--- -------------------------------------------------------------------------------- --- --- All proteins with at least 2 transmembrane helices in Rickettsia prowazekii --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 145 e1343113 2 in 26 436 3 0 -3.89 265,396 MTNGNNNNLEFAELKIRGKL RPRQLYTGYVHREYKCIVER 146 e1342392 2 in 5 100 2 9 -2.62 22,71 MIDIFLFVHITISILLIIVI LVSKINEIEENQADNSLPIA 147 e1342549 2 in 4 350 8 0 -8.28 36,253 MFSVLQQVIYKYKHYSFIKH PNANLVPGMSARVSIRTDQS 148 e1342622 2 in 3 116 4 9 -4.74 52,78 MNIYAIYINSTQKNNNFIIL IIIANSRIEAELKFLERSIL 149 e1342330 2 in 1 387 0 2 -0.50 73,237 MQIIHKTLKISSKEYKKILS LKNFWIEHDFKPSKSELLEK 150 e1342338 2 in 1 82 9 9 -12.50 54,76 MNTEKLKDIKARIKDFKSYK LFLIIFTIIGMIAGFNIIRR 151 e1342479 2 in 1 90 9 5 -10.46 39,68 MIILHLIHRSLNMLINTSNN GVYSFLYLGKIFCKPGIKNV 152 e1342495 2 in 1 315 8 2 -8.22 31,98 MILQEVKMKKLPILLKLVFI KAGDIIWAVNDQETWRQFSI 153 e1342502 2 in 1 207 0 5 -0.57 103,195 MYITCPNCKTQFIVTSNQIG IPVTAKYIDITICNRLGLLF 154 e1342505 2 in 1 313 9 4 -11.70 26,211 MNNLKLVTIISIFFICSNIY HYFADTKNFVLPKHHSVRNK 155 e1342558 2 in 1 163 9 7 -12.73 27,74 MFMINNYLNEIWLIIGIICI GVKGNILICSKHRFNNNADY 156 e1342565 2 in 1 414 5 2 -5.79 36,374 MKIFLYYRTFVNCVLIGLEF LNQLGIIYFRDAIIGAAIKK 157 e1342572 2 in 1 106 9 9 -13.89 25,85 MTLYYIGILVVIIGLFSIFS KASLLMKIRTYNTVLLKKIR 158 e1342594 2 in 1 243 3 2 -3.08 75,153 MNNIFGFFKSSNNTQSASGG ELDINPVGFQVNGYRVDDDN 159 e1342601 2 in 1 274 1 0 -1.50 183,206 MKRINKVLLSLLCLVIAYAG STFLNTGQWLEDDTAAKMLN 160 e1342653 2 in 1 868 3 0 -3.62 25,322 MIKKIVVGIIICFTLLFIIF PKKTFDSSKLKTILIPQTTY 161 e1342768 2 in 1 243 9 5 -16.67 33,55 MMLWRLRILSFYGLLSLFTF RILNEKVEQIINSEKQKLLN 162 e1342916 2 in 1 221 0 2 -0.73 171,206 MQQYIFHFTPSNKYHPDEFI SKRKITISLVKEVLNNYKNK 163 e1342971 2 in 1 426 9 0 -11.00 23,319 MPSLLLLTTTILLILCVLII IVSSKSEIIEVDAENPTQIE 164 e1343051 2 in 1 835 9 1 -13.00 26,819 MNFIKKTFVSIFIILIALSF IPVVGKIFSKVALYSLKMHY 165 e1343069 2 in 1 118 4 8 -4.28 40,92 MDKHLKEYTESGKKNLIVVY IGFKYMIEDQAYPNPITYWI 166 e1343193 2 in 1 554 6 0 -6.67 27,443 MKKILIIILFIIIFIVLIYS LIPSINQKILEECVLSDIVT 167 e1342336 2 out 37 74 7 9 7.43 30,70 MDIVSLKFIGIGFMAIGMYG AGLAEAMGLFSFVIAMLLIF 168 e1342734 2 out 15 386 0 0 0.45 276,332 MNIHEYQAKEILRKYGVPTS LKIIPAHDLADAANKIVEAI 169 e1342691 2 out 3 320 2 2 2.53 46,111 MIIMRNYKFKLEPLKQCQEA QCSINCHIKLVNLKYKLAVN 170 e1342732 2 out 2 266 9 0 9.48 23,250 MKHIIGKILVIFVVIIGVLF GLIDLPQLLNIVQEIMDNKI 171 e1342763 2 out 2 276 1 1 1.48 65,267 MRCSSYCTSSEYKMSDLVTN GLEVILSLSHTNLFLKIIGA 172 e1342329 2 out 1 299 8 3 8.67 45,67 MKTNMLTNNCKDKIFIKKSH NSNTFQDQYLQMINQVKKCI 173 e1342592 2 out 1 247 2 0 2.70 75,120 MIELKHNKLDYNLVIMDQLT MTFNFTVTSYKLKLLRNKNQ 174 e1342593 2 out 1 59 1 9 1.67 19,47 MLKSLKFLLVFIILAQLLSC DNSSLSINPCIRRPINAVNI 175 e1342596 2 out 1 483 3 1 3.44 54,373 MAVDQNNNNNTDSLSGADLP IYVNKDYKFPKTVLLKSKVM 176 e1342600 2 out 1 298 2 1 2.00 98,218 MFRKFLFIQLLIVTSLVKAE RNNPPLKNNNAKSKNSYETY 177 e1342645 2 out 1 341 9 1 9.10 23,257 MIPIQIIIYMPAKLIILITL LVVIEGMTKIDDGSKVKIFD 178 e1342735 2 out 1 212 3 2 3.37 23,174 MSPQIIELLIFAIIAFYIIN TFTRNANTKEVDWFLSNIER 179 e1342745 2 out 1 293 9 4 22.00 125,149 MKINSIKIGPYINLLPLQYI LMNDEEINYIESWLEKSIDV 180 e1342843 2 out 1 90 9 9 10.66 49,86 MISSIIGIKFSACIEGCNAS SMFTSFLFVLYKVLRLITIS 181 e1342994 2 out 1 290 0 4 0.00 29,51 MKKFLKKLRYLIEYFIVIIF LGEWVKQNPAQWFWFHNRWK