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Transmembrane helices for pyrho (Pyrococcus horikoshii)
Jinfeng Liu & Burkhard Rost
CUBIC Columbia Univ, Dept Biochem & Mol Biophysics
| num | id | nhtm | top | nali | ali|phd|phdHtm | len1 | riTop | riMod | topD | htmCN | seqN |
| 308 | d1031867 | 2 | in | 25 | |ali|phd|phdHtm| | 341 | 6 | 3 | -6.69 | 236,328 | MIGVVQIPMGVAGPLKINGE |
| 309 | d1030541 | 2 | in | 13 | |ali|phd|phdHtm| | 325 | 2 | 3 | -2.35 | 151,305 | MKTLIEIKQTPDGIIKADKV |
| 310 | d1030522 | 2 | in | 9 | |ali|phd|phdHtm| | 739 | 9 | 1 | -12.38 | 31,328 | MQFKKKIILIMILAAVVSTA |
| 311 | d1030485 | 2 | in | 6 | |ali|phd|phdHtm| | 314 | 9 | 6 | -16.20 | 254,299 | MSIIIPAYNEEENIKRAIKA |
| 312 | d1030840 | 2 | in | 6 | |ali|phd|phdHtm| | 275 | 9 | 0 | -15.30 | 135,188 | MRRIIALLLLTLFASFAYAE |
| 313 | d1031915 | 2 | in | 5 | |ali|phd|phdHtm| | 160 | 8 | 6 | -8.48 | 85,150 | MNYSEGVSTDQIFNHLKAKG |
| 314 | d1030502 | 2 | in | 4 | |ali|phd|phdHtm| | 143 | 9 | 9 | -9.52 | 35,66 | MSMGIAFPLSLLILGLLIIL |
| 315 | d1031275 | 2 | in | 4 | |ali|phd|phdHtm| | 149 | 1 | 4 | -1.15 | 48,70 | MEVVIQDYHTRYTSKMSSFS |
| 316 | d1031478 | 2 | in | 4 | |ali|phd|phdHtm| | 64 | 8 | 9 | -8.91 | 33,55 | MITLRDLLGAAIASAAMSLL |
| 317 | d1030984 | 2 | in | 3 | |ali|phd|phdHtm| | 103 | 6 | 9 | -6.26 | 27,74 | MLELLPLLFGYLIMFFGALG |
| 318 | d1031555 | 2 | in | 3 | |ali|phd|phdHtm| | 107 | 8 | 8 | -8.34 | 51,74 | MVKLFSINFNKTKPYFFDFH |
| 319 | d1031872 | 2 | in | 3 | |ali|phd|phdHtm| | 158 | 9 | 2 | -17.32 | 124,146 | MMEDILKPEYIAFIIKEREK |
| 320 | d1030284 | 2 | in | 2 | |ali|phd|phdHtm| | 121 | 4 | 9 | -4.98 | 79,114 | MKFKFLYFSLSFITYSTVSG |
| 321 | d1030505 | 2 | in | 2 | |ali|phd|phdHtm| | 159 | 9 | 1 | -9.02 | 48,70 | MNAEYIISNVTAVFLPILLF |
| 322 | d1030809 | 2 | in | 2 | |ali|phd|phdHtm| | 410 | 6 | 0 | -6.28 | 37,278 | MKATGKAYSLLTIIWIIVIS |
| 323 | d1031298 | 2 | in | 2 | |ali|phd|phdHtm| | 101 | 9 | 5 | -14.19 | 56,78 | MTVMNSKDYHRISILKKRII |
| 324 | d1030052 | 2 | in | 1 | |ali|phd|phdHtm| | 140 | 9 | 8 | -15.38 | 117,139 | MFPPPGVYSGEGLAGRASYY |
| 325 | d1030153 | 2 | in | 1 | |ali|phd|phdHtm| | 118 | 0 | 7 | -0.71 | 54,88 | MVTGFPKGLSFMLTYFSTGS |
| 326 | d1030293 | 2 | in | 1 | |ali|phd|phdHtm| | 114 | 8 | 9 | -8.82 | 73,95 | MAGVFEKTSIFLASTILNDS |
| 327 | d1030315 | 2 | in | 1 | |ali|phd|phdHtm| | 108 | 8 | 3 | -8.33 | 71,95 | MLFYKLSLSPSDRGAFIISQ |
| 328 | d1030348 | 2 | in | 1 | |ali|phd|phdHtm| | 406 | 1 | 0 | -1.79 | 38,164 | MEDMKGASFFVTLFLWFIVM |
| 329 | d1030360 | 2 | in | 1 | |ali|phd|phdHtm| | 170 | 7 | 6 | -7.67 | 82,161 | MKMNQLLEAFWYILPAYFAN |
| 330 | d1030477 | 2 | in | 1 | |ali|phd|phdHtm| | 211 | 9 | 2 | -25.44 | 135,166 | MEGKSLWRHSDKIQAPGEGK |
| 331 | d1030481 | 2 | in | 1 | |ali|phd|phdHtm| | 1127 | 9 | 1 | -26.00 | 142,164 | MLSGESEMDEERMDLGIEFE |
| 332 | d1030537 | 2 | in | 1 | |ali|phd|phdHtm| | 123 | 9 | 5 | -10.53 | 37,66 | MLNLSFKSFSTSFLSCIPCS |
| 333 | d1030593 | 2 | in | 1 | |ali|phd|phdHtm| | 309 | 9 | 3 | -16.73 | 30,236 | MLRIKDKRMQYAFIGLFLIF |
| 334 | d1030686 | 2 | in | 1 | |ali|phd|phdHtm| | 139 | 1 | 5 | -1.18 | 69,132 | MSFALFLEWCRGIDLANLAR |
| 335 | d1030837 | 2 | in | 1 | |ali|phd|phdHtm| | 109 | 2 | 8 | -2.18 | 44,77 | MCPPLAKIVSILSPMLTSYA |
| 336 | d1030986 | 2 | in | 1 | |ali|phd|phdHtm| | 201 | 9 | 9 | -10.97 | 62,105 | MTRIHLYLRKRVEEVKERYR |
| 337 | d1031162 | 2 | in | 1 | |ali|phd|phdHtm| | 397 | 9 | 0 | -10.31 | 186,217 | MIEDNMKLKTGIPALDRILG |
| 338 | d1031309 | 2 | in | 1 | |ali|phd|phdHtm| | 154 | 2 | 2 | -2.52 | 65,106 | MRIVFHSFKNETRFTDSPSS |
| 339 | d1031327 | 2 | in | 1 | |ali|phd|phdHtm| | 189 | 4 | 1 | -4.28 | 51,91 | MSLGIWAWDNPSPSPSCIFL |
| 340 | d1031382 | 2 | in | 1 | |ali|phd|phdHtm| | 706 | 9 | 0 | -10.14 | 29,659 | MGVEIAMRKASILLTILLLT |
| 341 | d1031386 | 2 | in | 1 | |ali|phd|phdHtm| | 197 | 9 | 3 | -19.14 | 119,141 | MKVKDSVEVALELNEKDLYS |
| 342 | d1031449 | 2 | in | 1 | |ali|phd|phdHtm| | 298 | 4 | 2 | -4.08 | 209,250 | MNKLERLLEDLKLRLPEREI |
| 343 | d1031482 | 2 | in | 1 | |ali|phd|phdHtm| | 143 | 4 | 8 | -4.59 | 80,112 | MILSLICHGNIPIRIIAITK |
| 344 | d1031586 | 2 | in | 1 | |ali|phd|phdHtm| | 133 | 9 | 7 | -15.21 | 44,123 | MKFTLHKGNFTCGSLETCSF |
| 345 | d1031666 | 2 | in | 1 | |ali|phd|phdHtm| | 325 | 9 | 3 | -11.33 | 152,320 | MKRTMVPFLLVLFLASVVKA |
| 346 | d1031683 | 2 | in | 1 | |ali|phd|phdHtm| | 102 | 8 | 2 | -8.62 | 65,91 | MQKPEVSLRATFISSILGGL |
| 347 | d1031990 | 2 | in | 1 | |ali|phd|phdHtm| | 77 | 0 | 9 | -0.36 | 47,71 | MFGSSLISSRIAIASAALTA |
| 348 | d1032037 | 2 | in | 1 | |ali|phd|phdHtm| | 130 | 1 | 8 | -1.96 | 69,107 | MYFLASIAAFNSSLMLSALS |
| 349 | d1030472 | 2 | out | 27 | |ali|phd|phdHtm| | 428 | 1 | 0 | 1.95 | 46,254 | MKVSVITPILPFLFTIVPAA |
| 350 | d1030983 | 2 | out | 9 | |ali|phd|phdHtm| | 162 | 1 | 5 | 1.39 | 53,137 | MLGIILEVVMLTLALIVILH |
| 351 | d1031138 | 2 | out | 5 | |ali|phd|phdHtm| | 143 | 1 | 9 | 1.57 | 64,108 | MSLYIIFPTNIGTSLAFATS |
| 352 | d1030076 | 2 | out | 3 | |ali|phd|phdHtm| | 102 | 0 | 9 | 0.47 | 63,93 | MLNPSLDIISLMAYLTSSSL |
| 353 | d1030297 | 2 | out | 2 | |ali|phd|phdHtm| | 280 | 9 | 2 | 19.63 | 25,141 | MDPLSGFLGSLIWWFLFLYL |
| 354 | d1030527 | 2 | out | 2 | |ali|phd|phdHtm| | 154 | 4 | 0 | 4.72 | 54,152 | MTIAITIELTFVPVGPVNSK |
| 355 | d1030850 | 2 | out | 2 | |ali|phd|phdHtm| | 199 | 3 | 1 | 3.65 | 75,128 | MNENESFVRVFDKELIALSN |
| 356 | d1031239 | 2 | out | 2 | |ali|phd|phdHtm| | 743 | 9 | 1 | 21.88 | 714,736 | MWLFSIFKKKQDSKGIKEKE |
| 357 | d1031244 | 2 | out | 2 | |ali|phd|phdHtm| | 108 | 5 | 9 | 5.07 | 61,90 | MSLTPENIRTLRRSSALKSH |
| 358 | d1031426 | 2 | out | 2 | |ali|phd|phdHtm| | 304 | 6 | 1 | 6.97 | 70,155 | MRILRFGPVICMLEGGYDVI |
| 359 | d1031542 | 2 | out | 2 | |ali|phd|phdHtm| | 145 | 9 | 2 | 12.88 | 115,137 | MKVFRLILMVVTLVIAESFF |
| 360 | d1031740 | 2 | out | 2 | |ali|phd|phdHtm| | 281 | 9 | 2 | 10.98 | 31,254 | MLRGEAFMIDIRDVIGTIII |
| 361 | d1030051 | 2 | out | 1 | |ali|phd|phdHtm| | 144 | 2 | 5 | 2.50 | 54,89 | MYLSTSIIWGTFSMTNTLGF |
| 362 | d1030122 | 2 | out | 1 | |ali|phd|phdHtm| | 167 | 9 | 4 | 10.43 | 125,163 | MYFLLTLPFLSSLTAWAILT |
| 363 | d1030272 | 2 | out | 1 | |ali|phd|phdHtm| | 104 | 6 | 9 | 6.31 | 19,54 | MLIIFLFLITVRVISSLGLV |
| 364 | d1030344 | 2 | out | 1 | |ali|phd|phdHtm| | 104 | 3 | 9 | 3.50 | 37,69 | MLPYPPLVMVRFLGTITTEG |
| 365 | d1030405 | 2 | out | 1 | |ali|phd|phdHtm| | 422 | 9 | 1 | 13.13 | 39,257 | MKREDALLTLIGVDLLYGYL |
| 366 | d1030452 | 2 | out | 1 | |ali|phd|phdHtm| | 389 | 9 | 0 | 10.00 | 149,177 | MEVEPMREFYFYGYPTQLSI |
| 367 | d1030457 | 2 | out | 1 | |ali|phd|phdHtm| | 105 | 5 | 9 | 5.75 | 51,95 | MGTVIMMKSHFLRSSGSFVG |
| 368 | d1030506 | 2 | out | 1 | |ali|phd|phdHtm| | 140 | 2 | 9 | 2.21 | 72,124 | MAEIARIRAIFARALPTAFP |
| 369 | d1030555 | 2 | out | 1 | |ali|phd|phdHtm| | 325 | 8 | 0 | 8.57 | 20,318 | MKKILTFVVIILLFAQPVIS |
| 370 | d1030561 | 2 | out | 1 | |ali|phd|phdHtm| | 174 | 9 | 0 | 18.42 | 132,161 | MSSQSRASQCAFLPLRGESG |
| 371 | d1030619 | 2 | out | 1 | |ali|phd|phdHtm| | 393 | 3 | 3 | 3.29 | 200,272 | MVEMMESYYDTIPNFRYWDI |
| 372 | d1030639 | 2 | out | 1 | |ali|phd|phdHtm| | 120 | 9 | 9 | 10.41 | 34,83 | MYFLSNSCGIFGVTTSLSPL |
| 373 | d1030792 | 2 | out | 1 | |ali|phd|phdHtm| | 104 | 3 | 9 | 3.71 | 65,102 | MFLSILAGVSNTISLFSRKW |
| 374 | d1030974 | 2 | out | 1 | |ali|phd|phdHtm| | 69 | 9 | 8 | 30.60 | 40,62 | MIGFMLVFLGTLISAFGQPQ |
| 375 | d1031031 | 2 | out | 1 | |ali|phd|phdHtm| | 112 | 0 | 0 | 0.53 | 43,66 | MQSTSLLKEFSQLSQHSPSP |
| 376 | d1031034 | 2 | out | 1 | |ali|phd|phdHtm| | 107 | 2 | 8 | 2.75 | 28,88 | MKYIICSSVTFLKSISAFLT |
| 377 | d1031110 | 2 | out | 1 | |ali|phd|phdHtm| | 158 | 5 | 7 | 5.63 | 72,107 | MLFSSFLNSFSLSKMSSLLS |
| 378 | d1031122 | 2 | out | 1 | |ali|phd|phdHtm| | 158 | 1 | 2 | 1.93 | 69,143 | MTNKSLKVSSTCKGEGESME |
| 379 | d1031124 | 2 | out | 1 | |ali|phd|phdHtm| | 105 | 9 | 9 | 18.16 | 53,99 | MLSSIKGLNISSNGARNSMF |
| 380 | d1031126 | 2 | out | 1 | |ali|phd|phdHtm| | 116 | 9 | 8 | 17.76 | 51,73 | MFGCGISFPTLTSTLTRSPS |
| 381 | d1031201 | 2 | out | 1 | |ali|phd|phdHtm| | 165 | 4 | 4 | 4.17 | 117,154 | MVLNSLAAFIVNFLASSSPY |
| 382 | d1031303 | 2 | out | 1 | |ali|phd|phdHtm| | 141 | 9 | 5 | 10.00 | 43,137 | MLTTVFGIPNSLNPIPFTVI |
| 383 | d1031466 | 2 | out | 1 | |ali|phd|phdHtm| | 101 | 4 | 8 | 4.03 | 45,67 | MACSRNLEAYFGRFIMILSA |
| 384 | d1031477 | 2 | out | 1 | |ali|phd|phdHtm| | 121 | 2 | 8 | 2.38 | 58,91 | MIEYLILTCLAISVTFNMLG |
| 385 | d1031507 | 2 | out | 1 | |ali|phd|phdHtm| | 119 | 0 | 7 | 0.77 | 59,112 | MPSGHFLVIHTLPSFSQTTA |
| 386 | d1031573 | 2 | out | 1 | |ali|phd|phdHtm| | 465 | 5 | 0 | 5.00 | 157,351 | MGSSFSIINLTQLREDLKRW |
| 387 | d1031578 | 2 | out | 1 | |ali|phd|phdHtm| | 110 | 9 | 4 | 14.00 | 21,47 | MTIGSFIIISRSSIFMITSL |
| 388 | d1031602 | 2 | out | 1 | |ali|phd|phdHtm| | 206 | 9 | 6 | 16.30 | 32,65 | MYMDHFPTFGGYIFSMATYY |
| 389 | d1031679 | 2 | out | 1 | |ali|phd|phdHtm| | 112 | 4 | 3 | 4.00 | 84,112 | MTKAPSSMNNYELLLREKSR |
| 390 | d1031725 | 2 | out | 1 | |ali|phd|phdHtm| | 102 | 9 | 9 | 9.87 | 43,88 | MPTNRIGAFITWLILKAAPP |
| 391 | d1031766 | 2 | out | 1 | |ali|phd|phdHtm| | 101 | 5 | 9 | 5.94 | 66,88 | MFSPVFGSLDENHPSTLRGI |
| 392 | d1031897 | 2 | out | 1 | |ali|phd|phdHtm| | 111 | 2 | 8 | 2.78 | 36,81 | MAPPSIMISLASFVSPLTIF |
| 393 | d1031926 | 2 | out | 1 | |ali|phd|phdHtm| | 112 | 3 | 8 | 3.92 | 36,96 | MHILYFLFPKVTFNSFSTPI |
| 394 | d1031955 | 2 | out | 1 | |ali|phd|phdHtm| | 116 | 9 | 2 | 13.07 | 42,69 | MKEMNIAVRNIIRGIIPPGT |
| 395 | d1031978 | 2 | out | 1 | |ali|phd|phdHtm| | 113 | 8 | 2 | 8.28 | 41,93 | MRILVTVGISNSSSVSKNSL |
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