--- -------------------------------------------------------------------------------- --- --- All proteins with at least 2 transmembrane helices in Pyrococcus horikoshii --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 15 d1030337 2 in 27 177 9 2 -11.26 87,138 MVISMKSEKPLVGIIMGSDS RKVEEKAKRLEEMGWERYLS 16 d1030067 2 in 11 230 3 3 -3.56 52,202 MLSERELERYDRQIMLFGVE PLLNKLLLVDLANNIFEIVE 17 d1030736 2 in 10 364 1 0 -1.35 72,278 MEIRYTPKELTKLPRTVEYK PFKRNLKKLFEVNKSGGDEA 18 d1030718 2 in 8 398 5 0 -5.30 90,113 MFFMPIRTVMKANEAAAWAA ALEKGEVEKPIHWIGLRKEL 19 d1030622 2 in 7 154 3 1 -3.70 32,149 MDEKGKEVISTLLIILLTLA AVFPRIGIISIKVRELLGFG 20 d1031232 2 in 7 270 9 0 -10.38 26,259 MKRYGLPILVVILLLGIPQA ITGLIGFLLYRDKRSWEYGG 21 d1031446 2 in 4 342 6 2 -6.42 267,334 MKAKDIVLKKSEKIEGVEVK TLIFPILVWMVMKARGQGYA 22 d1030324 2 in 3 215 0 0 -0.61 36,189 MSKGLTAAATSNSPFSSLTA TSTSFGSTSVACGIKSTSSN 23 d1030643 2 in 2 252 4 1 -4.41 133,166 MGGTMIIVFVGTAGSGKTSL EGFEDLETLAYEHYCTCGDL 24 d1031729 2 in 2 367 9 1 -17.41 23,95 MRRLLGIFVALVVAFSIAAI IHRELWRDIRELHKAKHKTR 25 d1032027 2 in 2 177 9 2 -17.60 27,139 MGIKDAVRYPTILFGLLLLF RRKERLGGEDVQRTPWREGR 26 d1030163 2 in 1 340 9 0 -9.14 22,117 MRKVIPILGILLLSFIILGC SPPVAFGNVPPEIRRLVEVK 27 d1030317 2 in 1 128 8 5 -8.90 66,103 MTSYRGFTFLMNFPCCGSMG YSSLFSEYPLIPRFMWRHSI 28 d1030623 2 in 1 185 9 1 -14.76 42,176 MMLTIGLYNTYDPKRIHEAH IIPAKIATVMEALKWMKRER 29 d1030766 2 in 1 104 0 0 -0.83 63,101 MAHFNHHYYFPKLLHCHYAI HRNVILNTFSYFNGPFSFIN 30 d1031012 2 in 1 299 9 2 -15.18 26,296 MCKRFPSPLLVPILLFSLMF ICGPGFVLVLLLLFLMLKEC 31 d1031715 2 in 1 185 9 3 -9.23 33,148 MGRLRREILIGGFGGQGVIL GTEQINLKALYKGFELAEKY 32 d1031720 2 in 1 284 5 3 -5.50 71,132 MMPKIYSKYPMVKYLRKEAL FVTELNKLIDEVQERFGLKE 33 d1031765 2 in 1 367 6 0 -6.16 31,266 MENVEEIRMKKFLAFTMALL TGENIEIYGAYELQDIKLEE 34 d1030862 2 out 7 105 6 9 6.42 29,84 MVSAKSGMWTAILGGLLILL FWTIGAWISLIGGAMIAYGT 35 d1030036 2 out 2 426 0 0 0.38 25,152 MRSGLKVLIAALIGMAVVVS VLNELGPKLHQLFKEQGVEE 36 d1031541 2 out 2 143 4 4 4.60 67,135 MLKRFLIPAEYSTIGLFNAD TFPIFLCTSSNWPIILPPSK 37 d1031905 2 out 2 141 5 6 5.28 48,88 MALSMTSLNFPSFLSPSRIL IDGAFSSASLNTSLNLSSLS 38 d1030240 2 out 1 301 6 3 7.00 104,228 MLSAAGVNVSFKGELDDGFE KMVEAFGNHKDILFRIINGE 39 d1030350 2 out 1 399 9 2 16.00 21,274 MKNLSLLIFIFLIALTPAVS KVCGPGFLLLLLLLGKKIKK 40 d1030416 2 out 1 334 0 0 0.29 46,116 MILMKSYYRLLGHYYLLLRF EFRLCVHSDLGNMAIVSLKK 41 d1030528 2 out 1 126 1 1 1.20 51,126 MGPEAMASRLSPTTSEIIST DFSSGIGCPASITFILFNSF 42 d1030608 2 out 1 138 9 0 28.80 95,117 MLKIAEAVEKKIIKENRAPA IPLSSSSSSPLRTIKIQLMP 43 d1030723 2 out 1 111 9 2 20.32 26,67 MPGSMYVEFIISPIALTVPL LFTFLLQFLLWHALNNPPQR 44 d1030781 2 out 1 107 5 5 5.59 31,74 MYMFLAISSHFSTSSSLMFN AVSKIISRPHLFINSRSPET 45 d1030945 2 out 1 370 4 1 4.91 25,366 MDELDIKFAVFVVIFILIGA EAYLRLLGMVMALEIFSSYF 46 d1030958 2 out 1 237 2 2 2.25 40,117 MKPSGIIALRALPQSKMRIA VEVKGKLSVAKLDGEVIVLA 47 d1031230 2 out 1 128 3 3 3.52 58,121 MAFATCLARFMYAALHASLD RMAIGYPFILGSLPSNHTMT 48 d1031236 2 out 1 114 3 5 3.88 22,48 MLGRIAVTLVAYLLCIFYFQ SFSVAAILGALALKGGRANG 49 d1031351 2 out 1 276 1 1 1.95 78,153 MEKDITDSTRGESMNLEELY VSTVLYFRKPRKKVADEILR 50 d1031387 2 out 1 202 2 0 2.54 30,111 MEKMRKGQISIEFLFLITVL NPDLSTSWSYNSGELKIVIG 51 d1031483 2 out 1 118 2 3 2.89 27,118 MVKLFGYWDALYFILVFTIG DYVSYLLITTAFILVVLLVR 52 d1031524 2 out 1 267 8 0 8.01 75,107 MKVGVSIYPHFIKEGKTLPS KDPKVFANLPPKSELIERLR 53 d1031575 2 out 1 455 9 0 13.00 151,317 MSVYEEYMENLKGWRVRKAL LEPEIKKSVSMKLLDTAIGQ 54 d1031754 2 out 1 114 0 5 0.45 84,113 MNVSSINFSAFFSAPAVPSF PPANNTACIVTPRVFITFIR