--- -------------------------------------------------------------------------------- --- --- All proteins with at least 7 transmembrane helices in Rickettsia prowazekii --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 44 e1343057 9 in 2 297 9 0 -10.78 19,51,89,127,149,208,237,260,289 MSWIIFYTIIAALLILDLGI SLTVTISSLLFGIIASILEK 45 e1342419 9 in 1 888 1 0 -1.41 534,556,585,624,653,675,707,750,799 MKILKSLVLLVLFIVMPAKA FTNKFFSERNDITKKEEGAR 46 e1343095 9 in 1 326 1 1 -1.79 25,69,93,125,154,176,207,249,312 MNINSYSALFIFSFIATTIL PVISIMLAIAVITLTMHSLL 47 e1342522 9 out 5 453 9 2 13.31 39,74,115,146,205,236,342,375,426 MEFDQVLLSRIQFAFTISFH KGIEAIDNNETYVEHWLSNR 48 e1342883 9 out 5 361 3 0 3.97 43,103,152,186,223,256,296,318,356 MLYNLLLPHIHNSHIANLFH IRFWIISVIFSLIGLSSLKL 49 e1342388 9 out 3 465 7 0 7.92 25,51,73,104,144,193,220,258,322 MSLQIIQLLYLLAAVCFILS FMLFGDAKKVVDEIVKFLNE 50 e1342416 9 out 1 1124 0 0 0.81 23,80,347,377,498,527,549,574,720 MALFPRSILIALVLSFVLNL DELVKSGVVTEKRDNSSNEN 51 e1342573 9 out 1 348 9 2 12.86 37,59,81,113,181,235,267,298,339 MAVKTVLNFDLGNYLLNLIV IVIGLTVAAIMYLIYKVFNY 52 e1342662 9 out 1 405 1 2 1.21 32,78,107,145,193,237,288,343,392 MQYLILSLIFLIPSLGMLTG SGIWILVLMKLLVKPDIIID 53 e1342675 9 out 1 323 0 0 0.77 35,80,102,160,197,233,263,285,321 MNHGFTIKAINKHMNEIFCS IITFTTFFSVITISIIMYLM 54 e1342744 9 out 1 309 9 1 11.90 18,54,77,138,177,207,238,277,301 MIIFSIVFFKTVSVLLSVVI SLLFVVIYMPTMVSIFLSDL 55 e1342978 9 out 1 391 9 9 14.38 88,116,174,225,256,289,318,351,374 MQLLITVIFMEILAGSEIDL GLVTLHKLFKYDKIFEISEI 56 e1342523 8 in 4 339 9 3 -10.50 30,94,142,180,217,252,288,323 MLNFGSYIDLPLVCGGLIAT LGYTFYCYYIFRGKSSSQPL 57 e1342563 8 in 2 334 9 3 -12.78 27,108,138,172,211,273,302,325 MHQNLITRWLFISCIMVILM QFVAIILLSIIIWCYFLFKN 58 e1342418 8 in 1 971 1 0 -1.68 29,626,714,743,772,813,849,884 MQSNLLKVLGVLAIVATLVC EQNSKKYKKRIGENTNEETL 59 e1342880 8 in 1 248 0 0 -0.30 29,52,90,112,141,175,209,238 MIIAQNKTNYQDLLKTLAVI IQIIILQFIFIYKYTYGFKN 60 e1343067 8 out 68 339 9 3 9.41 32,101,131,173,207,260,295,332 MIEYFCEYMFPLTVIALKVV TLFGVVLVSSVLFYTDNLPS 61 e1342650 8 out 5 310 1 0 1.18 56,78,129,170,193,237,262,299 MSSLVTQINFNKINNSQSTV FIFILLSSTSTIHSLRDIIF 62 e1342694 8 out 1 282 6 2 6.70 28,53,89,143,172,208,242,265 MFKIALVVFRECLEISLLLS IQIKLRYYKNNLISVQTNES 63 e1342500 7 in 57 278 7 3 -7.49 40,63,111,160,193,233,273 MNPNSNSITKSHLFHIVNPS YWHFVDVVWLFLFTFVYILG 64 e1342908 7 in 3 253 0 5 -0.73 22,62,98,138,184,224,246 MTLIILALILISCIFAPLGC TPLFIILGTLIYSVLYLKRF 65 e1342458 7 in 2 236 3 5 -3.26 47,79,105,128,167,189,227 MIDYTKTLTTTSKNKTFDEG LYLDFINLFLYLMRFLGNRR 66 e1342671 7 in 1 280 1 1 -1.44 23,66,101,148,191,221,268 MNILITALEQSLIMLPLILG LKLILGIVLFISLSSVKRED 67 e1342360 7 out 8 268 9 2 20.09 43,82,122,146,199,228,261 MLNELNNLFMILPNINPIIF QILSAPMLLLGSYLICRSNP 68 e1342669 7 out 2 496 8 2 8.35 34,74,100,132,174,199,491 MYKTKIICLLLGILSGLVFA MLLSIVFIILIHYLLSLIFD 69 e1342915 7 out 2 351 9 3 9.41 34,80,163,236,265,287,333 MNRTAVFWLVFLTLFISGFM KILLLNLIKFYKSSKFYRTD 70 e1342320 7 out 1 258 2 3 2.02 53,84,128,158,193,220,245 MIKYFFSKKYWRAIALLVKA ITVFISYLIYRQFSKRVIYY 71 e1343140 7 out 1 360 1 2 1.60 38,68,90,118,296,329,353 MLLYRKYFIKNILPLLIIVT CYFNLLVALTIGLYLLVHKR