--- -------------------------------------------------------------------------------- --- --- All proteins with at least 7 transmembrane helices in Pyrococcus horikoshii --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 56 d1031279 9 in 19 343 3 3 -3.20 31,80,113,150,176,223,272,309,332 MYEEYVRKRILAILFLLLLI VTSFLGAPMFLYLLIRMEGR 57 d1031811 9 in 12 468 9 2 -9.96 49,91,133,164,190,258,304,364,434 MGARDVIYAMEKWFPEVERP EEIAREQITEMFPALRRLFK 58 d1030591 9 in 3 573 9 1 -14.64 46,69,225,250,298,320,472,519,552 MIPMPKEEKISIFVKADLNP VLMSKFMSVGGGSLILFLLG 59 d1030165 9 in 2 403 7 2 -7.69 43,67,168,196,242,275,312,366,389 MIPLKSLEKTSREMEAKRAL PFSIVLIIMGRYIGRDENEE 60 d1030990 9 in 2 268 9 1 -9.44 28,53,84,113,135,162,201,226,255 MMEERSEGVILALIGMLLYG TPWHIFGFLFITVGTLGLTR 61 d1030082 9 in 1 275 6 3 -6.88 24,53,90,113,140,162,195,220,265 MRGYLLVFLAASMWGTLGIF SIVQLIGASMIIGGALLAKT 62 d1030101 9 in 1 334 8 2 -8.29 27,49,84,121,150,179,208,283,320 METSEKIFVGLSLGFLVLAI KLATLFLLPFIGGSKSENKG 63 d1030860 9 in 1 339 1 0 -1.30 35,60,101,125,159,188,229,264,319 MKMNWLKLKEHLDKFLPVYV YVKAWRGIAGLWNCRITATP 64 d1031539 9 in 1 298 9 3 -13.78 45,69,104,131,157,187,215,242,284 MELSSSESLGFSKILKERVK ILGSTIVGLALILLGIALSR 65 d1031907 9 in 1 310 9 0 -10.75 31,63,102,138,160,182,229,251,294 MFKMKRSSLRRALSPIAFLI SIIGALVFYKLLGGWDEDSS 66 d1032059 9 in 1 335 4 2 -4.19 23,53,80,145,170,192,255,284,322 MKKYLLIIIGVTLVLILLWW IPTLLGGILVLKNRKLLVSS 67 d1030816 9 out 8 526 2 2 2.13 44,117,232,270,302,388,435,484,508 MNSLHGGSAMGGIMDFVNWL ALIVLYPIIKQYTEEFIAKN 68 d1030645 9 out 6 285 2 1 2.71 22,52,85,134,178,200,228,262,284 MLLGVLLALTSAFCWGTSSV PNWKIIVSLILVVLGIWLIS 69 d1030475 9 out 4 394 0 1 0.17 18,72,97,128,161,208,232,261,386 MIPLILGTIVGILTSYTDVK LTSYFFGDVLWWLILKVSGL 70 d1031140 9 out 2 403 0 0 0.91 55,98,120,172,238,274,326,370,392 MPLGRDFWLFSVGRWISTAG GILITLYYWVRYSKLLVSLN 71 d1030245 9 out 1 385 0 3 0.00 31,62,98,153,187,228,268,307,376 MEKDAKVLVIATAVGQLFLQ TAIFYIIATTMFYAFFIKYN 72 d1030925 9 out 1 341 1 1 1.13 57,93,129,165,194,231,263,300,324 MKGREMKIVEFMKDKMVYIV KLFTLIRKKYIHNERKSITG 73 d1031429 9 out 1 442 3 4 3.89 36,74,124,190,233,322,361,407,430 MIGIWTFTLVPKILIMGGLT GLMLLIPLAFNKLLIKPTTK 74 d1031703 9 out 1 473 6 0 6.40 62,222,251,287,325,368,391,421,447 MIKEARLNDYMGDEVWYVPA FERSVKIYMNYLRSLKEFIK 75 d1030826 8 in 19 331 3 4 -3.45 25,81,123,164,209,257,295,319 MKKVTTLLIVLSVASIFLAL LFGAPFFAYLLIRKKRGELY 76 d1031500 8 in 10 309 9 2 -9.32 23,90,115,152,187,237,277,309 MLRVVIDALLILIYATFVGF AEFYWKWPTIIAALGAILAS 77 d1031248 8 in 7 661 4 1 -4.49 307,365,446,473,533,581,624,655 MLKVVALVGNPNVGKTTIFN IYNLLLATTVGIIAYHLGLL 78 d1030549 8 in 3 252 3 0 -3.20 30,59,82,111,163,200,222,244 MLDLLLKSLITGLITGTLAA AIVMLILAIRMILKGLGYNV 79 d1030100 8 in 2 336 3 0 -3.51 33,78,115,144,175,251,273,309 MRDIPLLIPILLILFVSLGL GNLRKDIRRIISWISSSSNN 80 d1030734 8 in 2 439 4 1 -4.19 50,119,141,187,260,289,322,347 MRRLKKQELIALKSREKAKY REGQPLNFGLLLRRSGKGLG 81 d1030368 8 in 1 373 2 2 -2.81 114,145,180,219,251,278,328,367 MILVGYEIDVEEEEHGVEEA AILIWIIFAISAVPVPFSQR 82 d1031040 8 in 1 355 9 0 -9.54 56,78,108,177,231,264,287,338 MRTWKMRKDGQRIDYLGRKW LNVAIEMLREWKNVQAKTER 83 d1031584 8 in 1 420 4 0 -4.82 39,187,213,270,317,349,372,400 MSDFMVILMKELRDMLRDRG TARLFSSEKLLTARLKLKRR 84 d1031706 8 in 1 276 2 1 -2.96 38,67,89,113,157,206,246,269 MIEEYLLRALLASLMVSTLL GLATIFLGTIYGVLALRRKI 85 d1031489 8 out 66 321 9 3 10.15 24,87,115,155,196,247,284,321 MSIIYELIGLILLYIYVSIT WTRVFAASVVGALLLVLGVR 86 d1032051 8 out 6 659 7 0 7.36 395,434,472,511,534,561,584,614 MFKPEKIVKIEVITLTRFRD EGRKFEPFAAKREVSELEIE 87 d1031769 8 out 3 337 1 2 1.12 34,79,120,149,197,247,287,326 MLKGEEKISKVTEVLLSVFM LALAIPYAYKMLIKKFTEGR 88 d1031878 8 out 3 329 3 1 3.74 31,99,132,175,203,252,274,314 MGIPTRQILRIALIYASLLM IQLAVSIFLELIKGMLDPRV 89 d1030038 8 out 2 277 1 0 1.01 29,51,111,148,170,227,249,274 MEPKAFVEIMRPHNCILAGI LKFATFIAVISFLLGALTRE 90 d1030141 8 out 2 267 9 0 9.28 47,77,107,138,160,192,225,255 MGIKVNLHQFFWEYFIRPMY ILGLGPGIRDPAQMVLQIPC 91 d1030201 8 out 2 373 4 0 4.86 111,140,162,220,242,293,329,358 MRELLNLIEGVAFGTLTGLT GVARVTYMGVLMVPILVETI 92 d1030665 8 out 2 269 8 1 8.81 43,78,101,142,164,196,225,269 MLENLLSTLSSWLLLASHGN LVTLGFFLGFYVMLFLDSML 93 d1030680 8 out 2 303 5 1 5.07 46,74,135,164,191,228,255,293 MLKSVNLPVCHSLRNHLAVS ILGSKPYFFWLHAFSERYYV 94 d1031661 8 out 2 447 1 2 1.34 25,91,152,190,230,275,311,336 MKKIKISGIIISAIYTCIML ELTRYKKIFEKDGVIIMLRK 95 d1030923 8 out 1 280 3 1 3.96 21,43,109,153,182,211,235,264 MIGVAILTYILASIFAIAGM LFAFLYGTGKKFKEGKALPA 96 d1031183 8 out 1 507 5 0 5.33 82,104,159,181,209,280,312,339 MRKTYYFFFISIWTLTFIPY ESTITLAFVYRFYRKFFSYL 97 d1031184 8 out 1 502 5 0 5.50 30,98,196,227,270,295,331,359 MGCTMKRKKAQLLWLLFIAF GDNFRIVFQWGEFYILEKNI 98 d1031768 8 out 1 302 3 0 3.45 29,54,85,107,148,208,252,287 MIADLLNILSNTLVSMVPLT VALIMKKVRMPRALGKPYIK 99 d1030844 7 in 19 323 8 0 -8.59 31,120,160,207,265,287,311 MGSMKVYIIKRSIQLILVIF VAVAIFITDLLYAVLDPRIR 100 d1030034 7 in 16 277 1 1 -1.58 34,94,131,160,210,232,263 MNEKTVFMLKKVAFYAFIFT AMLFIFFARRYLVTMWGITL 101 d1030534 7 in 16 330 8 0 -8.18 30,124,164,209,268,290,315 MGFGDYLKRKIIVYVLTFIF FVIDIVYALIDPRVRASYLE 102 d1031459 7 in 16 332 9 0 -9.94 30,120,160,216,274,296,321 MANLKKFLIRRLLTFIPTII YVTINLIVDVLYAIIDPRVR 103 d1031077 7 in 14 276 3 0 -3.00 29,92,128,156,204,226,261 MKIRRYLVPNLIAWSIGIAW LVYALFQKYYISGMIGWSVE 104 d1030789 7 in 13 279 2 1 -2.44 35,97,133,158,205,227,263 MISEKTMKKLWLLLTYSVLI LLFVALNKYLIRGIVVTGGK 105 d1032031 7 in 9 349 6 0 -6.14 30,143,182,228,286,308,333 MGLGKYLVIRIINALIVLSI IADISYGFLDPRVRVGASAK 106 d1031864 7 in 4 224 9 2 -13.69 20,47,78,108,134,161,221 MKTFGAFITIALYAFFSYLY GMALNGIFTAFILPALIEVI 107 d1031394 7 in 3 242 2 2 -2.83 33,55,88,111,183,210,242 MNYVELALISFILSVIFSIG EQVKKAIGMILYLMVVKMLF 108 d1031733 7 in 3 481 0 0 -0.69 94,138,318,395,417,441,471 MCEYTYSNGKKCRRKPLKGS AIFGMFMWAVFLTVFARKYM 109 d1030271 7 in 2 377 0 0 -0.95 25,86,128,157,196,325,373 MGLLGTLTYAILGILIFWAL MLISLLLLGINLIPAIRGFV 110 d1031282 7 in 2 237 8 4 -8.50 26,56,94,116,161,201,237 MKREIKYLLIIIGIAFGLSS SRELSVVSGILLIGIGAWIL 111 d1030649 7 in 1 265 1 0 -1.61 34,63,87,118,149,179,240 MGPRWTRLQVEVLILQLPPY TLLLSTASVRLIASLPHEET 112 d1030821 7 in 1 598 9 0 -14.82 145,192,214,263,294,328,350 MIAISSLLGLVVRSFYFLLP PNTTYKIPIGVKEIMLKREG 113 d1031626 7 in 1 341 9 2 -11.81 26,48,81,153,217,264,315 MVELEKEKIVWIAIILLIIF IDAWREIGTKQPSKAHRSQD 114 d1032030 7 out 14 474 5 2 5.03 41,221,290,331,353,407,456 MRWVDIKDSLSNFWFEFKRQ LTFVLIGTALDRVLNPRLRR 115 d1030166 7 out 13 248 0 2 0.81 31,76,112,135,186,208,239 MMGRDYALYFFAALGSFLVV LMLISLSIFVFLRWLIGRVR 116 d1031610 7 out 11 366 1 0 1.09 19,41,82,135,181,203,284 MGMIFEVINLGMRGIIWGFS SQNQWKIIAREFENLKNILA 117 d1031964 7 out 3 267 4 2 4.65 42,71,100,138,160,225,261 MLRDFFEKYFVNPIKYNTGY VIFILGFAPGTRNLLRMLMG 118 d1030217 7 out 2 312 7 0 7.82 32,91,132,154,186,239,295 MSNDKVRALSFFLSPMLLMV GMITLKVLKFEEMIKKPRGD 119 d1030412 7 out 2 276 4 0 4.85 50,72,115,155,195,249,271 MNVYPLPVVYTFKRFFEGVK VLLGYSLLFYAGSKVFRGGA 120 d1031910 7 out 2 273 2 4 2.45 46,89,137,172,196,218,256 MGVIEELEALKGVARKNWKI LGVISYRWAERRAREVGLKS 121 d1030857 7 out 1 249 2 1 2.16 45,71,102,131,153,181,236 MVKMIEQLKRSFAVAKKDML GILFFLSGVAIHKKVLERRF 122 d1031348 7 out 1 195 9 2 15.02 23,46,68,113,135,157,184 MSGLMELSLFLYSTLFVGVI LIFILWLKFDLARLWRPPRI 123 d1031565 7 out 1 310 5 1 5.03 25,59,110,143,166,262,288 MQLVEQLILMVPLLVVYVLL LDKLSERERAMLRSSLGDNN