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Transmembrane helices for pyrho (Pyrococcus horikoshii)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
1d103037817out3|ali|phd|phdHtm|626000.0339,61,101,126,181,227,249,279,342,364, 390,414,458,516,547,594,621 MEFKPYVPPEKSLPEYTVKA
2d103150215out7|ali|phd|phdHtm|495707.4622,52,96,136,158,183,222,264,293,324, 346,394,425,469,491 MSQVASLLIALPLISAFFVP
3d103098114out8|ali|phd|phdHtm|481111.1825,60,98,136,176,213,246,272,310,332, 367,394,442,481 MNAIVMVLGPVIFSILVYIF
4d103120513in7|ali|phd|phdHtm|44381-8.7641,74,103,126,152,197,219,264,314,346, 368,408,440 MGWAERYFELDKYGTDVKTE
5d103150113in3|ali|phd|phdHtm|61751-5.5046,87,129,167,218,259,295,342,399,428, 475,519,617 MNELLLITFSPLVAGVLAWL
6d103187513in3|ali|phd|phdHtm|49650-5.4443,65,111,168,215,237,265,305,327,359, 432,454,485 MARDMPKLRRFINVSEDIFV
7d103025713in1|ali|phd|phdHtm|97690-10.9745,109,134,188,214,236,270,292,327,388, 432,472,690 MVKSKVKKVEKGKEGEEKRS
8d103046013in1|ali|phd|phdHtm|58910-1.9537,68,98,162,186,213,238,273,316,372, 404,436,458 MVNLIVAQSCRDSNWSKIQI
9d103080713in1|ali|phd|phdHtm|39770-7.4728,62,90,119,146,177,220,259,291,315, 337,359,385 MGRWRAVILDTILMTAGFGT
10d103067413out5|ali|phd|phdHtm|406101.8424,59,102,132,160,198,226,262,284,309, 349,372,401 MIPIDPWIILTLILGFGMAW
11d103108513out1|ali|phd|phdHtm|491818.6233,66,101,148,186,214,259,304,343,395, 417,445,472 MEHISWNLEVGSLSSALIIV
12d103140112in10|ali|phd|phdHtm|55991-9.9560,104,140,172,233,279,328,385,421,446, 500,551 MRLTRPELQSLSFQLQGLEK
13d103141012in5|ali|phd|phdHtm|53780-8.3123,87,142,177,204,253,296,339,390,417, 444,486 MNLGILLGFLIYLVLLAYIG
14d103097312in3|ali|phd|phdHtm|39001-0.4221,46,70,95,124,166,195,235,292,317, 349,379 MSYIFDLSILLVVAKSLEWL
15d103142112in3|ali|phd|phdHtm|52101-0.5061,123,174,203,256,297,340,365,402,430, 471,500 MDMEQRERWATKIGLILAMA
16d103014812in2|ali|phd|phdHtm|37562-6.8920,43,66,102,125,160,194,236,277,306, 342,366 METLLLLAILLAVAKFSGWI
17d103024812in2|ali|phd|phdHtm|38790-9.8526,52,100,122,155,181,225,252,288,314, 346,376 MLRDLWFLNFSTLFFFLGIS
18d103060712in2|ali|phd|phdHtm|47282-8.9655,92,137,172,210,233,283,312,361,395, 434,461 MVLKGELDEEDSGMSIEKAK
19d103186912in2|ali|phd|phdHtm|46391-10.4537,67,106,144,180,213,238,285,333,371, 418,451 MSELRRRLWELAWPAIMGNI
20d103045012in1|ali|phd|phdHtm|43241-4.1431,56,98,132,172,194,234,271,316,347, 389,411 MNTVQRIAKNMAVLFLARIV
21d103060912in1|ali|phd|phdHtm|44961-6.0840,76,120,159,197,219,269,296,341,384, 406,437 MANIEKAREEILSGSIEKTL
22d103073712in1|ali|phd|phdHtm|39740-4.4544,67,89,129,152,199,221,248,272,324, 355,395 MMRMNLKIKLEKFINSELVR
23d103082212in1|ali|phd|phdHtm|66970-7.7024,71,93,144,172,215,260,282,304,354, 391,420 MKRRTIFILLGVLGVYIILR
24d103104512in1|ali|phd|phdHtm|43202-0.0231,64,105,127,159,206,244,294,322,350, 374,416 MSMNRKRVIVRHSIASVIAL
25d103108812in1|ali|phd|phdHtm|52750-5.2634,58,98,125,194,238,297,340,411,454, 484,521 MEKVRKHPSAFEPGVFVLNV
26d103120212in1|ali|phd|phdHtm|42202-0.6739,63,109,137,168,203,241,271,314,336, 378,411 MQDIKPVKERIFDFWSNFSI
27d103164912in1|ali|phd|phdHtm|42540-4.8323,45,82,115,143,177,204,247,287,316, 362,393 MEATWILFTIGTAIIIAKIG
28d103031812out4|ali|phd|phdHtm|380626.0422,46,71,100,127,165,202,241,282,310, 344,371 MNVLLELAIILVVAKLFGYL
29d103002512out1|ali|phd|phdHtm|395808.3624,68,123,168,190,238,260,282,315,337, 360,394 MGITLLLISFAVVIVLIWLK
30d103030212out1|ali|phd|phdHtm|787404.1522,68,270,293,315,371,396,454,659,688, 741,771 MFAKVSMIIFLASLIPIFVH
31d103109912out1|ali|phd|phdHtm|395000.5428,53,94,128,175,211,242,267,304,345, 367,395 MRGGYRAWFIVNRFFGFIIL
32d103148111in46|ali|phd|phdHtm|51022-2.1251,97,141,191,225,265,298,360,404,439, 481 MTWLPFIIIIPLFGAFSMPI
33d103198011in5|ali|phd|phdHtm|42412-1.2526,48,72,112,152,192,251,294,337,379, 416 MISEVEIITLGIFIATYAVI
34d103118511in2|ali|phd|phdHtm|45390-9.1227,93,116,144,167,208,239,278,300,326, 348 MREIRIPKALTLLFIVYMVV
35d103070111in1|ali|phd|phdHtm|41390-13.5757,79,122,151,174,196,261,298,332,354, 400 MTLMKTRKNTILQGIRERAG
36d103127411in1|ali|phd|phdHtm|48390-10.1264,93,133,165,202,254,320,348,402,424, 464 MLWEIIRVTYRELHYRMIKE
37d103132911out2|ali|phd|phdHtm|400313.2237,62,119,156,179,203,259,298,329,355, 395 MGFEQALIDFFEHMGLLNLT
38d103093111out1|ali|phd|phdHtm|381515.0649,99,121,151,173,218,246,287,309,343, 366 MNKTKKLLKFEFLAQGSLGA
39d103195411out1|ali|phd|phdHtm|533606.3235,82,125,173,212,278,319,355,397,419, 502 MSDFGILSLLPPLVAIVLAI
40d103134210in23|ali|phd|phdHtm|42542-4.8930,69,105,163,214,253,275,329,358,387 MGLYRKYIEYPVLQKILIGL
41d103062510in3|ali|phd|phdHtm|28491-11.7433,56,89,111,135,162,192,220,249,272 MKLMDETRKAELILLGLSAI
42d103092110in3|ali|phd|phdHtm|33033-3.4034,60,97,126,160,194,228,261,291,320 MRMGVKDFAPSWFASVMGTG
43d103131710in3|ali|phd|phdHtm|75860-6.1324,81,108,205,245,300,326,375,412,453 MKRRYSILIILLVAIFYRMI
44d103010210in1|ali|phd|phdHtm|46230-3.3828,96,121,148,193,223,271,299,323,351 MKIKGTEKVPILIFLGALAI
45d103014910in1|ali|phd|phdHtm|37881-8.6129,66,112,136,168,208,245,288,336,361 MSNGHRYGIFYRWLLPAIIF
46d103038410in1|ali|phd|phdHtm|45781-8.1335,79,127,178,255,288,325,352,398,428 MHSKQSTNIGGMKMGNFRRK
47d103072910in1|ali|phd|phdHtm|38891-10.5040,66,107,162,189,251,308,330,359,382 MIFMRWNEIPREAKAYMLYH
48d103130510in1|ali|phd|phdHtm|37291-10.2522,60,101,123,157,179,217,287,338,362 MQKLIILILISLGWIFNYSH
49d103004310out9|ali|phd|phdHtm|370929.8719,57,104,150,184,216,252,293,322,357 MLKLILVGILVGLIVGAYKV
50d103117410out5|ali|phd|phdHtm|318727.4322,54,93,120,148,183,220,257,279,309 MDISLVLLSIAFYIAWNIGA
51d103050410out2|ali|phd|phdHtm|325929.1133,63,105,132,154,194,222,261,291,318 MSGISSLGGRVGVTILEILI
52d103085210out2|ali|phd|phdHtm|368121.2933,57,109,141,178,230,259,298,329,365 MDYEGIRDFVKKEWFLFTLI
53d103178610out2|ali|phd|phdHtm|2929315.1228,53,89,120,142,175,198,240,269,291 MEVYSMNFALGVILAFSAAF
54d103040810out1|ali|phd|phdHtm|408424.8834,64,108,137,183,233,271,320,345,398 MSESLKLKLIKNAAWLFGAE
55d103075210out1|ali|phd|phdHtm|398212.8943,74,106,168,196,239,271,315,358,387 MIKMEKERKIAGISWNVFLL

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