--- -------------------------------------------------------------------------------- --- --- All proteins with at least 4 transmembrane helices in Pyrococcus horikoshii --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 124 d1030845 6 in 17 283 9 2 -12.03 36,101,142,164,214,262 MVNKVFRALSEIKYTKTGLI LLGDGLLTLLNPKLRRAIGV 125 d1031460 6 in 17 385 9 3 -12.06 74,160,193,247,304,353 MQEEYKKTILDKTADKLVYG RTRRSIEFKVKKGKKEGEES 126 d1030535 6 in 15 304 8 4 -8.57 33,121,157,179,235,286 MEVIKLAFRNNKFKFGFGML TSLFFINLGLEEVFNPRLRG 127 d1030788 6 in 13 313 9 5 -9.78 41,113,148,199,246,302 MPSFLSNFYEKAKNKEIVAG LFAIIFTTTYLFQRRFGRAI 128 d1031258 6 in 12 292 9 4 -11.75 35,91,123,178,226,281 MRRSPDLPYIILFLIPALIL LLMALVVVLPYLYWSYKGEE 129 d1031079 6 in 11 291 9 4 -10.62 31,95,127,183,230,283 MRRNLTPFFFLLPALTLMVP VAVLLTALTFIPALWLIKRR 130 d1031259 6 in 9 275 8 5 -8.50 30,89,128,156,207,259 MRRISPTRFLLYIVLIFLAA LIMIALGKYLIRGYTSGALK 131 d1030365 6 in 8 273 3 4 -3.15 50,90,114,152,201,272 MKKAGIVGIDVHKLDKREVP ELVLTVLFLEACLGILAILL 132 d1030933 6 in 6 295 2 3 -2.13 35,59,98,130,167,189 MTHYENLKRKMMLSFSLNLG TIQLETGRCKEKSMICNEEY 133 d1030274 6 in 3 243 5 3 -5.81 29,66,123,184,206,243 MLVMVSQGIGMEGLLAIIVI TNFVATLLGGVIGILMFLIV 134 d1031543 6 in 3 232 5 5 -5.55 40,74,133,165,187,214 MKGLKLVVWESEDPIKGYML LMISIVVLPTSIWLFVRRDV 135 d1031997 6 in 3 355 8 2 -8.04 48,80,115,142,171,198 MIYSLVPYINLFSRITLLGA INPKALGEQELKIIEKEFQK 136 d1030216 6 in 2 289 6 5 -6.46 36,101,138,168,227,275 MKDVETRSKKGEVVLILAIF IIFFLTAQQLLLRGYSGGIK 137 d1030277 6 in 2 192 6 6 -6.48 38,83,105,138,163,185 MRGMKLLNLKSFKPCLFEMK VAETISIVVFLIWHYLMLGD 138 d1030516 6 in 2 307 3 0 -3.23 32,132,160,184,232,256 MSAPSITNSTSLPIFLAKSL ESIRKALTPFKGASFWNLTF 139 d1030545 6 in 2 352 6 2 -6.93 57,79,113,139,164,201 MSPLSLGFAMIITIGIKLTG LITSKEAWGEKEWSLLVRMF 140 d1030707 6 in 2 199 5 1 -5.62 26,48,91,113,138,192 MGGDKVKFTILVLISLSIGF IHGFLLSLLVPIIVPALTSG 141 d1031414 6 in 2 310 9 4 -9.40 44,80,133,168,203,299 MTILNIAIKELESGIKTKRF LVTLFVSLGLSYYKFANMDL 142 d1031548 6 in 2 197 9 4 -11.46 30,75,104,133,161,183 MKDLRLHKYFPGTFSLIILT YYYGKWLRRKMLDMSYWLEV 143 d1031912 6 in 2 255 6 3 -6.64 26,67,124,171,200,237 MFFRYPLRVISSVLVGLVFL ISLGVFKWAERITRMMGYGG 144 d1031971 6 in 2 368 9 2 -11.88 180,212,266,294,328,359 MKVLVLAIDRDDDFGVKAGV VVIDILISIIISIKLREKVR 145 d1030077 6 in 1 237 9 0 -9.51 22,57,83,129,165,212 MGNLTTILYFAYAPALALLW LGRKEDMERFWWYRILGGRR 146 d1030345 6 in 1 320 6 4 -6.57 31,57,79,121,144,203 MQAKLRNKIISVAFYLISIV EKKEIERRKKIVEEVFRRMN 147 d1030390 6 in 1 230 9 2 -18.12 50,72,115,137,186,227 MKNILPFLTRIPIKGDFEKA GAVAEITRVGTLVVITLGWR 148 d1030688 6 in 1 308 3 0 -3.10 69,91,181,236,272,302 MKELAKEVVVSSRLAKVIES IIVALMAGFVFWIGLRVGIG 149 d1030902 6 in 1 322 9 3 -15.51 38,72,133,167,199,313 MKVINVGMKDFEVGIRTRRF LTIASMLFIGLSYMRFVKMD 150 d1030950 6 in 1 257 6 3 -6.53 44,88,145,167,189,247 MEEMNVFLTMIYRELKRFIR ILLALVFAGFAGLEFRKAYL 151 d1031212 6 in 1 286 9 4 -11.17 37,84,138,167,233,261 MGAIKSFGESIDLLIRHKKL ENIRVDYERRREILNWLISS 152 d1031418 6 in 1 330 8 3 -8.88 38,88,147,187,209,320 MGAELNIASKELYTAVKTKR IVELLFPFSIAYARFMTKDL 153 d1031561 6 in 1 441 0 2 -0.40 25,115,258,292,323,363 MRRILLSMIVLIFLASPILA VVDMDGLTLIVVRERKEGGE 154 d1030035 6 out 12 284 0 0 0.87 31,117,142,171,219,274 MKFKSKYIPYLLLIPAVAYL SLALGALYVKFLKAEYLEVR 155 d1030794 6 out 10 201 7 3 7.05 28,73,95,134,160,191 MLEAIKTFMILYTGMFAITN LILTSMAMQMIINGIKGAFG 156 d1030226 6 out 7 202 7 0 7.70 24,63,85,121,150,190 MLKEILSSALLMLIMIDPSD IGAQMMITGAGGIVLNLIKG 157 d1030406 6 out 3 171 9 5 9.38 18,52,75,106,133,155 MIWILASLIAGIALRAWSVF SILLAKPIERREMRVKSGRG 158 d1030413 6 out 3 288 4 4 4.11 77,141,163,207,260,284 MIALNNKIRAIALIPSGYGL YLIPFAVNVVLILLSYLASR 159 d1030143 6 out 1 249 5 4 5.40 49,87,111,149,196,242 MMYSLYVEKRSLLHALDPRV VIVIVALLYLGIKFSLLPHL 160 d1030171 6 out 1 162 5 2 5.44 21,45,70,97,124,149 MKAKEVSLVALFVALTSVGA VPDIVKAATAVIIAERLQGN 161 d1030266 6 out 1 191 0 2 0.58 29,52,94,126,148,178 MSKAKLVAFTSIMVALSIIF QTGVDIFVASPVIKRLKVEE 162 d1031736 6 out 1 213 3 5 3.02 24,56,79,115,161,201 MNSAPFLIFGGILAWLFVYF LFLLLISLPRIRVEKEEGPK 163 d1031895 6 out 1 202 3 5 3.50 33,62,94,120,159,189 MGRMNEATLEAYVPYFKAIV VIGGGLGYILKKRLGNMLAL 164 d1031792 5 in 218 582 2 9 -2.77 45,86,174,273,295 MRNMRNNESSFSLLIRFIRE KLLLEKKGYFYRLYTSQVQE 165 d1030393 5 in 4 283 0 2 -0.29 67,89,163,211,283 MYELILALGWDLLLGEPPAV LKVYVIVVSEWILLLLLGVI 166 d1031576 5 in 3 236 1 3 -1.75 116,138,160,194,219 MELASPISSSFLEAFSRLSL SSTIWRAFLTLHPFKFSIYS 167 d1032055 5 in 2 507 5 1 -5.95 29,365,391,413,487 MKWKKIILNGRVLLLITFLI GILITRPAYGEIAKVLIGWR 168 d1030449 5 in 1 371 3 1 -3.15 34,71,109,146,286 MHGLIRALKEHEPLPSYILS RAKRLQEFAKDDEKYNDFIE 169 d1030595 5 in 1 330 9 0 -9.31 25,152,192,241,313 MRVSDILISLLLVGIVVPSV LAMIKPFLGEPEYISLGRFW 170 d1030687 5 in 1 358 8 2 -8.16 144,167,210,319,348 MIEVPGVVEGFLRFLEKLGG LLGFPTLSFIIIMMIKRAEP 171 d1031142 5 in 1 431 9 1 -9.36 36,71,93,122,205 MKIMFSVEEGIRFKIRDALK IDRARLNRRIKELVEKLMEY 172 d1031526 5 in 1 204 1 2 -1.42 58,80,128,168,196 MVPMPVCSPWRAGLSNSISR AIAHLMPLSLILLITLSTSF 173 d1032056 5 in 1 293 3 1 -3.92 39,166,188,255,279 MALMIKEKLEVLVKMDPKRM NTWIFNAGVLRLYIKKREGK 174 d1030353 5 out 6 335 9 3 9.64 30,72,94,137,169 MVTMQFTTQEILKAIATLIG IEIPFPQHVNWFAEELKVKI 175 d1030349 5 out 4 274 0 3 0.68 37,62,84,118,154 MIKILRGLIVTLVTYGMLKF LEVLDSGKRVVLYSNEERIE 176 d1031316 5 out 2 140 1 5 1.32 25,55,87,115,137 MTIMQAYLIYAVLAAFFASL MNIKTVIGALLIVLGAILVS 177 d1030473 5 out 1 168 1 4 1.14 45,88,113,135,161 MPTTSAPCLVTSTLSLILSP YLMVSVILLMFSCSLWASAL 178 d1030570 5 out 1 290 4 4 4.06 39,79,109,157,203 MTEKVYIGDVKTLLFIGTLL RKVKEIKVILVGEGEVILEL 179 d1031103 5 out 1 168 2 2 2.22 42,69,104,132,159 MEEVRELKEVLDKVEKKLVA LIILTYSLVALINLYKAFRV 180 d1031115 5 out 1 215 1 2 1.87 48,72,109,140,213 MLPYFLSRSIASITSDLMSS PQILCTVGFPLLVSSISIIS 181 d1031254 5 out 1 194 9 1 13.34 27,71,93,128,163 MELQLMIGYGLLLVFFLMKL IALLTFLGAKKIKKINLLSR 182 d1031865 5 out 1 189 9 6 12.09 41,75,120,143,174 MTIILAFLSFTPALVSHDLK IPSFLVHWIGSAFFDFLCII 183 d1031880 5 out 1 398 8 3 8.87 222,253,277,343,384 MKVKRKAGLITLAFLIAFIT MMGVLSLSLALISERLPESY 184 d1030748 4 in 6 137 9 0 -16.59 39,70,97,119 MRIFKLSPDEEERFFDNLPR LFLIYINTLIKTKEELRKKN 185 d1031712 4 in 6 184 9 3 -10.07 23,62,95,165 MKKLILLGILSLIIGLLEAL SLFYGAFIDESVKVVWRRMR 186 d1030343 4 in 5 1003 4 0 -4.76 22,269,831,854 MKRKIISIIILAIVGLSLTF DFKTFIKLVGGKRTNAGKTK 187 d1030646 4 in 3 332 8 0 -8.76 24,148,190,250 MKRIPSLIIGLLLILATWHS VEREKSGKTFIVRVIKKIKI 188 d1030814 4 in 3 269 9 4 -10.72 25,58,96,156 MSPVKLKILITFIGILFILG KVTINDAERAYKLYMVIKGE 189 d1030841 4 in 3 152 3 0 -3.01 25,53,110,139 MGRGARIGIAIVLLLTLLVA PDYGIFLIMILSIIGLVLGR 190 d1031422 4 in 3 247 1 3 -1.05 120,149,178,232 MYLVKSPEILREVSENLKKA IDFGLLSYGLYGLAKHRYAF 191 d1030342 4 in 2 364 4 0 -4.10 91,175,331,354 MSSAIKIAEEFYNDEYSDSV AAFLSYIFGHIMESLFNVSA 192 d1030999 4 in 2 140 9 6 -10.24 42,85,110,133 MLSSKFSNQSNPRKTLYKDR PACFITLSISSAISSRTSSA 193 d1031224 4 in 2 143 9 9 -9.29 27,59,105,130 MVPKLILKGIWSGIISFLLL SLWLVYSCFWILKKLAELRF 194 d1031300 4 in 2 292 5 3 -5.26 38,60,166,203 MSKMGLGLWIRTGILMTLLT PPTEKRIERLRKIALEMGII 195 d1031463 4 in 2 129 7 8 -7.02 38,65,94,118 MRGKELTRILDTIFDLVGWL GLVIVALGWIYVNLRESGQQ 196 d1031506 4 in 2 174 5 2 -5.66 36,58,88,130 MRGGVKMTEASRVSRYLYTF IEGASEHITKPFEKFLKVIF 197 d1031553 4 in 2 123 4 2 -4.29 29,55,82,117 MNAKIIALLIIGGGLGALTR ITTNILVTIFLVFLGFILAR 198 d1030225 4 in 1 171 5 4 -5.75 83,111,135,164 MNYEEHVLLGLGTYPLFVLL GFASFMGYLLHLIADKSVKL 199 d1030288 4 in 1 233 7 3 -7.26 35,89,175,214 MDKCYFCSSCPNSWFFIDKF GFQPIFSHFSFSRSNASVSS 200 d1030483 4 in 1 135 4 0 -4.76 23,47,88,122 MSYLLISSPLYLFIIAETLR LTAISPAALTTPPRSLSLSV 201 d1030489 4 in 1 188 9 2 -9.06 45,67,113,174 MLSKIRPKVKQPLERIGKTL ILSWITFIQRVYEAKKRLEM 202 d1030808 4 in 1 138 3 9 -3.75 32,61,99,128 MRGLSSLLLMIVLALLLYPL LLAVLFLLLLYAFIRISVLS 203 d1030905 4 in 1 124 1 6 -1.82 33,56,83,110 MCSMGAVERRLLWIGGVVAL ISLIEIIKNTNAIIKNWNYG 204 d1031347 4 in 1 201 2 6 -2.93 51,75,122,182 MQSQPYGSTWKLKSLKKLNT LGLYILDFTLEFKHQGEENE 205 d1031393 4 in 1 245 3 5 -3.75 68,97,127,153 MSLENLLYSIGLAMEKVFIK VRILEVSQSSQTSTEPKEES 206 d1031479 4 in 1 147 9 3 -9.07 31,59,93,136 MSDMGVIVKTNARALIPLIG KVFTGLVSAVFALALFRRWK 207 d1031504 4 in 1 241 9 4 -13.12 125,155,190,222 MGEVVSMLKRLLSIILILII IKVGTELSGIIDNMLKEEVK 208 d1031847 4 in 1 156 0 1 -0.57 25,74,110,145 MKREVTIVMVIYFIIGLALV IPELIGAAAILSYILYLGWK 209 d1031857 4 in 1 123 9 3 -17.58 38,60,86,111 MKEIGKKYISAISFIFLIGI VTAIIAIGGMIKAKGVSAEV 210 d1031899 4 in 1 338 5 4 -5.56 35,57,80,105 MDKLKLYIGLFIVIILGIAG KYEEYRKKIMKSNEETSNFP 211 d1031793 4 out 242 580 1 2 1.31 39,79,168,267 MDGSLRQLERLLSYLREYRW LVKKGGAFSEMIRAIGEEYE 212 d1032050 4 out 24 162 3 0 3.48 26,75,113,160 MKIMDPIVYVSLGMALGAGL AMAETMAIFGLVGAIILIMS 213 d1031407 4 out 8 148 0 3 0.55 32,57,86,108 MLYEEVVSSRLLNLILGIVL TNNPEEVGNILSMLGVPKII 214 d1030908 4 out 6 120 9 9 10.96 21,43,84,111 MVKKLIIAVVVGLLMALAIN TFAFTLFYLTLGEIIEFQWF 215 d1031675 4 out 5 185 7 5 7.59 28,88,128,177 MSRNLKLFIILLGVFIFGTL SLLFIAALIEAFITPKLAGI 216 d1031863 4 out 5 109 1 5 1.26 21,45,75,99 MYRGLAIIFGFLFLGEIIES LVISFIITLFVTAKTVEVLR 217 d1030976 4 out 4 202 4 6 4.88 44,110,132,174 MSLKLELKRKALHMTGLSVP PDDNFSNQLAIAITLYLAGV 218 d1030547 4 out 3 111 9 1 14.40 32,54,78,108 MASTSPRDLTPSIAIFLHLL TVVFPAAIFPAIPTIVFSTP 219 d1031574 4 out 3 133 0 6 0.78 32,71,97,126 MGKTSGTSLWISLRVSELIS YSLNIPFLVVITFVNVAIIL 220 d1031611 4 out 3 159 6 4 6.12 38,74,123,159 MLTLFTALSSFRRFSSSFRW SRASIGTTVAYICSILYIKV 221 d1030603 4 out 2 181 6 2 6.24 22,60,114,161 MNFIPIVQMASMILLVIASF AITKVSPAPFLSKKLFAFST 222 d1031368 4 out 2 190 4 7 4.71 42,78,116,168 MSLSNAKVYGGIGAILQLIG VVAFFSLPEEIKESEIAPVS 223 d1031665 4 out 2 183 4 2 4.68 78,110,142,171 MKFNKAMGMKYLKWSGTVGG LEETYEIVLIMLFTFFVAVR 224 d1030088 4 out 1 282 9 2 11.42 30,69,101,148 MRIINLTYFFRDLLVFIITT ELEPVSNLNINEIELLNNPQ 225 d1030118 4 out 1 124 6 0 6.69 31,54,80,102 MGVTYVGYQHIHHSAEIAVS PSSFITTKEPTSNSIINLEA 226 d1030156 4 out 1 323 6 0 6.31 49,87,282,316 MKKSTSEISVIAYSKDKFMS LVVMFALAIGMLLYFKKKKW 227 d1030399 4 out 1 327 3 3 3.49 45,91,113,162 MRKYWDLISVIVLSLLLDLI ILEAINGTIQSLKLNVQVKG 228 d1030636 4 out 1 164 0 7 0.00 22,55,98,147 MIRVSSSFLFKFIITLNLFI YTLFALYCWMNVQDKQNSII 229 d1030887 4 out 1 111 0 3 0.81 26,48,83,105 MLEIFSFMFFTGGGLVMLFI APLLLVGPGLLLGLWIFLKG 230 d1030995 4 out 1 167 2 5 2.13 30,77,107,151 MLILYLISCTFFPFSSNILD VTLAIPDSSVALTLISLIVS 231 d1031092 4 out 1 207 1 1 1.19 27,61,83,192 MPFPYGVMSCIVIGTTAGIL FTSTFSIPLSLRNLATFSPV 232 d1031346 4 out 1 162 3 4 3.77 25,77,102,141 MIVVGWGFSVSPSVLLLLFF KVESPKNTGSWAYLEYTPSH 233 d1031390 4 out 1 476 0 0 0.89 31,128,304,465 MRRGQLLSIDALLSLVVMAF KWVIKPMKDLALVKLVVWDD 234 d1031416 4 out 1 176 1 5 1.46 63,87,125,154 MGSTIAKQEVKQGTYSFPSL SGSRPLVGSSRIKSSGSFMR 235 d1032058 4 out 1 239 2 2 2.13 25,60,84,196 MVNLMVLSYRFIVFLLFLIL NPNAIDKRDLSLLEREFTPL