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Transmembrane helices for pyrho (Pyrococcus horikoshii)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
124d10308456in17|ali|phd|phdHtm|28392-12.0336,101,142,164,214,262MVNKVFRALSEIKYTKTGLI
125d10314606in17|ali|phd|phdHtm|38593-12.0674,160,193,247,304,353MQEEYKKTILDKTADKLVYG
126d10305356in15|ali|phd|phdHtm|30484-8.5733,121,157,179,235,286MEVIKLAFRNNKFKFGFGML
127d10307886in13|ali|phd|phdHtm|31395-9.7841,113,148,199,246,302MPSFLSNFYEKAKNKEIVAG
128d10312586in12|ali|phd|phdHtm|29294-11.7535,91,123,178,226,281MRRSPDLPYIILFLIPALIL
129d10310796in11|ali|phd|phdHtm|29194-10.6231,95,127,183,230,283MRRNLTPFFFLLPALTLMVP
130d10312596in9|ali|phd|phdHtm|27585-8.5030,89,128,156,207,259MRRISPTRFLLYIVLIFLAA
131d10303656in8|ali|phd|phdHtm|27334-3.1550,90,114,152,201,272MKKAGIVGIDVHKLDKREVP
132d10309336in6|ali|phd|phdHtm|29523-2.1335,59,98,130,167,189MTHYENLKRKMMLSFSLNLG
133d10302746in3|ali|phd|phdHtm|24353-5.8129,66,123,184,206,243MLVMVSQGIGMEGLLAIIVI
134d10315436in3|ali|phd|phdHtm|23255-5.5540,74,133,165,187,214MKGLKLVVWESEDPIKGYML
135d10319976in3|ali|phd|phdHtm|35582-8.0448,80,115,142,171,198MIYSLVPYINLFSRITLLGA
136d10302166in2|ali|phd|phdHtm|28965-6.4636,101,138,168,227,275MKDVETRSKKGEVVLILAIF
137d10302776in2|ali|phd|phdHtm|19266-6.4838,83,105,138,163,185MRGMKLLNLKSFKPCLFEMK
138d10305166in2|ali|phd|phdHtm|30730-3.2332,132,160,184,232,256MSAPSITNSTSLPIFLAKSL
139d10305456in2|ali|phd|phdHtm|35262-6.9357,79,113,139,164,201MSPLSLGFAMIITIGIKLTG
140d10307076in2|ali|phd|phdHtm|19951-5.6226,48,91,113,138,192MGGDKVKFTILVLISLSIGF
141d10314146in2|ali|phd|phdHtm|31094-9.4044,80,133,168,203,299MTILNIAIKELESGIKTKRF
142d10315486in2|ali|phd|phdHtm|19794-11.4630,75,104,133,161,183MKDLRLHKYFPGTFSLIILT
143d10319126in2|ali|phd|phdHtm|25563-6.6426,67,124,171,200,237MFFRYPLRVISSVLVGLVFL
144d10319716in2|ali|phd|phdHtm|36892-11.88180,212,266,294,328,359MKVLVLAIDRDDDFGVKAGV
145d10300776in1|ali|phd|phdHtm|23790-9.5122,57,83,129,165,212MGNLTTILYFAYAPALALLW
146d10303456in1|ali|phd|phdHtm|32064-6.5731,57,79,121,144,203MQAKLRNKIISVAFYLISIV
147d10303906in1|ali|phd|phdHtm|23092-18.1250,72,115,137,186,227MKNILPFLTRIPIKGDFEKA
148d10306886in1|ali|phd|phdHtm|30830-3.1069,91,181,236,272,302MKELAKEVVVSSRLAKVIES
149d10309026in1|ali|phd|phdHtm|32293-15.5138,72,133,167,199,313MKVINVGMKDFEVGIRTRRF
150d10309506in1|ali|phd|phdHtm|25763-6.5344,88,145,167,189,247MEEMNVFLTMIYRELKRFIR
151d10312126in1|ali|phd|phdHtm|28694-11.1737,84,138,167,233,261MGAIKSFGESIDLLIRHKKL
152d10314186in1|ali|phd|phdHtm|33083-8.8838,88,147,187,209,320MGAELNIASKELYTAVKTKR
153d10315616in1|ali|phd|phdHtm|44102-0.4025,115,258,292,323,363MRRILLSMIVLIFLASPILA
154d10300356out12|ali|phd|phdHtm|284000.8731,117,142,171,219,274MKFKSKYIPYLLLIPAVAYL
155d10307946out10|ali|phd|phdHtm|201737.0528,73,95,134,160,191MLEAIKTFMILYTGMFAITN
156d10302266out7|ali|phd|phdHtm|202707.7024,63,85,121,150,190MLKEILSSALLMLIMIDPSD
157d10304066out3|ali|phd|phdHtm|171959.3818,52,75,106,133,155MIWILASLIAGIALRAWSVF
158d10304136out3|ali|phd|phdHtm|288444.1177,141,163,207,260,284MIALNNKIRAIALIPSGYGL
159d10301436out1|ali|phd|phdHtm|249545.4049,87,111,149,196,242MMYSLYVEKRSLLHALDPRV
160d10301716out1|ali|phd|phdHtm|162525.4421,45,70,97,124,149MKAKEVSLVALFVALTSVGA
161d10302666out1|ali|phd|phdHtm|191020.5829,52,94,126,148,178MSKAKLVAFTSIMVALSIIF
162d10317366out1|ali|phd|phdHtm|213353.0224,56,79,115,161,201MNSAPFLIFGGILAWLFVYF
163d10318956out1|ali|phd|phdHtm|202353.5033,62,94,120,159,189MGRMNEATLEAYVPYFKAIV
164d10317925in218|ali|phd|phdHtm|58229-2.7745,86,174,273,295MRNMRNNESSFSLLIRFIRE
165d10303935in4|ali|phd|phdHtm|28302-0.2967,89,163,211,283MYELILALGWDLLLGEPPAV
166d10315765in3|ali|phd|phdHtm|23613-1.75116,138,160,194,219MELASPISSSFLEAFSRLSL
167d10320555in2|ali|phd|phdHtm|50751-5.9529,365,391,413,487MKWKKIILNGRVLLLITFLI
168d10304495in1|ali|phd|phdHtm|37131-3.1534,71,109,146,286MHGLIRALKEHEPLPSYILS
169d10305955in1|ali|phd|phdHtm|33090-9.3125,152,192,241,313MRVSDILISLLLVGIVVPSV
170d10306875in1|ali|phd|phdHtm|35882-8.16144,167,210,319,348MIEVPGVVEGFLRFLEKLGG
171d10311425in1|ali|phd|phdHtm|43191-9.3636,71,93,122,205MKIMFSVEEGIRFKIRDALK
172d10315265in1|ali|phd|phdHtm|20412-1.4258,80,128,168,196MVPMPVCSPWRAGLSNSISR
173d10320565in1|ali|phd|phdHtm|29331-3.9239,166,188,255,279MALMIKEKLEVLVKMDPKRM
174d10303535out6|ali|phd|phdHtm|335939.6430,72,94,137,169MVTMQFTTQEILKAIATLIG
175d10303495out4|ali|phd|phdHtm|274030.6837,62,84,118,154MIKILRGLIVTLVTYGMLKF
176d10313165out2|ali|phd|phdHtm|140151.3225,55,87,115,137MTIMQAYLIYAVLAAFFASL
177d10304735out1|ali|phd|phdHtm|168141.1445,88,113,135,161MPTTSAPCLVTSTLSLILSP
178d10305705out1|ali|phd|phdHtm|290444.0639,79,109,157,203MTEKVYIGDVKTLLFIGTLL
179d10311035out1|ali|phd|phdHtm|168222.2242,69,104,132,159MEEVRELKEVLDKVEKKLVA
180d10311155out1|ali|phd|phdHtm|215121.8748,72,109,140,213MLPYFLSRSIASITSDLMSS
181d10312545out1|ali|phd|phdHtm|1949113.3427,71,93,128,163MELQLMIGYGLLLVFFLMKL
182d10318655out1|ali|phd|phdHtm|1899612.0941,75,120,143,174MTIILAFLSFTPALVSHDLK
183d10318805out1|ali|phd|phdHtm|398838.87222,253,277,343,384MKVKRKAGLITLAFLIAFIT
184d10307484in6|ali|phd|phdHtm|13790-16.5939,70,97,119MRIFKLSPDEEERFFDNLPR
185d10317124in6|ali|phd|phdHtm|18493-10.0723,62,95,165MKKLILLGILSLIIGLLEAL
186d10303434in5|ali|phd|phdHtm|100340-4.7622,269,831,854MKRKIISIIILAIVGLSLTF
187d10306464in3|ali|phd|phdHtm|33280-8.7624,148,190,250MKRIPSLIIGLLLILATWHS
188d10308144in3|ali|phd|phdHtm|26994-10.7225,58,96,156MSPVKLKILITFIGILFILG
189d10308414in3|ali|phd|phdHtm|15230-3.0125,53,110,139MGRGARIGIAIVLLLTLLVA
190d10314224in3|ali|phd|phdHtm|24713-1.05120,149,178,232MYLVKSPEILREVSENLKKA
191d10303424in2|ali|phd|phdHtm|36440-4.1091,175,331,354MSSAIKIAEEFYNDEYSDSV
192d10309994in2|ali|phd|phdHtm|14096-10.2442,85,110,133MLSSKFSNQSNPRKTLYKDR
193d10312244in2|ali|phd|phdHtm|14399-9.2927,59,105,130MVPKLILKGIWSGIISFLLL
194d10313004in2|ali|phd|phdHtm|29253-5.2638,60,166,203MSKMGLGLWIRTGILMTLLT
195d10314634in2|ali|phd|phdHtm|12978-7.0238,65,94,118MRGKELTRILDTIFDLVGWL
196d10315064in2|ali|phd|phdHtm|17452-5.6636,58,88,130MRGGVKMTEASRVSRYLYTF
197d10315534in2|ali|phd|phdHtm|12342-4.2929,55,82,117MNAKIIALLIIGGGLGALTR
198d10302254in1|ali|phd|phdHtm|17154-5.7583,111,135,164MNYEEHVLLGLGTYPLFVLL
199d10302884in1|ali|phd|phdHtm|23373-7.2635,89,175,214MDKCYFCSSCPNSWFFIDKF
200d10304834in1|ali|phd|phdHtm|13540-4.7623,47,88,122MSYLLISSPLYLFIIAETLR
201d10304894in1|ali|phd|phdHtm|18892-9.0645,67,113,174MLSKIRPKVKQPLERIGKTL
202d10308084in1|ali|phd|phdHtm|13839-3.7532,61,99,128MRGLSSLLLMIVLALLLYPL
203d10309054in1|ali|phd|phdHtm|12416-1.8233,56,83,110MCSMGAVERRLLWIGGVVAL
204d10313474in1|ali|phd|phdHtm|20126-2.9351,75,122,182MQSQPYGSTWKLKSLKKLNT
205d10313934in1|ali|phd|phdHtm|24535-3.7568,97,127,153MSLENLLYSIGLAMEKVFIK
206d10314794in1|ali|phd|phdHtm|14793-9.0731,59,93,136MSDMGVIVKTNARALIPLIG
207d10315044in1|ali|phd|phdHtm|24194-13.12125,155,190,222MGEVVSMLKRLLSIILILII
208d10318474in1|ali|phd|phdHtm|15601-0.5725,74,110,145MKREVTIVMVIYFIIGLALV
209d10318574in1|ali|phd|phdHtm|12393-17.5838,60,86,111MKEIGKKYISAISFIFLIGI
210d10318994in1|ali|phd|phdHtm|33854-5.5635,57,80,105MDKLKLYIGLFIVIILGIAG
211d10317934out242|ali|phd|phdHtm|580121.3139,79,168,267MDGSLRQLERLLSYLREYRW
212d10320504out24|ali|phd|phdHtm|162303.4826,75,113,160MKIMDPIVYVSLGMALGAGL
213d10314074out8|ali|phd|phdHtm|148030.5532,57,86,108MLYEEVVSSRLLNLILGIVL
214d10309084out6|ali|phd|phdHtm|1209910.9621,43,84,111MVKKLIIAVVVGLLMALAIN
215d10316754out5|ali|phd|phdHtm|185757.5928,88,128,177MSRNLKLFIILLGVFIFGTL
216d10318634out5|ali|phd|phdHtm|109151.2621,45,75,99MYRGLAIIFGFLFLGEIIES
217d10309764out4|ali|phd|phdHtm|202464.8844,110,132,174MSLKLELKRKALHMTGLSVP
218d10305474out3|ali|phd|phdHtm|1119114.4032,54,78,108MASTSPRDLTPSIAIFLHLL
219d10315744out3|ali|phd|phdHtm|133060.7832,71,97,126MGKTSGTSLWISLRVSELIS
220d10316114out3|ali|phd|phdHtm|159646.1238,74,123,159MLTLFTALSSFRRFSSSFRW
221d10306034out2|ali|phd|phdHtm|181626.2422,60,114,161MNFIPIVQMASMILLVIASF
222d10313684out2|ali|phd|phdHtm|190474.7142,78,116,168MSLSNAKVYGGIGAILQLIG
223d10316654out2|ali|phd|phdHtm|183424.6878,110,142,171MKFNKAMGMKYLKWSGTVGG
num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
224d10300884out1|ali|phd|phdHtm|2829211.4230,69,101,148MRIINLTYFFRDLLVFIITT
225d10301184out1|ali|phd|phdHtm|124606.6931,54,80,102MGVTYVGYQHIHHSAEIAVS
226d10301564out1|ali|phd|phdHtm|323606.3149,87,282,316MKKSTSEISVIAYSKDKFMS
227d10303994out1|ali|phd|phdHtm|327333.4945,91,113,162MRKYWDLISVIVLSLLLDLI
228d10306364out1|ali|phd|phdHtm|164070.0022,55,98,147MIRVSSSFLFKFIITLNLFI
229d10308874out1|ali|phd|phdHtm|111030.8126,48,83,105MLEIFSFMFFTGGGLVMLFI
230d10309954out1|ali|phd|phdHtm|167252.1330,77,107,151MLILYLISCTFFPFSSNILD
231d10310924out1|ali|phd|phdHtm|207111.1927,61,83,192MPFPYGVMSCIVIGTTAGIL
232d10313464out1|ali|phd|phdHtm|162343.7725,77,102,141MIVVGWGFSVSPSVLLLLFF
233d10313904out1|ali|phd|phdHtm|476000.8931,128,304,465MRRGQLLSIDALLSLVVMAF
234d10314164out1|ali|phd|phdHtm|176151.4663,87,125,154MGSTIAKQEVKQGTYSFPSL
235d10320584out1|ali|phd|phdHtm|239222.1325,60,84,196MVNLMVLSYRFIVFLLFLIL

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