Bottom - Previous - Next - CUBIC - PP home

Transmembrane helices for syny3 (Synechocystis PCC6803)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
416d10194852in57|ali|phd|phdHtm|8459-5.9137,71MSNPEGYNVWSDKPRWCQPW
417d10174202in17|ali|phd|phdHtm|66321-2.3946,218MGTSVSNPTAILQTMQGFLR
418d10183602in15|ali|phd|phdHtm|32893-13.5441,312MRNPDTLGLWTKTMVALRRF
419d10191712in13|ali|phd|phdHtm|39242-4.0263,217MLNPNLAEIELSQDDYQRYS
420d10174452in12|ali|phd|phdHtm|18897-11.8546,88MGGQTLAESSQVLRQEVLGA
421d10176692in11|ali|phd|phdHtm|13695-22.4028,54MASFLALLPRSLTTFLYAVA
422d10183012in11|ali|phd|phdHtm|10759-5.7269,105MCFPQGTYFGSLLRERFNDN
423d10185882in10|ali|phd|phdHtm|17976-7.46144,166MASSTQTNVTIAPKTLQQLR
424d10112452in9|ali|phd|phdHtm|80681-8.0936,215MVQEKPRFTRPLRYQLLAGC
425d10113592in9|ali|phd|phdHtm|45830-3.7535,202MQNNRLFNLSRWRLASYYAG
426d10193422in9|ali|phd|phdHtm|33165-6.48267,302MVTNSPSRSDISVYNGDRQG
427d10194422in9|ali|phd|phdHtm|27974-7.48210,258MVSGPVFQFSAPMTPDSLQQ
428d10114852in8|ali|phd|phdHtm|31865-6.37251,283MTIELSIVIPMYNEEDNLEH
429d10182422in8|ali|phd|phdHtm|49502-0.79390,485MDLLCTRPGCARLNSFPDLD
430d10183262in8|ali|phd|phdHtm|14599-9.1252,94MVKSARQGAGGFWRDFKDFI
431d10181182in7|ali|phd|phdHtm|45291-10.4973,328MSAQAVFPIAPHRADFFPRF
432d10176142in6|ali|phd|phdHtm|15891-13.5397,119MADPTNRDRLPFERKSKKKK
433d10186012in6|ali|phd|phdHtm|20185-8.4345,80MTNFPPLLREAKRDNRSIHF
434d10109302in5|ali|phd|phdHtm|17539-3.67111,170MKSVYPMSSPSSAVFADQGL
435d10178982in5|ali|phd|phdHtm|397220-2.00457,1855MSITLSDRLSAVVQDSAGTS
436d10182152in5|ali|phd|phdHtm|6599-14.0923,52MTPKSGILLLLSCVSAIAAV
437d10114282in3|ali|phd|phdHtm|27003-0.2621,49MKLAWFWLLILVGLLTACGV
438d10114812in3|ali|phd|phdHtm|30314-1.0432,87MSGFPPDLTSLLPFFHGALD
439d10115162in3|ali|phd|phdHtm|35694-12.7035,81MQDSNQRLKLGVLFFVVTLV
440d10188572in3|ali|phd|phdHtm|12143-4.8640,71MFFCCPLFPFVIPGKTTMRR
441d10194802in3|ali|phd|phdHtm|14990-9.4751,73MEFTFLLPLTIGLIVGYKAW
442d10195082in3|ali|phd|phdHtm|37152-5.00135,289MGLSKACVVFNGYLGKMTEP
443d10106772in2|ali|phd|phdHtm|16905-0.2128,89MSSFLVFSWRRWLQILILAI
444d10109712in2|ali|phd|phdHtm|15191-21.8628,56MATFLALLPRSLTTFLYAVA
445d10110102in2|ali|phd|phdHtm|44100-0.1032,181MFQATRRRLALWYTLVTAVL
446d10175852in2|ali|phd|phdHtm|13488-8.3371,104MLDFFCSGKGWWFQLGGNGN
447d10182172in2|ali|phd|phdHtm|31884-8.27258,290MSTSFSSAYRLAVLVPCRNE
448d10182792in2|ali|phd|phdHtm|7495-9.2645,67MNEPKQTETVQVVEKVSAIL
449d10187432in2|ali|phd|phdHtm|49162-6.0021,65MTSAYILVLSVLVLGGIIAA
450d10192472in2|ali|phd|phdHtm|24903-0.4491,127MGQFLPRPRPLESKKGLAKR
451d10107182in1|ali|phd|phdHtm|33870-7.67122,302MISNFGHIVKTYLSNFPKDD
452d10107512in1|ali|phd|phdHtm|45970-7.6334,200MSRFCPRFRLWGRLVPGVIL
453d10108492in1|ali|phd|phdHtm|18296-10.6453,130MYDDDQRRDRRLPLAPLERR
454d10109082in1|ali|phd|phdHtm|10739-3.8643,90MSEDSPKPEKKEPVPPTPLR
455d10110472in1|ali|phd|phdHtm|10192-12.7162,86MTPSDYQDQEVKTPKVEVVD
456d10110912in1|ali|phd|phdHtm|131930-3.73299,1293MSQQNYNWKRFWCPRSGNIS
457d10111482in1|ali|phd|phdHtm|18495-9.2131,53MLPKISLAAVGLTVGGILTI
458d10112132in1|ali|phd|phdHtm|31771-7.6230,297MVYHVRPKHALFLAFYCYFS
459d10112462in1|ali|phd|phdHtm|35001-0.2647,173MLAGIGALIRFANSLNISQT
460d10113022in1|ali|phd|phdHtm|51053-5.9537,207MMFRPLSRAIQVAMYYPIRI
461d10113102in1|ali|phd|phdHtm|49561-6.00121,269MITSMPRRPKSRRTQRRNLR
462d10113962in1|ali|phd|phdHtm|38093-14.32323,361MPNKPQFRQSNLVSHFNYFN
463d10114792in1|ali|phd|phdHtm|38713-1.30338,371MPQTQPGIEDFLLRQLRHPQ
464d10173732in1|ali|phd|phdHtm|8399-11.4629,69MKTLLLTWLDRILIADVFLV
465d10174092in1|ali|phd|phdHtm|13210-1.5548,110MASTPIQSEARTDLEPSFVI
466d10174772in1|ali|phd|phdHtm|38293-10.5033,262MGLDPPLPMLFKSRRNLVIL
467d10177192in1|ali|phd|phdHtm|29551-5.48143,182MSKPIFKLVDDLPTGGLTVM
468d10177822in1|ali|phd|phdHtm|45691-10.5730,196MLRPRTIKEGSVGLFALLGL
469d10178032in1|ali|phd|phdHtm|29892-9.4318,50MGAVISAIAALASWTVFITV
470d10178342in1|ali|phd|phdHtm|25452-5.1450,123MGNIFFPWVGTMDKYEGLES
471d10181052in1|ali|phd|phdHtm|36101-0.63284,330MPPLQLLRSLSALPDINPVV
472d10181642in1|ali|phd|phdHtm|12745-4.3846,68MNNFSPKFVTVNQSGLGCGL
473d10182072in1|ali|phd|phdHtm|41391-10.00314,336MNVLFLHQNFPGQFKHLAPA
474d10183512in1|ali|phd|phdHtm|8999-14.2153,80MDVLLDRLTTETLQWNVRLE
475d10183752in1|ali|phd|phdHtm|29592-10.00131,153MNSPFIPIALPSSFEHTYTD
476d10183902in1|ali|phd|phdHtm|33870-7.67122,302MISNFGHIVKTYLSNFPKDD
477d10183942in1|ali|phd|phdHtm|33361-6.6532,330MQSWRHRFLSYVLLACLSCT
478d10185192in1|ali|phd|phdHtm|46992-14.58424,446MTSLLTSSAQAPVANAPFPA
479d10185922in1|ali|phd|phdHtm|14097-11.2937,124MQLSFQERLESIKAGCLGAT
480d10186632in1|ali|phd|phdHtm|8539-3.3347,77MPFPQRFFPTFSFTPTPMFS
481d10188472in1|ali|phd|phdHtm|7588-8.8932,59MAMDKDTKFALLVMGIPLLG
482d10188882in1|ali|phd|phdHtm|33870-7.67122,302MISNFGHIVKTYLSNFPKDD
483d10189332in1|ali|phd|phdHtm|28313-1.3329,131MGFRRYQSLFAWILTVVLTA
484d10189652in1|ali|phd|phdHtm|24935-3.6740,241MEFHRQLPMTVAPHHPFNLS
485d10190522in1|ali|phd|phdHtm|17936-3.50121,163MDKLLKIAQLIDQFTAWIGK
486d10191052in1|ali|phd|phdHtm|33860-6.85122,302MISNFGHIVKTYLSNFPKDD
487d10191272in1|ali|phd|phdHtm|15297-16.6733,55MSPVYLWIVAGTILCLVEVI
488d10191802in1|ali|phd|phdHtm|33870-7.67122,302MISNFGHIVKTYLSNFPKDD
489d10193132in1|ali|phd|phdHtm|40692-14.2963,85MRKQRSKENWSPFSILINSR
490d10193752in1|ali|phd|phdHtm|63672-7.6932,55MAIANSRFRPWQVGILILPI
491d10193942in1|ali|phd|phdHtm|63311-1.4147,326MEPVTVGQKVLKPAVGLINQ
492d10194642in1|ali|phd|phdHtm|33870-7.67122,302MISNFGHIVKTYLSNFPKDD
493d10194772in1|ali|phd|phdHtm|23095-10.1753,78MLIPLTQETFDQVVPVIATG
494d10196002in1|ali|phd|phdHtm|12894-9.2670,92MSTENPIETKSPENNQSLDC
495d10174722out53|ali|phd|phdHtm|81999.4031,76MDSTVAAASVIAAALAVGLG
496d10180212out50|ali|phd|phdHtm|332444.8966,109MKIPGSVITLLIGVVITVVS
497d10188562out12|ali|phd|phdHtm|80292.4131,69MEDLLGLLLSETGLLAIIYL
498d10188412out11|ali|phd|phdHtm|165737.52105,145MKHLLALLLAFTLWFNFAPS
499d10195062out11|ali|phd|phdHtm|157383.3098,146MAESNQVVQAYNGDPFVGHL
500d10113792out9|ali|phd|phdHtm|79494.9444,69MRQFCAHFPLVCQKNLIIPT
501d10191742out9|ali|phd|phdHtm|243222.2567,234MTANSSPISVKALRALMRRG
502d10195882out9|ali|phd|phdHtm|491020.0038,348MAIATIFAQIWQYCKKPFLH
503d10175742out6|ali|phd|phdHtm|90797.6326,79MDLLLSTLVSFINIYLVLLF
504d10194042out6|ali|phd|phdHtm|128181.3675,121MTAIARERGRSKRGIALHRL
505d10107892out5|ali|phd|phdHtm|669916.2933,60MGDFLANVSRYPRYLISFTL
506d10110722out5|ali|phd|phdHtm|97999.3828,84MNYAAIVGQGLGILLAVMTV
507d10177612out5|ali|phd|phdHtm|869808.74386,470MATETNFSQLYGLAYAAYGQ
508d10174522out4|ali|phd|phdHtm|86595.9637,79MHSFLLATAVPATLSWSPKV
509d10175642out4|ali|phd|phdHtm|274494.54119,167MAEISDPGNGDWLDQAWQED
510d10182642out4|ali|phd|phdHtm|799911.8837,66MVGLGENNLPTKIGAKLTMD
511d10184692out4|ali|phd|phdHtm|1709723.6228,52MDVTIYLRWSAYATIASFIF
512d10193452out4|ali|phd|phdHtm|779910.6724,72MTLITVLRIIWMASAALLTV
513d10111432out3|ali|phd|phdHtm|849919.2332,79MTNQYVPNYLAQSILVTLFC
514d10114382out2|ali|phd|phdHtm|891101.33109,157MAEAFIAENTAVEDVSPNPN
515d10179812out2|ali|phd|phdHtm|145696.64103,130MVLGFGAGTKFNPQLTLSQN
num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
516d10186392out2|ali|phd|phdHtm|2629517.3332,54MFVFLSKLLPLFLYPLGLIS
517d10187182out2|ali|phd|phdHtm|74818.5620,57MLVLSVLSLALASFSAILCF
518d10108982out1|ali|phd|phdHtm|419525.8334,411MPLPLMMINYSLLLSLALPP
519d10109092out1|ali|phd|phdHtm|140797.3140,136MSSFNQITTIFSRKVQIGQL
520d10109152out1|ali|phd|phdHtm|267313.0098,196MEKYNIQVLGNVNSQETLVF
521d10109372out1|ali|phd|phdHtm|101696.2021,88MLLFVICFNFVLALGNVFLA
522d10110152out1|ali|phd|phdHtm|476919.8739,418MFGRLPLSVSTNMSNKNEIP
523d10111422out1|ali|phd|phdHtm|1489914.43102,133MFSLKNYSPSPLLSAKAKEY
524d10111622out1|ali|phd|phdHtm|829000.5949,587MLQVLLVMAVLVFSALSLDF
525d10112422out1|ali|phd|phdHtm|346010.6132,228MTTKISRRTFFVGGTALTAL
526d10113522out1|ali|phd|phdHtm|2759211.5748,90METTLLLLCVTIGSALKNRI
527d10114002out1|ali|phd|phdHtm|402000.0043,133MSQNFFANLPKTRLLARLND
528d10173222out1|ali|phd|phdHtm|202020.1464,87MQPKQRAVPMSVATSPLTLS
529d10177362out1|ali|phd|phdHtm|188171.8651,179MSIPLATGLIIYFFNHRYDG
530d10180072out1|ali|phd|phdHtm|1839212.5039,61MPLHFAALIPIDSLFSTQGI
531d10180502out1|ali|phd|phdHtm|185454.9889,135MFHGRMPHPGGFTSPGPGLL
532d10183872out1|ali|phd|phdHtm|634212.1035,302MKMKLIQPFIQSIRFRIVGL
533d10188172out1|ali|phd|phdHtm|399212.00229,332MMLKVCVDATAIRGQLSGIG
534d10190752out1|ali|phd|phdHtm|2789010.7419,63MQGLLLIFLIGTGLIFFLQN
535d10191482out1|ali|phd|phdHtm|363606.50140,308MTDNYKQNLARYSSDVVKKG
536d10192182out1|ali|phd|phdHtm|318030.6427,305MPEYLLLPAGLISLSLAIAA
537d10192312out1|ali|phd|phdHtm|412000.00111,211MCTMTAVINSLSQPNVTSTS
538d10192392out1|ali|phd|phdHtm|426020.50190,216MINPIKAVKGLWQLKIIKSE
539d10193172out1|ali|phd|phdHtm|305000.6740,278MKILWYLMTRNSSKGFTLLE
540d10194702out1|ali|phd|phdHtm|1069512.2737,71MQKDLIAPMLFTGSLNTTGF
541d10195322out1|ali|phd|phdHtm|268424.0633,213MEFFKLISEQSWISISITAS

Top - Previous - Next - CUBIC - PP home