--- -------------------------------------------------------------------------------- --- --- All proteins with at least 3 transmembrane helices in Pyrococcus horikoshii --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 236 d1030062 3 in 10 353 1 3 -1.91 258,289,341 MKVSIIVPTYNERDNLEELF FGIGASFVVRYIFNRHITWA 237 d1031190 3 in 4 108 2 3 -2.15 46,86,108 MLNTNVSSFIAPLSLRTNVY LACSLCQSKMWTLFTIWITK 238 d1031652 3 in 4 100 0 0 -0.34 27,56,84 MGTSKILAPFFIAFMRTSVS TKSALPSTMGFTNLYISLGL 239 d1030749 3 in 3 115 3 3 -3.49 34,66,96 MLKLSPKEKEMLMKDLPIFL TPPNLQAPNTKDQNLQRDPQ 240 d1031167 3 in 3 113 1 4 -1.84 38,69,91 MASPYPMDSSLNPISVRVFL ISNSSFTNLPKVAPLNFTGI 241 d1031641 3 in 3 118 4 6 -4.20 21,55,84 MYTIQYIAIIVILTLMIYAF ELNRKISIRLKELEDEIERK 242 d1030717 3 in 2 107 6 9 -6.45 44,73,98 MKVLTPAALAPTTAEIAECS SLTISIAFVGHSFAHIPQPL 243 d1031325 3 in 2 189 9 5 -12.58 104,152,179 MASSRSQGVFVAVSTITFLL SFFFLIFLALSSHFFASSRS 244 d1031643 3 in 2 264 7 2 -7.00 28,157,179 MLIILFLIQMILIVKALGLK DERIARIIAIVEMYRRLEFL 245 d1030151 3 in 1 104 7 4 -7.41 43,70,92 MLECFSHHARKNFNTSSGIF PSFTMSTPISNPLPLTSPII 246 d1030210 3 in 1 168 0 8 -0.93 59,99,128 MSTFTTKYLSPSFLPCKMSH NFITPITISPKNWLGVIVPT 247 d1030252 3 in 1 230 9 0 -10.62 86,108,132 MLGTMTSENILKAIDLEIKK GEDHENRGSVKGVSERIIEE 248 d1030334 3 in 1 205 9 2 -10.92 132,154,184 MYALVYHAERSQYNFTLVTR ACEKCFSDWTTECMPGYGPV 249 d1030359 3 in 1 107 5 1 -5.88 19,55,86 MLYFILNGWVYIPSNLSCKH NHEGKFITKAHMIFHHEYYI 250 d1030418 3 in 1 131 1 1 -1.44 32,86,128 MANLDLSYILFTFPLSSSIK TPLTLETFSSVYSMTIFSSI 251 d1030511 3 in 1 110 9 1 -10.78 31,74,106 MFLVSFTLSFIFSISFLNFG FEILKVLASLDNFYFRITLL 252 d1030517 3 in 1 170 4 9 -4.81 48,127,153 MTGLPPTVLRIEGSTSIVSR SSTLPALGLPSFTLSSGGSI 253 d1030706 3 in 1 309 9 1 -14.00 21,124,146 MKKVSVIIFIVIMLGIGCLN AFWISIKLEGDDLIVRLFLG 254 d1030739 3 in 1 170 0 1 -0.43 39,61,98 MLTPKTPAGYRRSIASFFTS QLNNQRLEKKDEESIKTYPL 255 d1030906 3 in 1 161 6 2 -6.56 22,44,111 MKSPNISPITAIIFLHEGLV GNGSKLGIHLISPHYNTSYL 256 d1031081 3 in 1 170 4 0 -4.65 62,94,137 MLLSSIRCPFLPISAMNHPH IGNFSLHLAFNKLIHTYLVT 257 d1031150 3 in 1 151 4 0 -4.38 88,112,141 MKMLFRGRYLVKLLEIEEPC IILMDIGKALQYFLIGYVKA 258 d1031210 3 in 1 257 2 1 -2.06 23,172,231 MKKDLTIIVGVVLVFSIFIA EEYRMPAPPCYYITLPGVEK 259 d1031242 3 in 1 117 4 9 -4.25 27,50,82 MRSKSLIQLIIFLLIVGLWF QNLVLLLTIVGGIFIDYGME 260 d1031262 3 in 1 423 6 4 -6.01 282,345,409 MKAVILAAGYGTRMGEKPKG WSTLRVIITIYLVRTTLFHE 261 d1031312 3 in 1 113 9 6 -11.06 30,61,83 MSIFSGRGSRCFMFILLLLT GDHFDVFIIKSYMDKSLMSI 262 d1031370 3 in 1 337 8 1 -8.37 118,237,333 MQEYKELIKECAKELEGLMP LYSVIIMLGIFILKRREWWI 263 d1031381 3 in 1 155 9 6 -9.57 36,79,133 MIVSSNSLSTFLILASFRRA MSSSFSSNSTPLMSLIALSL 264 d1031425 3 in 1 107 9 9 -9.44 25,47,92 MNPENKMMLIAYGIFTIAGI IINYQAVPYYNGTLYYNVSK 265 d1031544 3 in 1 369 0 3 -0.72 31,287,357 MVNCMPRYIGLKVGVIEFLF LSLSVFLVVAYERIKARRMG 266 d1031734 3 in 1 259 2 4 -2.62 21,85,117 MITIITLLLVVLISAIIVRI EAMEMAKARRVQEEREAGIS 267 d1031780 3 in 1 122 0 9 -0.12 32,61,104 MLLSFASFTANLAILSAPFL RSSSLIGTPYFLKTLKPPSN 268 d1031794 3 in 1 237 6 0 -6.62 40,68,208 MYLLTFILIRINKYSDKAKK VDEKALDEKYYTLLLNEFEP 269 d1031994 3 in 1 124 2 5 -2.08 45,76,99 MCRSPLMASCSKYISPFMAK GLSLSPFPAASITAFMTLPP 270 d1031849 3 out 5 103 1 0 1.09 38,74,96 MLRIATYSLLLNGILLLAYY LLILHDIIGYAQRKYGKEVN 271 d1031160 3 out 4 247 6 0 6.36 24,63,104 MKFSLTLLSFEIINVLTIVS AIVSLVERIKQEHTGLKLKG 272 d1031503 3 out 4 114 9 9 16.69 22,45,94 MISAYYFGAISLVLIGLYAV AIILYEKYRTLNIEEIRRLR 273 d1031809 3 out 3 175 9 6 16.47 40,127,168 MLEGIYLALDKMFGPMLRNT GWYFLTSYVVGTILRKVLDM 274 d1031819 3 out 3 126 2 0 2.94 32,61,112 MLGDLGLPLSLSLILLSIPL SFFINPLNYYFLTLDLHGDP 275 d1030098 3 out 2 135 6 2 6.65 28,80,120 MRGATTLTLFIVAYSKALLT ILSSFEKNSATLFITLSSLL 276 d1030907 3 out 2 165 3 9 3.76 69,111,155 MFTTSIVLGFFSALTHDYSA LIFIAALIESTVTVKIAESL 277 d1031146 3 out 2 143 9 2 11.08 34,71,111 MMNPLESQFIAPADFLVMLL WDELLHYAMSKLTLKLIREP 278 d1031246 3 out 2 111 0 9 0.90 37,83,107 MMTRGTLRNSLIFLAPTRNI VLIPQSQNFNAIFLFSLSFA 279 d1030227 3 out 1 114 8 2 8.97 35,66,88 MAMMNNPIILIVTLSAVLLI ASNPILNNTNPPATLRASNS 280 d1030262 3 out 1 153 8 7 8.47 37,67,116 MFSLFSMLLTSTPSLTFSSR MIRSRGKGIKNSNVKVFVVR 281 d1030267 3 out 1 139 3 6 3.25 54,107,132 MLPRINAIIRYPTPNLFVIL SRFNFETIFLNICSIIGTSE 282 d1030362 3 out 1 114 6 6 6.49 26,74,113 MASIMWIMTSALTISLISSL DLPTFSAPIIATFIIISPTS 283 d1030402 3 out 1 330 1 2 1.51 26,170,292 MRRALYVILVIFGITFLITP KLAKEGYDRKILERIVREVG 284 d1030552 3 out 1 226 7 0 7.61 94,150,182 MRESPVANLWEKTKFGESIL LDGFEGRVNLKALKNHEDFV 285 d1030557 3 out 1 103 0 1 0.96 27,70,92 MEPNLSKTFSFITIKALFCF AAITIGLFTLLISDAKANRS 286 d1030767 3 out 1 150 4 8 4.08 36,65,89 MNIGLSLTRIISVVLSNSAT CPRSYNPKRLNFICDFYESI 287 d1030982 3 out 1 127 9 6 19.95 54,85,120 MKMSLIARTTSKLVAPFLVT IKVGAAFVLIFYSLIAFLER 288 d1031035 3 out 1 284 7 3 7.04 29,140,190 MMNFIKKVGVSIMFLTLFLS KLYKVGRENWVELAIDMQRY 289 d1031157 3 out 1 116 9 0 21.81 57,79,112 MSEIVLFFFSIHSLGDDMDF IGILPGSAAFIAGFYLGFRK 290 d1031227 3 out 1 129 4 8 4.93 46,97,119 MDLEIKYIAKEPSFLLTALI RSSIVIPSKFSKLLQTLFLI 291 d1031240 3 out 1 240 3 1 3.88 39,69,166 MIFFTSEFLIGVSSMNSCND IKWTVSWNCTESPSRTFKVK 292 d1031249 3 out 1 170 9 3 13.99 24,59,95 MKAEIRAIAIAITYILTATK PKDEKASSKSSCKGPPTANT 293 d1031250 3 out 1 103 9 1 20.83 38,62,85 MAILDDPTPIIIGPGPVPFI FCSRIYLKSFKVGTYEADKL 294 d1031268 3 out 1 173 3 7 3.52 43,72,121 MESSSREEEKDPDEGERVLN VPRFIPNLFEVIKKLDPGER 295 d1031373 3 out 1 125 3 9 3.35 43,84,113 MAILQPLPLLNFFLNSRISS ISFITLSVIPFFPIQALGSI 296 d1031476 3 out 1 167 9 5 9.66 20,47,79 MSFITAFIWSYFMWLILTAG WPESSEPVSGPFEKWARRLG 297 d1031495 3 out 1 114 0 1 0.50 46,69,98 MLATLAFPSSILGPINSTPS TCSINPVISVITGLPVANSI 298 d1031550 3 out 1 102 9 9 9.71 44,70,93 MFAHFLPIPGSLISSSNLSG SSLFLWEIIHLIRVLYGSPE 299 d1031605 3 out 1 111 2 5 2.57 55,84,111 MLLLSGPGFFLSSTLKGAIL LSPSGFSIIIIHLSFLLWFL 300 d1031616 3 out 1 130 6 9 6.36 35,98,120 MGIPSVLLISLGVFPLLSIS TFLPFISTLITLTLEEAQGT 301 d1031631 3 out 1 119 9 2 21.08 36,58,110 MHTSAPLGTLSSLATAGHLA PAMYTSAFEISLIFSIRIAS 302 d1031713 3 out 1 159 9 8 14.88 59,121,155 MEEDEGMKFVEILLLSLVPT LIGGLLSVMITAFPAIGYLK 303 d1031914 3 out 1 264 2 1 2.63 44,78,204 MYQEFFTFIPVDIEELDKAF TATGTGSHALDFRKIENKRD 304 d1031933 3 out 1 392 9 0 18.86 134,163,305 MRKMKRFYIASEEEIKTGKT PKARDIREYVLEQAKKFNLE 305 d1031996 3 out 1 148 7 2 7.48 56,96,118 MTVISYASVWPNEAVWPYPT DVNSKICKAFHFSWLFYYLF 306 d1031999 3 out 1 174 7 2 7.79 45,82,150 MFPKLMNLLIPTSCLAAQSR IFPLKLFTRDLNIPFPTFPG 307 d1032043 3 out 1 107 1 7 1.07 19,61,96 MFLVLISISLLGLTPMAISF SILVGFILRISGISCHLVKW