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Transmembrane helices for ricpr (Rickettsia prowazekii)
Jinfeng Liu & Burkhard Rost
CUBIC Columbia Univ, Dept Biochem & Mol Biophysics
| num | id | nhtm | top | nali | ali|phd|phdHtm | len1 | riTop | riMod | topD | htmCN | seqN |
| 121 | e1342520 | 3 | in | 165 | |ali|phd|phdHtm| | 548 | 1 | 2 | -1.08 | 48,138,236 | MDSILLQKIIDLIESFSDEN |
| 122 | e1342438 | 3 | in | 12 | |ali|phd|phdHtm| | 124 | 8 | 9 | -8.46 | 53,85,124 | MTKIKQEIYNKRPTSPHLTI |
| 123 | e1343123 | 3 | in | 5 | |ali|phd|phdHtm| | 212 | 4 | 3 | -4.07 | 127,161,208 | MFEKYIMYLKNLIFFQFIVY |
| 124 | e1342713 | 3 | in | 3 | |ali|phd|phdHtm| | 385 | 0 | 1 | -0.10 | 76,113,306 | MKKIILVAGGTGGHFFPAVA |
| 125 | e1342411 | 3 | in | 2 | |ali|phd|phdHtm| | 83 | 9 | 6 | -9.17 | 18,60,82 | MFKHVLLSIIIFLGINQNVY |
| 126 | e1342439 | 3 | in | 2 | |ali|phd|phdHtm| | 125 | 8 | 9 | -8.47 | 47,82,119 | MIYDFKAEIIKAKNSSFSKS |
| 127 | e1343007 | 3 | in | 2 | |ali|phd|phdHtm| | 244 | 8 | 3 | -8.91 | 21,189,219 | MKINFLILTTFIILTSLGFW |
| 128 | e1343136 | 3 | in | 2 | |ali|phd|phdHtm| | 231 | 9 | 5 | -22.37 | 26,57,86 | MNKRLIKLIFIVCSTVIVTG |
| 129 | e1342356 | 3 | in | 1 | |ali|phd|phdHtm| | 430 | 5 | 2 | -5.02 | 41,279,402 | MLYEKFEYNINNLIGNFGLS |
| 130 | e1342403 | 3 | in | 1 | |ali|phd|phdHtm| | 218 | 0 | 3 | -0.32 | 32,73,194 | MRKALKKFLKNSKCLLSIIT |
| 131 | e1342501 | 3 | in | 1 | |ali|phd|phdHtm| | 128 | 3 | 7 | -3.74 | 45,86,112 | MLIFLEVKYMNFHNRKLDEE |
| 132 | e1342738 | 3 | in | 1 | |ali|phd|phdHtm| | 173 | 4 | 8 | -4.12 | 44,109,153 | MKKQIIYPDFITRIFSTALD |
| 133 | e1342858 | 3 | in | 1 | |ali|phd|phdHtm| | 173 | 0 | 4 | -0.54 | 37,127,160 | MLKIKQEIYKNSLQVILKFF |
| 134 | e1342661 | 3 | out | 66 | |ali|phd|phdHtm| | 123 | 8 | 9 | 8.12 | 32,82,112 | MLQNSELLQEYLPIAIFFGI |
| 135 | e1343062 | 3 | out | 42 | |ali|phd|phdHtm| | 110 | 8 | 9 | 8.33 | 35,59,90 | MLKILNMNEYISLNHYLILS |
| 136 | e1342614 | 3 | out | 18 | |ali|phd|phdHtm| | 241 | 9 | 6 | 13.21 | 50,166,207 | MSADTNINDRLEIVMQDNLS |
| 137 | e1343131 | 3 | out | 4 | |ali|phd|phdHtm| | 132 | 6 | 9 | 6.81 | 61,91,119 | MNQLPIMAKQAAEIASNAQE |
| 138 | e1342590 | 3 | out | 2 | |ali|phd|phdHtm| | 146 | 3 | 7 | 3.28 | 57,79,127 | MKDLIRILNKFSIKYVELDC |
| 139 | e1342402 | 3 | out | 1 | |ali|phd|phdHtm| | 461 | 6 | 0 | 6.22 | 23,111,134 | MMLLYYTLSFILLPVYFIII |
| 140 | e1342547 | 3 | out | 1 | |ali|phd|phdHtm| | 231 | 0 | 1 | 0.30 | 33,55,109 | MKQYNDLFKIIHREGYIFIA |
| 141 | e1342670 | 3 | out | 1 | |ali|phd|phdHtm| | 303 | 3 | 1 | 3.07 | 24,112,212 | MFISNIFQKFFSFLFVLLIT |
| 142 | e1342844 | 3 | out | 1 | |ali|phd|phdHtm| | 186 | 3 | 5 | 3.75 | 54,142,167 | MPMIEDIMKLAKFSYDDLDY |
| 143 | e1342998 | 3 | out | 1 | |ali|phd|phdHtm| | 148 | 9 | 6 | 10.13 | 45,68,133 | MLKSLIYELLKSSIKQEEHY |
| 144 | e1343040 | 3 | out | 1 | |ali|phd|phdHtm| | 304 | 4 | 2 | 4.57 | 43,66,274 | MAILANRVKNSSNSLELIRI |
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