--- -------------------------------------------------------------------------------- --- --- All proteins with at least 4 transmembrane helices in Pyrococcus abyssi --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 137 cab49851_1 6 in 19 306 9 3 -11.23 36,123,163,185,235,288 MSLKSTLKIALKNKKFKVGF TGLYFINTGLDEVFNPRLRG 138 cab49068_1 6 in 18 287 9 3 -14.05 44,109,149,171,222,271 MRRKVKKGESMWHLTWLRFK VLGFNFVGDGLRDAIQPEKV 139 cab49658_1 6 in 16 387 9 3 -13.41 74,160,193,247,302,352 MQEEYKKSILDKIADKLVYG RRSIEFKVKKQKKMEEGEES 140 cab50444_1 6 in 16 309 9 4 -11.79 37,127,161,184,239,292 MKGKADILRLAFRNNKFKFG TALFFVNLGMEEVFNPRLRG 141 cab49102_1 6 in 11 302 9 4 -11.61 36,100,133,188,235,289 MGEDEMKKTTIAALVLILPG VLAIYMYINVKITRLQEGAK 142 cab48949_1 6 in 9 284 7 5 -7.37 33,83,118,170,220,273 MNIKSKYIPYLLLTPAVVYL SIFLGALYVKFLKAEYLEVR 143 cab49957_1 6 in 7 304 9 5 -12.22 30,86,128,175,232,291 MKDRFKILLSPGVVIVFGLF GLTVNMAGMYMLRRWERNVK 144 cab49958_1 6 in 6 277 9 4 -14.68 42,89,120,149,199,267 MLRYNPRVIKEKASIVAVFT LLLIFLALFLPIRLSLKEVK 145 cab49593_1 6 in 4 283 3 1 -3.18 31,53,93,127,165,187 MEEELKPLIVSIIGNTVLGV KRKVESLPEVSEAFIHVDIR 146 cab49161_1 6 in 3 237 7 3 -7.71 23,59,116,180,202,236 MIAQGMSMLLMLAMPLLGYL TNFIATFVGGIIGILIFLLL 147 cab49310_1 6 in 3 199 5 5 -5.38 35,59,90,113,156,188 MDEATLQAYVPYFKAIVVII VIGGGLGYILKKRLGSSVSL 148 cab50674_1 6 in 3 507 9 1 -12.03 28,366,394,416,465,490 MNWKKILLNGRVILLTLFLI GILITRPAYGEIAKVLIGER 149 cab50585_1 6 in 2 374 9 2 -14.05 180,212,248,293,327,359 MKILVLAIDRDDDFGVKAGV LSIIISIKLREEVKKWSSAS 150 cab49114_1 6 in 1 313 7 5 -7.30 37,97,143,188,239,297 MKFDSRFRALSFFLSPMIIM GVITLKVLKFEEMIKKPRGD 151 cab49587_1 6 in 1 212 9 6 -13.39 49,94,121,150,174,201 MVWKRVFKVPGKLEVGRSLR YFYGIWLKRKLLDMSYWFEF 152 cab49621_1 6 in 1 235 9 2 -12.61 24,81,124,149,185,217 MLKRVLAIITILIIGYWLAE IKVGTELSGIIDNMLKEEVK 153 cab49692_1 6 in 1 329 9 4 -10.35 38,88,148,173,205,318 MSAIRSIASKELYVAVKTKR IVELLFPFSIAYMRFMTRDL 154 cab49737_1 6 in 1 338 9 1 -13.94 20,67,89,125,147,265 MLWEMLILFGMILPVLFVWH IIHSHPSLEERVRALEAAFP 155 cab49910_1 6 in 1 264 1 1 -1.18 75,134,164,194,218,253 MTMMVNAINSFKVAISRETK LVLAFIGMLIGLRGFKAALE 156 cab50534_1 6 in 1 272 3 5 -3.73 32,68,96,118,156,182 MIRGIKALVIVIAIYATLRF LESYDKGRKFVLYSDGKVSE 157 cab49846_1 6 out 36 689 1 1 1.27 100,122,166,329,359,672 MMPRKLKLEGLDCASCAYEI AVFADVGVALIAVFNAMRVL 158 cab50210_1 6 out 11 201 7 3 7.83 29,73,95,133,159,191 MLEVLKTFAVLYVGLFAITN LILTSMAIQMIINGIKGAFG 159 cab49124_1 6 out 9 202 6 4 6.92 24,62,85,130,155,190 MLQEILSSALLMLIMIDPSD IGAQMMISGAGGIVLSILKE 160 cab50084_1 6 out 5 245 9 2 15.32 50,88,150,190,212,244 MLTFVLLGFTVGFLVGLTGI KIMNVLILVIGILILLRRFF 161 cab50279_1 6 out 2 196 3 0 3.22 18,43,86,108,135,188 MKFTVIILLALSLGFILGKL GFLLSLLVPILVPTLASMGG 162 cab49053_1 6 out 1 248 3 2 3.73 57,79,108,149,193,241 MMYSLYVERKSLLHSLDPRV AVVFTIALLYLSLKFSLLPR 163 cab49568_1 6 out 1 319 1 2 1.17 34,63,102,128,152,174 MIPFFKEVLMGIPFLVIYVV LEGLSDKEKVMLKRALGEED 164 cab49221_1 5 in 209 580 2 9 -2.55 42,82,170,269,292 MADKSSLSLLKRFIKEALSE LLSRKGYFYKLYTSQMQEVP 165 cab50294_1 5 in 11 355 2 1 -2.62 147,169,207,315,344 MPRILDGFVRFLERLGGKTI LFGFPALSLIIIVMIKRAEP 166 cab50157_1 5 in 5 285 5 5 -5.71 111,143,197,223,264 MIVGLKQIELVNVRLIPFIL PGTGAVVLSMNGGLKLWKAL 167 cab50476_1 5 in 4 188 0 5 -0.39 42,88,140,162,187 MQGRELEDLLVSFLVLLLLF FRWNVSYWAIVFGVSFMLYY 168 cab50034_1 5 in 3 209 8 5 -8.28 29,55,83,117,171 MMKMRKTLAVFLLLLGYFLA KALFLGEVLLSILSVLLILS 169 cab50116_1 5 in 3 151 9 3 -14.46 19,44,68,102,145 MLGTMLSFMIILLALTVVLH EALILFSAALGFSLLIRGKK 170 cab49837_1 5 in 2 168 2 4 -2.61 45,67,104,137,159 MEEVRELKEVLDKVERKLIA LIVLTYSLTALVNLYKAFRV 171 cab49163_1 5 in 1 175 9 3 -19.94 22,64,91,132,168 MRIFGILGPIIALAGVVFAY ETVSILAFLIFQTLTLVVED 172 cab49468_1 5 in 1 186 8 3 -8.86 25,65,94,133,179 MRRNSTIFILLLVTFIVGTL VLLFIAALIEAFITPRLIGL 173 cab50293_1 5 in 1 308 9 4 -12.90 55,84,234,272,300 MRDLAREGPISSRFIAAIER VLIAIMAGSVFWLGTRFNIG 174 cab50368_1 5 in 1 178 1 0 -1.63 24,62,113,135,164 MKPPNIVILVVGFFSIIVSE ALYLTYFFFVELPSRIREEV 175 cab50553_1 5 in 1 651 0 2 -0.18 30,69,122,157,190 MKYRSFGIIPFLAFFGWGLL EIVEWEVEDNMSRLIAEVVL 176 cab50194_1 5 out 21 143 6 0 6.75 25,50,78,110,133 MKLNLSLKGPSLIIFLVLAV LGAIIFALFLYAFIRSSLLT 177 cab50363_1 5 out 6 378 2 1 2.77 157,249,280,334,367 MRGFCMGVEVSVILPTMNEE SIQLIFFSFFISFLMLKDNS 178 cab50530_1 5 out 6 346 7 2 7.09 40,87,109,150,179 MVEMLQTTIIEGIKNQTMIV IEIPFPQQVNWFADELKVKL 179 cab49225_1 5 out 4 242 6 1 6.17 24,55,77,199,221 MNISEAIVFLGLLYFLVSLL VDQKALETKYYNMLLNEFEP 180 cab49527_1 5 out 4 366 1 2 1.73 46,85,126,168,197 MFELINVVTRGLMWILSFYR SVIARELERLSELKATEQGK 181 cab48970_1 5 out 3 290 0 1 0.60 70,92,164,213,287 MNPLILLGLALIWDLLLGEP VVAEYLSIVFVLKVVQLCLN 182 cab49079_1 5 out 3 163 3 7 3.73 37,63,98,129,153 MKAKEVSLVALFTALTAVGA PDIVKILVAIAIVNRLNIRR 183 cab50169_1 5 out 3 169 9 2 13.88 24,52,104,126,155 MGAGARIAIAMVLIFAIIMT AILGIVFGGSKKVVIKTESK 184 cab49234_1 5 out 2 481 9 0 10.52 55,142,292,375,442 MDIVRIKEHPILNFESKRGR SGPFGKHIVEGIRKLLSEVS 185 cab49416_1 5 out 2 259 9 0 11.12 21,55,90,114,155 MIPILTFLLIVLISAIIVRI EAMEMAKARRMQEEREAGIG 186 cab49827_1 5 out 2 205 1 4 1.76 35,64,131,153,198 MNKLDLKEYKWDLLSLYFIL GIIAVFLIILIANTKFVVVR 187 cab49970_1 5 out 2 194 8 0 8.99 31,69,91,128,161 MELQLIIGYSLLLAFFFMKA IALLLFLGVKKVKKRPSLLR 188 cab49084_1 5 out 1 179 7 0 7.46 53,94,121,143,176 MDGYFNKATNIKIERHIWKR ISKSIYLLLLTLILFLAKCC 189 cab49123_1 5 out 1 170 9 3 10.42 39,84,108,140,163 MNYEEHVLLGLATYPLFVAF GLASFSGYTLHLIADRSVKL 190 cab49155_1 5 out 1 189 9 5 18.86 27,56,94,128,179 MSRAKIIAFTSVMVALSLIF TIQTGVDIFIAAPVVKRFRA 191 cab49357_1 5 out 1 302 3 3 3.11 41,78,113,157,203 MNEEKRTLASGSKELLFIGA VITRSGTYTFNIQDLLRGSQ 192 cab49417_1 5 out 1 481 1 0 1.89 110,140,319,416,472 MCEYTYSNGKKCRRKPLKGS AIFGMFMWAVFLTVFARKYM 193 cab50374_1 5 out 1 239 9 5 10.42 33,128,151,185,227 MKRFIPLIIMLIAIISLAYY VGAGFTAVFLLLSIPEKEVR 194 cab50572_1 5 out 1 447 3 1 3.87 37,59,354,394,430 MMRASIKFQSALYLYILIII MRGLIRLLVGRLHWEKTKRF 195 cab49720_1 4 in 5 240 6 2 -6.96 76,98,121,146 MKFEELLYSIGSLVEKMGAK VRILEVSQSSQTSTEPKDES 196 cab49272_1 4 in 2 156 1 6 -1.57 26,66,110,145 MKKALSIALTLYFILGLALV IPELIGAASILAYILYLGER 197 cab49279_1 4 in 2 123 9 8 -10.64 28,52,89,112 MERIGKRYVFLIFAVFFVGT VTVGIGISTITKAKVVLSEV 198 cab49580_1 4 in 2 123 3 2 -3.94 30,56,82,117 MNLKTTLLLIIGGGLGALAR VVANVLVTITLVFLGFILAR 199 cab49740_1 4 in 2 190 3 6 -3.32 40,83,118,166 MSLSNAKLYGGIGAILQLVS IVAFFSLPDEIKKLERSAVS 200 cab50054_1 4 in 2 289 3 4 -3.10 28,50,163,200 MGLGLWIRTGVLMAFLTALL PPTEKRIERLRKIALEMGIV 201 cab50373_1 4 in 2 123 2 5 -2.42 21,52,74,107 MIWEIIVFTLIATLCISLYG IIQIYRLYGTVDSRILRGDA 202 cab49064_1 4 in 1 133 8 1 -8.89 46,68,95,123 MIIANKTKASELVGNEEVAM GYAIGNYLGITGAYIVYKFL 203 cab49313_1 4 in 1 338 3 3 -3.85 35,58,80,106 MDKLKLYIGLFIAIILGIAG KYEEYRKKIMKTNEETSKFP 204 cab49314_1 4 in 1 486 2 0 -2.56 27,71,304,427 MEIKKRIRVILVISVLVVMF KYSIRDTMHFTKFPFAYLRF 205 cab49641_1 4 in 1 147 9 4 -15.48 32,59,95,135 MSDMGVIVKTNARALIPLIG KVFTGLVSAVFALSLFRRWK 206 cab49655_1 4 in 1 131 0 2 -0.94 38,67,89,121 MMKESMSKFMDATFDYVSWL VIFALGWIYVNLNLKEGNQQ 207 cab49689_1 4 in 1 247 6 4 -6.62 137,160,188,233 MHYVKSPEILREVAENLEKA VDFLLLSYGLYGLAKHRDAF 208 cab49723_1 4 in 1 474 2 1 -2.05 29,306,369,444 MRKGQLLSLDALISLIVVTF EWAIKPARDLGLIKLTVWDE 209 cab50047_1 4 in 1 433 3 2 -3.40 38,63,92,124 MKRMFEFENENGIRFKVREV IDKIKLGRRIKELIDELMKH 210 cab50117_1 4 in 1 127 9 8 -12.64 32,55,90,118 MKMSLIARTTSKIVAPFLVT IKVGAAFVLIFYSLIAFLER 211 cab50190_1 4 in 1 276 9 3 -11.69 32,62,104,162 MSDRQIEVPRVKKSVLGLFI KVTRRDALKAYELYMVIRGE 212 cab50387_1 4 in 1 327 9 1 -12.97 30,150,189,310 MRASDLIIDLVILGIILPSV LLALKPLLGEPEYINLGRFW 213 cab50549_1 4 in 1 177 9 4 -11.72 44,81,131,163 MCSMDVERRLLWVGSSIALL HSIGGAIILKHYRGKPKETN 214 cab50571_1 4 in 1 163 9 6 -16.91 41,63,117,146 MKIKTVFPKERRLFLYILRG SYLYLAIGIGEVDKLSLIFS 215 cab50675_1 4 in 1 308 8 2 -8.33 57,182,216,290 MTKSDLIIMFNRVGRGGIVI NTWILNAGVLRMYIAKREGK 216 cab49222_1 4 out 244 579 1 2 1.61 39,80,169,266 MRKSINQLIRLLSYLRGHAV ELIKKGGIFSEMMKAGGVYG 217 cab49282_1 4 out 6 109 3 2 3.71 20,43,72,99 MSRGLAIIFGFLFLGELIES LVLSFIITLFVTAKTVEVLR 218 cab48967_1 4 out 3 232 1 4 1.21 53,123,191,229 MRNILPFLTRIPVKGDFEKA MAEITRAGTLVILSFSLCFT 219 cab49016_1 4 out 3 147 1 1 1.92 35,63,96,130 MSSLRSLAMPFLSNSISGAT FKGTFNSLEKNSATLFVTLS 220 cab49238_1 4 out 3 175 0 4 0.85 39,123,145,168 MLEGIYLALDELFGPMLKST GWYFLTSYVVGSVLRKILDM 221 cab49903_1 4 out 2 137 7 6 7.41 24,52,83,124 MKGYILYAILSAFFASLVPI MNIKTAIGALLIVIGAILVS 222 cab49007_1 4 out 1 280 7 1 7.32 30,65,101,251 MEVISPVYFIRDIIVLIVSL KRELEPISNLNLTKVSPEIE 223 cab49284_1 4 out 1 194 9 1 9.07 49,81,166,193 MKHEVIALVSLALSFVPPLL APSFIVHWLGSAFFDVLCAF 224 cab49520_1 4 out 1 194 2 0 2.23 25,51,85,145 MKDELVIEVSIFIVFLGFLT SLGMLVGIIMEKKGITSSRQ 225 cab49979_1 4 out 1 257 3 0 3.25 45,74,169,217 MKEKKIKLLNLSSHKLAWWV PVPEQWLENDVKRWLKRRGY 226 cab50510_1 4 out 1 328 1 1 1.79 38,93,115,163 MKKYWDLITAIALSLLLDLI MEAINGTIQSLKLNIDVKGL 227 cab50539_1 4 out 1 364 9 2 14.19 199,299,326,355 MDKMIRLAMEFYKNELSDSV AAFLSYLFGHLMESIFHVSA 228 cab50552_1 4 out 1 479 7 0 7.16 47,147,172,339 MIDINYYLFTADKKLIASNS KKSPPYPSLWFSDDGKIYLG