--- -------------------------------------------------------------------------------- --- --- All proteins with at least 10 transmembrane helices in Pyrococcus horikoshii --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 1 d1030378 17 out 3 626 0 0 0.03 39,61,101,126,181,227,249,279,342,364,390,414,458,516,547,594,621 MEFKPYVPPEKSLPEYTVKA NILGVLFLLALLGWLTKLGR 2 d1031502 15 out 7 495 7 0 7.46 22,52,96,136,158,183,222,264,293,324,346,394,425,469,491 MSQVASLLIALPLISAFFVP GSDIFAVKVYINNVPLLGVV 3 d1030981 14 out 8 481 1 1 1.18 25,60,98,136,176,213,246,272,310,332,367,394,442,481 MNAIVMVLGPVIFSILVYIF IKVNLNESAALFALILGVVS 4 d1031205 13 in 7 443 8 1 -8.76 41,74,103,126,152,197,219,264,314,346,368,408,440 MGWAERYFELDKYGTDVKTE PLMYILALIFVGYFAYLAGV 5 d1031501 13 in 3 617 5 1 -5.50 46,87,129,167,218,259,295,342,399,428,475,519,617 MNELLLITFSPLVAGVLAWL NVQAYAWYLAIILLILAAMG 6 d1031875 13 in 3 496 5 0 -5.44 43,65,111,168,215,237,265,305,327,359,432,454,485 MARDMPKLRRFINVSEDIFV EIFPTIVFIVGVLMMLPRRG 7 d1030257 13 in 1 976 9 0 -10.97 45,109,134,188,214,236,270,292,327,388,432,472,690 MVKSKVKKVEKGKEGEEKRS IVEKEYTMIEVSASAPHHSS 8 d1030460 13 in 1 589 1 0 -1.95 37,68,98,162,186,213,238,273,316,372,404,436,458 MVNLIVAQSCRDSNWSKIQI RVEWNKIYSSNALNVFRKIY 9 d1030807 13 in 1 397 7 0 -7.47 28,62,90,119,146,177,220,259,291,315,337,359,385 MGRWRAVILDTILMTAGFGT LVGILTLIIVSRMKLPIEVK 10 d1030674 13 out 5 406 1 0 1.84 24,59,102,132,160,198,226,262,284,309,349,372,401 MIPIDPWIILTLILGFGMAW VTVPVAGIIAGIIFKVLLLI 11 d1031085 13 out 1 491 8 1 8.62 33,66,101,148,186,214,259,304,343,395,417,445,472 MEHISWNLEVGSLSSALIIV VAYLTKPEEELFTRFKEAVS 12 d1031401 12 in 10 559 9 1 -9.95 60,104,140,172,233,279,328,385,421,446,500,551 MRLTRPELQSLSFQLQGLEK ILMAISMLSFLLIERIGEEV 13 d1031410 12 in 5 537 8 0 -8.31 23,87,142,177,204,253,296,339,390,417,444,486 MNLGILLGFLIYLVLLAYIG VARAKSQAENVFDFAIASGL 14 d1030973 12 in 3 390 0 1 -0.42 21,46,70,95,124,166,195,235,292,317,349,379 MSYIFDLSILLVVAKSLEWL VSMLTALSTPVLFRYTVRKL 15 d1031421 12 in 3 521 0 1 -0.50 61,123,174,203,256,297,340,365,402,430,471,500 MDMEQRERWATKIGLILAMA YYAIKKKYGEELEKNEVIIK 16 d1030148 12 in 2 375 6 2 -6.89 20,43,66,102,125,160,194,236,277,306,342,366 METLLLLAILLAVAKFSGWI TMVFLTTLVTPLLLKRIYQI 17 d1030248 12 in 2 387 9 0 -9.85 26,52,100,122,155,181,225,252,288,314,346,376 MLRDLWFLNFSTLFFFLGIS LPLLSLLIVNIPVIWRDKNE 18 d1030607 12 in 2 472 8 2 -8.96 55,92,137,172,210,233,283,312,361,395,434,461 MVLKGELDEEDSGMSIEKAK LAAIVGLAWFLKGSWMRKII 19 d1031869 12 in 2 463 9 1 -10.45 37,67,106,144,180,213,238,285,333,371,418,451 MSELRRRLWELAWPAIMGNI FITAGLFWIVFRRGKWKTIK 20 d1030450 12 in 1 432 4 1 -4.14 31,56,98,132,172,194,234,271,316,347,389,411 MNTVQRIAKNMAVLFLARIV RLKWFDKEDIEIFKTVLGLR 21 d1030609 12 in 1 449 6 1 -6.08 40,76,120,159,197,219,269,296,341,384,406,437 MANIEKAREEILSGSIEKTL IAALVGFLWFLKGSWMRRIV 22 d1030737 12 in 1 397 4 0 -4.45 44,67,89,129,152,199,221,248,272,324,355,395 MMRMNLKIKLEKFINSELVR ITTLSDIFSTLFIVLLAHLI 23 d1030822 12 in 1 669 7 0 -7.70 24,71,93,144,172,215,260,282,304,354,391,420 MKRRTIFILLGVLGVYIILR GNMSRISDTLIKVRGELEIT 24 d1031045 12 in 1 432 0 2 -0.02 31,64,105,127,159,206,244,294,322,350,374,416 MSMNRKRVIVRHSIASVIAL IAYLIIEWRKIRLFLHDIRS 25 d1031088 12 in 1 527 5 0 -5.26 34,58,98,125,194,238,297,340,411,454,484,521 MEKVRKHPSAFEPGVFVLNV GLIAGSTLVSFFTSTLKLGK 26 d1031202 12 in 1 422 0 2 -0.67 39,63,109,137,168,203,241,271,314,336,378,411 MQDIKPVKERIFDFWSNFSI LITLVLYYILSLGGSKNEVH 27 d1031649 12 in 1 425 4 0 -4.83 23,45,82,115,143,177,204,247,287,316,362,393 MEATWILFTIGTAIIIAKIG AQKMAKLESRKERIERKKKA 28 d1030318 12 out 4 380 6 2 6.04 22,46,71,100,127,165,202,241,282,310,344,371 MNVLLELAIILVVAKLFGYL TMVVVTTLVTPFLLKLAFSR 29 d1030025 12 out 1 395 8 0 8.36 24,68,123,168,190,238,260,282,315,337,360,394 MGITLLLISFAVVIVLIWLK KMLLPSLVFFIVGLMYIVSI 30 d1030302 12 out 1 787 4 0 4.15 22,68,270,293,315,371,396,454,659,688,741,771 MFAKVSMIIFLASLIPIFVH YLVTPAILQLEFGRKIKEVK 31 d1031099 12 out 1 395 0 0 0.54 28,53,94,128,175,211,242,267,304,345,367,395 MRGGYRAWFIVNRFFGFIIL FRAIEGALAGFWLGVLLSML 32 d1031481 11 in 46 510 2 2 -2.12 51,97,141,191,225,265,298,360,404,439,481 MTWLPFIIIIPLFGAFSMPI IPAARNLWDITSYVMTLMGG 33 d1031980 11 in 5 424 1 2 -1.25 26,48,72,112,152,192,251,294,337,379,416 MISEVEIITLGIFIATYAVI VMISSVAAGSLVLIARYGGG 34 d1031185 11 in 2 453 9 0 -9.12 27,93,116,144,167,208,239,278,300,326,348 MREIRIPKALTLLFIVYMVV SKYYAPIIRDLNKAIFLCSN 35 d1030701 11 in 1 413 9 0 -13.57 57,79,122,151,174,196,261,298,332,354,400 MTLMKTRKNTILQGIRERAG SVMLYSTTLPLIVSFLLAFK 36 d1031274 11 in 1 483 9 0 -10.12 64,93,133,165,202,254,320,348,402,424,464 MLWEIIRVTYRELHYRMIKE PISYIVVDSMIIIGSLILWG 37 d1031329 11 out 2 400 3 1 3.22 37,62,119,156,179,203,259,298,329,355,395 MGFEQALIDFFEHMGLLNLT PNVAGVIGTAVVAGVFLSAL 38 d1030931 11 out 1 381 5 1 5.06 49,99,121,151,173,218,246,287,309,343,366 MNKTKKLLKFEFLAQGSLGA TGVFIAEALINPLKERFELL 39 d1031954 11 out 1 533 6 0 6.32 35,82,125,173,212,278,319,355,397,419,502 MSDFGILSLLPPLVAIVLAI YGKKYGVPHGRVPIYPTEIS 40 d1031342 10 in 23 425 4 2 -4.89 30,69,105,163,214,253,275,329,358,387 MGLYRKYIEYPVLQKILIGL DLTGTAIVAKTEGELEKGVI 41 d1030625 10 in 3 284 9 1 -11.74 33,56,89,111,135,162,192,220,249,272 MKLMDETRKAELILLGLSAI GAFLILVAIWLEISREKLIK 42 d1030921 10 in 3 330 3 3 -3.40 34,60,97,126,160,194,228,261,291,320 MRMGVKDFAPSWFASVMGTG WFLLALWLVTGIKTLVHDFS 43 d1031317 10 in 3 758 6 0 -6.13 24,81,108,205,245,300,326,375,412,453 MKRRYSILIILLVAIFYRMI RYVLKRGKKVVDRGVFRLSY 44 d1030102 10 in 1 462 3 0 -3.38 28,96,121,148,193,223,271,299,323,351 MKIKGTEKVPILIFLGALAI LVKEFHGGRFKVYINRRSLA 45 d1030149 10 in 1 378 8 1 -8.61 29,66,112,136,168,208,245,288,336,361 MSNGHRYGIFYRWLLPAIIF ITVGVARILNPNWMKEFWER 46 d1030384 10 in 1 457 8 1 -8.13 35,79,127,178,255,288,325,352,398,428 MHSKQSTNIGGMKMGNFRRK RDKVKEILKMRAEEILKLKF 47 d1030729 10 in 1 388 9 1 -10.50 40,66,107,162,189,251,308,330,359,382 MIFMRWNEIPREAKAYMLYH YAASLVAFILAGVFLLWIAK 48 d1031305 10 in 1 372 9 1 -10.25 22,60,101,123,157,179,217,287,338,362 MQKLIILILISLGWIFNYSH LAYLVSALIIIVDIRKTSYK 49 d1030043 10 out 9 370 9 2 9.87 19,57,104,150,184,216,252,293,322,357 MLKLILVGILVGLIVGAYKV PGLLLSSLISYLITIKTLKT 50 d1031174 10 out 5 318 7 2 7.43 22,54,93,120,148,183,220,257,279,309 MDISLVLLSIAFYIAWNIGA VIGITLSYAVAKLFVFFNLL 51 d1030504 10 out 2 325 9 2 9.11 33,63,105,132,154,194,222,261,291,318 MSGISSLGGRVGVTILEILI LLIIYSAFIYLLTQGKVYIP 52 d1030852 10 out 2 368 1 2 1.29 33,57,109,141,178,230,259,298,329,365 MDYEGIRDFVKKEWFLFTLI PYFLLTLILSIFILHLSISG 53 d1031786 10 out 2 292 9 3 15.12 28,53,89,120,142,175,198,240,269,291 MEVYSMNFALGVILAFSAAF SKLVASMMLSFIGILIIGVL 54 d1030408 10 out 1 408 4 2 4.88 34,64,108,137,183,233,271,320,345,398 MSESLKLKLIKNAAWLFGAE ATATIISQGIATVLSVLEVN 55 d1030752 10 out 1 398 2 1 2.89 43,74,106,168,196,239,271,315,358,387 MIKMEKERKIAGISWNVFLL ASVMNFIAMILMGTFVKEKA