins with at least 2 transmembrane helices in Synechocystis PCC6803 --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 416 d1019485 2 in 57 84 5 9 -5.91 37,71 MSNPEGYNVWSDKPRWCQPW LVRQAIAMELDHSPNSQAKS 417 d1017420 2 in 17 663 2 1 -2.39 46,218 MGTSVSNPTAILQTMQGFLR GVGTTFWFDLAVYQSMLMVV 418 d1018360 2 in 15 328 9 3 -13.54 41,312 MRNPDTLGLWTKTMVALRRF QILLVLKKKQIEKVQAAELN 419 d1019171 2 in 13 392 4 2 -4.02 63,217 MLNPNLAEIELSQDDYQRYS INVKGGITAWSREVDPSVTE 420 d1017445 2 in 12 188 9 7 -11.85 46,88 MGGQTLAESSQVLRQEVLGA SQLENQGAELARFLGVPLEG 421 d1017669 2 in 11 136 9 5 -22.40 28,54 MASFLALLPRSLTTFLYAVA PSPDTRAALIDFLSFLQEYG 422 d1018301 2 in 11 107 5 9 -5.72 69,105 MCFPQGTYFGSLLRERFNDN LGSGIWAILVIVVALLNFLV 423 d1018588 2 in 10 179 7 6 -7.46 144,166 MASSTQTNVTIAPKTLQQLR LSGTCMMANLLGKLPYNQIK 424 d1011245 2 in 9 806 8 1 -8.09 36,215 MVQEKPRFTRPLRYQLLAGC KPVRFHRLMEIVREETCPVP 425 d1011359 2 in 9 458 3 0 -3.75 35,202 MQNNRLFNLSRWRLASYYAG IRLSICPPPYQQSRECTKNL 426 d1019342 2 in 9 331 6 5 -6.48 267,302 MVTNSPSRSDISVYNGDRQG DEVKGRPLYTLAEMAGFEQL 427 d1019442 2 in 9 279 7 4 -7.48 210,258 MVSGPVFQFSAPMTPDSLQQ ILRTVDRLQSKSTMANGGQG 428 d1011485 2 in 8 318 6 5 -6.37 251,283 MTIELSIVIPMYNEEDNLEH RPLYLVSDLWGLEYLPLEKL 429 d1018242 2 in 8 495 0 2 -0.79 390,485 MDLLCTRPGCARLNSFPDLD VATIALFLLILKLLFAVLTR 430 d1018326 2 in 8 145 9 9 -9.12 52,94 MVKSARQGAGGFWRDFKDFI NLTDSINRLITTLENQQSSS 431 d1018118 2 in 7 452 9 1 -10.49 73,328 MSAQAVFPIAPHRADFFPRF RNGQQQNLTVTIGALPSAPP 432 d1017614 2 in 6 158 9 1 -13.53 97,119 MADPTNRDRLPFERKSKKKK LSRTIAVWRNAQQTAQDNGD 433 d1018601 2 in 6 201 8 5 -8.43 45,80 MTNFPPLLREAKRDNRSIHF SPHRRQLENILALLDEYGDT 434 d1010930 2 in 5 175 3 9 -3.67 111,170 MKSVYPMSSPSSAVFADQGL AIAAVIVGGCLLLPPLLSLM 435 d1017898 2 in 5 3972 2 0 -2.00 457,1855 MSITLSDRLSAVVQDSAGTS MVGGGDLDYNDIILQFSFLT 436 d1018215 2 in 5 65 9 9 -14.09 23,52 MTPKSGILLLLSCVSAIAAV SIPLTALFFWIAVQDTRANM 437 d1011428 2 in 3 270 0 3 -0.26 21,49 MKLAWFWLLILVGLLTACGV QFLASEEAQKVFSQYGFGPG 438 d1011481 2 in 3 303 1 4 -1.04 32,87 MSGFPPDLTSLLPFFHGALD SWGILRRLLWLPSSTAQNDK 439 d1011516 2 in 3 356 9 4 -12.70 35,81 MQDSNQRLKLGVLFFVVTLV EQYQFKRKQLKARWQEAALT 440 d1018857 2 in 3 121 4 3 -4.86 40,71 MFFCCPLFPFVIPGKTTMRR TPEEREKLQAEVVEEKDTSS 441 d1019480 2 in 3 149 9 0 -9.47 51,73 MEFTFLLPLTIGLIVGYKAW NEVKGKAIKYRGVDIGTKTQ 442 d1019508 2 in 3 371 5 2 -5.00 135,289 MGLSKACVVFNGYLGKMTEP ADLDSAEQLAAIVRASVEKS 443 d1010677 2 in 2 169 0 5 -0.21 28,89 MSSFLVFSWRRWLQILILAI ERAEGVNPVTGVATRDSLGC 444 d1010971 2 in 2 151 9 1 -21.86 28,56 MATFLALLPRSLTTFLYAVA NPDTRSALTDFLSFLQEYGE 445 d1011010 2 in 2 441 0 0 -0.10 32,181 MFQATRRRLALWYTLVTAVL VTSSPQGSQFRVQLPSAAPL 446 d1017585 2 in 2 134 8 8 -8.33 71,104 MLDFFCSGKGWWFQLGGNGN RRRGVPSQQQLDREFDFDDL 447 d1018217 2 in 2 318 8 4 -8.27 258,290 MSTSFSSAYRLAVLVPCRNE GRRELKRMAYLRIPRVEIKE 448 d1018279 2 in 2 74 9 5 -9.26 45,67 MNEPKQTETVQVVEKVSAIL LSWHDVQTGVEKVKGFFAEK 449 d1018743 2 in 2 491 6 2 -6.00 21,65 MTSAYILVLSVLVLGGIIAA VVGPLKIRIIALRGNQIMFE 450 d1019247 2 in 2 249 0 3 -0.44 91,127 MGQFLPRPRPLESKKGLAKR EPLGPQPLLAQLIATELQRF 451 d1010718 2 in 1 338 7 0 -7.67 122,302 MISNFGHIVKTYLSNFPKDD LQAFMCEKISYVHWLRELAL 452 d1010751 2 in 1 459 7 0 -7.63 34,200 MSRFCPRFRLWGRLVPGVIL RNPELSHPYYWASFSLIGNP 453 d1010849 2 in 1 182 9 6 -10.64 53,130 MYDDDQRRDRRLPLAPLERR LRLKKFWFDLKKQWDNRQRR 454 d1010908 2 in 1 107 3 9 -3.86 43,90 MSEDSPKPEKKEPVPPTPLR LILLMVQLILQKQPDRNNGE 455 d1011047 2 in 1 101 9 2 -12.71 62,86 MTPSDYQDQEVKTPKVEVVD AILLVILYGVYRVFLRQDKG 456 d1011091 2 in 1 1319 3 0 -3.73 299,1293 MSQQNYNWKRFWCPRSGNIS VLKDSLNGSPSKIEQQAMPK 457 d1011148 2 in 1 184 9 5 -9.21 31,53 MLPKISLAAVGLTVGGILTI TVAEPEEKVVTVNLISQLAL 458 d1011213 2 in 1 317 7 1 -7.62 30,297 MVYHVRPKHALFLAFYCYFS KWGYERGLVRFGLLTGIKPL 459 d1011246 2 in 1 350 0 1 -0.26 47,173 MLAGIGALIRFANSLNISQT LIIRDDIVINSRLFSQAVER 460 d1011302 2 in 1 510 5 3 -5.95 37,207 MMFRPLSRAIQVAMYYPIRI MAYIGDSRVFDDITLVIFKK 461 d1011310 2 in 1 495 6 1 -6.00 121,269 MITSMPRRPKSRRTQRRNLR SPAQPPAKQESPATAPVEPS 462 d1011396 2 in 1 380 9 3 -14.32 323,361 MPNKPQFRQSNLVSHFNYFN LYFFWRKGWFRNLNDVEKGN 463 d1011479 2 in 1 387 1 3 -1.30 338,371 MPQTQPGIEDFLLRQLRHPQ GSLYFFWRKGWLSPSYDLGE 464 d1017373 2 in 1 83 9 9 -11.46 29,69 MKTLLLTWLDRILIADVFLV GAVSSWGIKKLSQWFTTKQG 465 d1017409 2 in 1 132 1 0 -1.55 48,110 MASTPIQSEARTDLEPSFVI DPGTLKACLERHCPLQSLRA 466 d1017477 2 in 1 382 9 3 -10.50 33,262 MGLDPPLPMLFKSRRNLVIL AQLPPSSSNPSGKVLKSSAA 467 d1017719 2 in 1 295 5 1 -5.48 143,182 MSKPIFKLVDDLPTGGLTVM YEHTGIQTLAHRLIERAVAE 468 d1017782 2 in 1 456 9 1 -10.57 30,196 MLRPRTIKEGSVGLFALLGL PSPQIQTPKIKPPQPKENQG 469 d1017803 2 in 1 298 9 2 -9.43 18,50 MGAVISAIAALASWTVFITV NTKVLIMGSGEGNLPIIMSD 470 d1017834 2 in 1 254 5 2 -5.14 50,123 MGNIFFPWVGTMDKYEGLES GQQAILSRQGKTRYLEVGQG 471 d1018105 2 in 1 361 0 1 -0.63 284,330 MPPLQLLRSLSALPDINPVV SYFKRRLENLQQLGSTDWQL 472 d1018164 2 in 1 127 4 5 -4.38 46,68 MNNFSPKFVTVNQSGLGCGL TPPGTIDVQAVDVSVKALDE 473 d1018207 2 in 1 413 9 1 -10.00 314,336 MNVLFLHQNFPGQFKHLAPA LQTICLPQQLQWLENLVSPQ 474 d1018351 2 in 1 89 9 9 -14.21 53,80 MDVLLDRLTTETLQWNVRLE VAATVIGFWLVISILRSGRL 475 d1018375 2 in 1 295 9 2 -10.00 131,153 MNSPFIPIALPSSFEHTYTD EEAPEEIFQAILTTFATTKE 476 d1018390 2 in 1 338 7 0 -7.67 122,302 MISNFGHIVKTYLSNFPKDD LQAFMCEKISYVHWLRELAL 477 d1018394 2 in 1 333 6 1 -6.65 32,330 MQSWRHRFLSYVLLACLSCT LFVGGLVFTLAASFGLLLIK 478 d1018519 2 in 1 469 9 2 -14.58 424,446 MTSLLTSSAQAPVANAPFPA KFKQSFYQGNPIPPRNILDK 479 d1018592 2 in 1 140 9 7 -11.29 37,124 MQLSFQERLESIKAGCLGAT AVVRSSLDWAMARDWLRPFK 480 d1018663 2 in 1 85 3 9 -3.33 47,77 MPFPQRFFPTFSFTPTPMFS VIIVLGLAVYLAMVIIEPER 481 d1018847 2 in 1 75 8 8 -8.89 32,59 MAMDKDTKFALLVMGIPLLG ISGTIWLRASFKARKEENLG 482 d1018888 2 in 1 338 7 0 -7.67 122,302 MISNFGHIVKTYLSNFPKDD LQAFMCEKISYVHWLRELAL 483 d1018933 2 in 1 283 1 3 -1.33 29,131 MGFRRYQSLFAWILTVVLTA GLDPQAYSRRIGRQSSAPTL 484 d1018965 2 in 1 249 3 5 -3.67 40,241 MEFHRQLPMTVAPHHPFNLS LALATLIPMVTYFWYVGLPG 485 d1019052 2 in 1 179 3 6 -3.50 121,163 MDKLLKIAQLIDQFTAWIGK IAEVIKNLAIALGHVDTEAR 486 d1019105 2 in 1 338 6 0 -6.85 122,302 MISNFGHIVKTYLSNFPKDD LQAFMCEKISYVHWLRELAL 487 d1019127 2 in 1 152 9 7 -16.67 33,55 MSPVYLWIVAGTILCLVEVI TLLVYPANALQGRSDIQHPN 488 d1019180 2 in 1 338 7 0 -7.67 122,302 MISNFGHIVKTYLSNFPKDD LQAFMCEKISYVHWLRELAL 489 d1019313 2 in 1 406 9 2 -14.29 63,85 MRKQRSKENWSPFSILINSR VGKDLSQQLQRPPNFSPRIV 490 d1019375 2 in 1 636 7 2 -7.69 32,55 MAIANSRFRPWQVGILILPI WTQNLTVEQLGVRFRHYCEL 491 d1019394 2 in 1 633 1 1 -1.41 47,326 MEPVTVGQKVLKPAVGLINQ RNFLGDQPAEDDVTLLILKQ 492 d1019464 2 in 1 338 7 0 -7.67 122,302 MISNFGHIVKTYLSNFPKDD LQAFMCEKISYVHWLRELAL 493 d1019477 2 in 1 230 9 5 -10.17 53,78 MLIPLTQETFDQVVPVIATG EFGSPIPRRRRQPTPSSRRL 494 d1019600 2 in 1 128 9 4 -9.26 70,92 MSTENPIETKSPENNQSLDC PTQEMPMTDKPMEKPMEHSN 495 d1017472 2 out 53 81 9 9 9.40 31,76 MDSTVAAASVIAAALAVGLG ESLTIYGLVIALVLLFANPF 496 d1018021 2 out 50 332 4 4 4.89 66,109 MKIPGSVITLLIGVVITVVS GVQTEALAQLKDQTSPVGDL 497 d1018856 2 out 12 80 2 9 2.41 31,69 MEDLLGLLLSETGLLAIIYL FFPGLLVLSPVLNLRPRRQA 498 d1018841 2 out 11 165 7 3 7.52 105,145 MKHLLALLLAFTLWFNFAPS VGEYTSGKLVMKDSEIPTSP 499 d1019506 2 out 11 157 3 8 3.30 98,146 MAESNQVVQAYNGDPFVGHL VAYFLLENLSVVDGIFRGLF 500 d1011379 2 out 9 79 4 9 4.94 44,69 MRQFCAHFPLVCQKNLIIPT TIFGLYILGLVHAIWVIARE 501 d1019174 2 out 9 243 2 2 2.25 67,234 MTANSSPISVKALRALMRRG DLLIIAKTLGVMLFPNNNGA 502 d1019588 2 out 9 491 0 2 0.00 38,348 MAIATIFAQIWQYCKKPFLH QEPGGFPPEPVLDDSIPVDW 503 d1017574 2 out 6 90 7 9 7.63 26,79 MDLLLSTLVSFINIYLVLLF IFALQFLQQALSSVAGPYAG 504 d1019404 2 out 6 128 1 8 1.36 75,121 MTAIARERGRSKRGIALHRL MSFGHILGAGMVLGLASSGI 505 d1010789 2 out 5 66 9 9 16.29 33,60 MGDFLANVSRYPRYLISFTL LLVSGFIFLYFTLRAMLGLT 506 d1011072 2 out 5 97 9 9 9.38 28,84 MNYAAIVGQGLGILLAVMTV TFLREILIGQQGLITMASRL 507 d1017761 2 out 5 869 8 0 8.74 386,470 MATETNFSQLYGLAYAAYGQ TLVSISRDLLTSVERFRVES 508 d1017452 2 out 4 86 5 9 5.96 37,79 MHSFLLATAVPATLSWSPKV ASFGHILGAGVILGLANMGV 509 d1017564 2 out 4 274 4 9 4.54 119,167 MAEISDPGNGDWLDQAWQED IGQRREIILPGTVSLDYDHA 510 d1018264 2 out 4 79 9 9 11.88 37,66 MVGLGENNLPTKIGAKLTMD ETMGLLTHITAIANGSLLPF 511 d1018469 2 out 4 170 9 7 23.62 28,52 MDVTIYLRWSAYATIASFIF DQIEIKLDRKALRELERNQA 512 d1019345 2 out 4 77 9 9 10.67 24,72 MTLITVLRIIWMASAALLTV WTLSIIFIGLTIILSAGWLA 513 d1011143 2 out 3 84 9 9 19.23 32,79 MTNQYVPNYLAQSILVTLFC AGIIFIAIYFVLVVIAAVFG 514 d1011438 2 out 2 891 1 0 1.33 109,157 MAEAFIAENTAVEDVSPNPN FKELLAVAQSLQEAVKQFKV 515 d1017981 2 out 2 145 6 9 6.64 103,130 MVLGFGAGTKFNPQLTLSQN LLFSFVTTLFNHLDFVPVES 516 d1018639 2 out 2 262 9 5 17.33 32,54 MFVFLSKLLPLFLYPLGLIS MTTMALKEYLGLVIYKLQGW 517 d1018718 2 out 2 74 8 1 8.56 20,57 MLVLSVLSLALASFSAILCF LMAVPFGLERFYRLNQNAPM 518 d1010898 2 out 1 419 5 2 5.83 34,411 MPLPLMMINYSLLLSLALPP GVLGLIIGGLQTGFFLVSRG 519 d1010909 2 out 1 140 7 9 7.31 40,136 MSSFNQITTIFSRKVQIGQL SSVLIAITMIIGLAVGILYL 520 d1010915 2 out 1 267 3 1 3.00 98,196 MEKYNIQVLGNVNSQETLVF LANPTEITKAIADYLQENEF 521 d1010937 2 out 1 101 6 9 6.20 21,88 MLLFVICFNFVLALGNVFLA GVLQIWQLASQGRWWANLVN 522 d1011015 2 out 1 476 9 1 9.87 39,418 MFGRLPLSVSTNMSNKNEIP LVQIKPSPSHVTGYDFFPIN 523 d1011142 2 out 1 148 9 9 14.43 102,133 MFSLKNYSPSPLLSAKAKEY AILAYWVARNIPFAPFSWLA 524 d1011162 2 out 1 829 0 0 0.59 49,587 MLQVLLVMAVLVFSALSLDF RRGRNQYVVWTEELEGESSL 525 d1011242 2 out 1 346 0 1 0.61 32,228 MTTKISRRTFFVGGTALTAL VSNLGRYQPDSARLMNEVGW 526 d1011352 2 out 1 275 9 2 11.57 48,90 METTLLLLCVTIGSALKNRI MTASLPKIYQKLLAEELDQA 527 d1011400 2 out 1 402 0 0 0.00 43,133 MSQNFFANLPKTRLLARLND WRTVASEGEGPETLQEALDQ 528 d1017322 2 out 1 202 0 2 0.14 64,87 MQPKQRAVPMSVATSPLTLS LLEECVLMPSRLEAIQKFTA 529 d1017736 2 out 1 188 1 7 1.86 51,179 MSIPLATGLIIYFFNHRYDG FIALLWWGHPWLMVMTSRVN 530 d1018007 2 out 1 183 9 2 12.50 39,61 MPLHFAALIPIDSLFSTQGI PLNFLVKDYDERVIELTEVK 531 d1018050 2 out 1 185 4 5 4.98 89,135 MFHGRMPHPGGFTSPGPGLL EIQCHPWRRNLYHLAFFAGK 532 d1018387 2 out 1 634 2 1 2.10 35,302 MKMKLIQPFIQSIRFRIVGL IGHIDGSIQFDDITMIAVYR 533 d1018817 2 out 1 399 2 1 2.00 229,332 MMLKVCVDATAIRGQLSGIG KDFSWENTARKTLEVYQSLI 534 d1019075 2 out 1 278 9 0 10.74 19,63 MQGLLLIFLIGTGLIFFLQN SAPNPPVAEENNGADEEEDW 535 d1019148 2 out 1 363 6 0 6.50 140,308 MTDNYKQNLARYSSDVVKKG RELGNHEKALEDLQKAQTII 536 d1019218 2 out 1 318 0 3 0.64 27,305 MPEYLLLPAGLISLSLAIAA FGVGLCRFGMFKAVRKNATQ 537 d1019231 2 out 1 412 0 0 0.00 111,211 MCTMTAVINSLSQPNVTSTS QGRALQRFLQTAPSVHYLTE 538 d1019239 2 out 1 426 0 2 0.50 190,216 MINPIKAVKGLWQLKIIKSE GYSSMSKYIIDDFVIYAEKQ 539 d1019317 2 out 1 305 0 0 0.67 40,278 MKILWYLMTRNSSKGFTLLE GTWTKTGNSYTSGGCTINAV 540 d1019470 2 out 1 106 9 5 12.27 37,71 MQKDLIAPMLFTGSLNTTGF ARMQATPDTSIDKFIQDHCI 541 d1019532 2 out 1 268 4 2 4.06 33,213 MEFFKLISEQSWISISITAS HLELIKENHWKLTSKGSFGD