--- -------------------------------------------------------------------------------- --- --- All proteins with at least 3 transmembrane helices in Rickettsia prowazekii --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 121 e1342520 3 in 165 548 1 2 -1.08 48,138,236 MDSILLQKIIDLIESFSDEN LLKNSKLYKKLWDSQIKGSI 122 e1342438 3 in 12 124 8 9 -8.46 53,85,124 MTKIKQEIYNKRPTSPHLTI VNITGWCVVVCSILLTMLLW 123 e1343123 3 in 5 212 4 3 -4.07 127,161,208 MFEKYIMYLKNLIFFQFIVY NHAPNLIYTKLILYIRELSS 124 e1342713 3 in 3 385 0 1 -0.10 76,113,306 MKKIILVAGGTGGHFFPAVA LNRKKEGHVLLSNLIEDTVF 125 e1342411 3 in 2 83 9 6 -9.17 18,60,82 MFKHVLLSIIIFLGINQNVY ACAYFTYKYIIPIFIASLNA 126 e1342439 3 in 2 125 8 9 -8.47 47,82,119 MIYDFKAEIIKAKNSSFSKS IVKLFCILTIVSFVVAIFYS 127 e1343007 3 in 2 244 8 3 -8.91 21,189,219 MKINFLILTTFIILTSLGFW NIPVPVNKQLKSLEQKNNQK 128 e1343136 3 in 2 231 9 5 -22.37 26,57,86 MNKRLIKLIFIVCSTVIVTG MSLLERFKGFRIDKDLLILN 129 e1342356 3 in 1 430 5 2 -5.02 41,279,402 MLYEKFEYNINNLIGNFGLS DVWNFEVSFAPNFVSRFTHF 130 e1342403 3 in 1 218 0 3 -0.32 32,73,194 MRKALKKFLKNSKCLLSIIT KVKNHLNLEKQLKSLTESLK 131 e1342501 3 in 1 128 3 7 -3.74 45,86,112 MLIFLEVKYMNFHNRKLDEE KAPDIVNMVSSDNNSSSCGV 132 e1342738 3 in 1 173 4 8 -4.12 44,109,153 MKKQIIYPDFITRIFSTALD LFSSKKQALHDRIAGTVVIK 133 e1342858 3 in 1 173 0 4 -0.54 37,127,160 MLKIKQEIYKNSLQVILKFF SYNIIRLILDSPMDYFKKYA 134 e1342661 3 out 66 123 8 9 8.12 32,82,112 MLQNSELLQEYLPIAIFFGI FFLFVLIIGFIYEWTKGALD 135 e1343062 3 out 42 110 8 9 8.33 35,59,90 MLKILNMNEYISLNHYLILS LLIYFRNKGSIKITDINKMR 136 e1342614 3 out 18 241 9 6 13.21 50,166,207 MSADTNINDRLEIVMQDNLS IEDFISELNSILSKAIDQEK 137 e1343131 3 out 4 132 6 9 6.81 61,91,119 MNQLPIMAKQAAEIASNAQE ASINIFGGFIVTTRMLEMFK 138 e1342590 3 out 2 146 3 7 3.28 57,79,127 MKDLIRILNKFSIKYVELDC LIYQIYKHYGTVSENEVNVD 139 e1342402 3 out 1 461 6 0 6.22 23,111,134 MMLLYYTLSFILLPVYFIII VENNQKKILDEYLQIIKQFL 140 e1342547 3 out 1 231 0 1 0.30 33,55,109 MKQYNDLFKIIHREGYIFIA GETIIADFGRKKTEEFKFER 141 e1342670 3 out 1 303 3 1 3.07 24,112,212 MFISNIFQKFFSFLFVLLIT LKQDILTQENLSVLPFKHKE 142 e1342844 3 out 1 186 3 5 3.75 54,142,167 MPMIEDIMKLAKFSYDDLDY KLNNSIAPLYIRQPDAKRTI 143 e1342998 3 out 1 148 9 6 10.13 45,68,133 MLKSLIYELLKSSIKQEEHY TFIICTYIKRKFLKNFMYYT 144 e1343040 3 out 1 304 4 2 4.57 43,66,274 MAILANRVKNSSNSLELIRI LKCCTLHNYCKNVSLFHGTF