--- -------------------------------------------------------------------------------- --- --- All proteins with at least 10 transmembrane helices in --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 1 nmb1493 16 in 7 693 9 0 -9.66 27,53,105,129,181,209,237,273,300,340,384,480,530,564,592,659 MKSLKTFLIWGIVVLVGLAS TAKEIPAVYRDGKQPEAQSE 2 nmb0060 15 out 3 672 2 0 2.97 38,60,98,128,235,290,337,369,402,435,477,539,578,627,665 MNKSLSSSVEEYRELTLRGM GLAFFVTGMFFFAQRVLKAG 3 nmb1435 14 in 8 468 9 1 -11.80 34,71,104,126,157,184,218,244,290,320,350,376,417,451 MEKNTLSARAPSPWLPLLLA SLVFKRLHVSDGTNLTRNTP 4 nmb2136 14 in 7 485 9 0 -10.48 42,80,117,139,177,200,246,268,303,344,380,406,439,472 MSRHPAPTGEKTFFGHPFQL ATGFLLLLLVPKLNKMLEGT 5 nmb1622 14 in 1 751 9 0 -11.08 27,249,300,353,389,438,469,512,539,569,612,653,695,743 MGQYKKLWYLLFAVLAVCFT FIGGAICVAIQATKIVFGRD 6 nmb0257 14 out 80 674 1 1 1.66 55,103,139,161,197,243,281,311,361,406,445,508,566,670 MNDMTLYLIIALVPLAGSLI AAAMVFGVLVLLGMTFWGLF 7 nmb0259 14 out 58 480 6 0 6.59 30,59,93,133,155,182,226,262,289,319,341,387,425,471 MNWSDLNLMPAMPEIVLLSL LWGIMPQTVIDWCAKALENT 8 nmb0470 14 out 6 488 6 0 6.77 34,63,106,139,163,210,244,296,324,356,397,426,449,482 MMKLGFKPIPLAIAAVLCAL VVNFLIFFVIGSIWWKVLGY 9 nmb0258 13 in 75 498 2 1 -2.34 24,52,102,141,189,228,260,293,319,352,391,430,480 MFSNYLLSLAIWIPIAAGVL FIEVVHQAANDLIAHVAQSK 10 nmb0792 13 in 13 471 0 1 -0.94 44,81,122,164,209,247,289,319,344,385,407,430,468 MNLHAKDKTQHPENVELLSA GILLNILCVVLVALWAYAVL 11 nmb0930 13 in 12 463 2 0 -2.28 49,79,104,142,167,217,239,277,326,366,388,418,443 MSGQLGKGADAPDLVYGLED LVLPEDKTEAAVKFDTDHLE 12 nmb0319 13 in 10 508 8 0 -8.59 31,70,98,120,160,182,219,249,291,324,351,380,495 MDYPPLKGAALAWVTLSLGL IMIPVIWLAKPPFHNGGGGG 13 nmb1725 13 out 5 481 2 0 2.25 39,82,115,152,181,203,228,259,292,326,370,406,457 METLMDTQTYNYKVVRQFAI TAIGGKAVDAEIPAVSQTQH 14 nmb0543 13 out 4 528 1 0 1.93 18,45,76,121,150,204,229,251,298,366,406,440,526 MALFLSIFPIVLLIWLMVKK TVIPMAIYGVIAVVAAMIFF 15 nmb1818 13 out 1 473 4 1 4.80 31,56,97,131,173,195,230,270,312,341,397,430,452 MDTKEILGYAAGSIGSAVLA LRHRKDLHKLFHYLKKQGFP 16 nmb1715 12 in 10 1067 8 0 -8.62 28,359,390,412,458,486,554,891,913,950,999,1034 MAKFFIDRPIFAWVISIFII HEMAVKHAAEAGITGSDDSQ 17 nmb2027 12 in 10 461 0 2 -0.99 32,54,85,130,159,204,257,295,332,377,412,459 MDGWTQTLSAQTLLGISAAA VNQTLIALIGFALSALLFAI 18 nmb0633 12 in 9 505 9 2 -9.62 30,77,115,137,186,236,290,332,369,393,448,498 MSPKKIPIWLTGLILLIALP ALMLVLFSGIPVFLLKKYAF 19 nmb1277 12 in 7 675 9 1 -10.10 35,72,113,162,212,250,283,339,371,425,469,494 MSLSEFIERRTSFNPMVILT LMLLDDVGQELMAHEQVELA 20 nmb0085 12 in 5 404 1 1 -1.64 28,56,87,113,135,181,238,269,299,329,363,396 MEWEFNSYYTLIAATLVLLV AFFVDLINAAILTGFVNFFK 21 nmb0535 12 in 4 426 9 1 -9.82 52,89,127,149,183,218,269,305,332,359,393,416 MSISIFLKRVIFRHHERQIM VSVICYLYIVFFAVYGYRAD 22 nmb0812 12 in 3 459 9 2 -11.85 39,78,119,157,188,218,275,302,345,376,414,443 MLLDLNRFSFPVFLKEVRLL IALVWCLELCSREMVRSHKA 23 nmb2067 12 in 3 407 9 1 -12.65 30,65,107,142,169,202,235,272,314,336,369,393 MSGNASSPSSSSAIGLIWFG IATVSVRLFFKKTQSLQRNP 24 nmb0360 12 in 2 427 6 2 -6.06 38,69,103,126,169,194,244,293,315,350,385,410 MTASKSGFIGQIFSRNMLVC GMLLLLKVAPWNGEKTQDAG 25 nmb0570 12 in 1 473 3 0 -3.44 48,77,107,144,179,219,264,303,341,386,423,469 MRHLPLFSLMLFPASVYAAD VAFLTPVFIVHTLIFFVFKL 26 nmb1426 12 in 1 417 4 1 -4.99 34,57,111,140,169,208,253,284,306,354,376,412 MSEQHISTWKSKINALGPGI GLIYLTGFTVLFLLNLAGMF 27 nmb1515 12 in 1 436 9 0 -15.96 47,75,111,133,181,203,249,284,313,353,390,416 MYAKKGGLGLVKSRRFAPLF SVFLIKRERRFLGAAAIRKK 28 nmb0428 12 out 7 436 5 0 5.87 47,82,123,161,201,223,261,311,349,371,404,436 MDTSKQTLLDGIFKLKANGT DVPPMVWIVAVLWALKFWYL 29 nmb0277 12 out 2 513 1 1 1.63 48,109,151,180,203,258,335,371,403,425,461,499 MMNMLGALAKVGSLTMVSRV LYFASLAALGFRPRHFKRVE 30 nmb0531 12 out 2 506 1 0 1.35 40,91,136,187,224,276,317,350,389,418,474,496 MQLIDYSHSFFSVVPPFLAL TTGIVLAVLIFLLKDKKRAN 31 nmb1794 12 out 2 437 1 0 1.80 27,49,77,110,151,195,264,308,351,373,401,434 MLTFIGLLIIGVIVWLLLTE AWGLSLAILASSIAAGIVPL 32 nmb1048 12 out 1 489 2 0 2.35 77,108,145,180,211,239,288,346,368,394,432,473 MEKHNGTYRDLHRPASEFAT MGAVGMLPGIPPFLEHFKSL 33 nmb1362 12 out 1 513 1 0 1.00 39,80,113,135,207,268,308,341,363,403,438,505 MKFLDREASIAKPGFNRWLV AVIPLAYGVVMVFVKALDLF 34 nmb1719 12 out 1 522 5 0 5.50 44,108,159,186,235,292,329,372,423,445,469,506 MSQTDTQRDGRFLRTVEWLG IWVFVLGLPVGPGAPTFYPA 35 nmb2052 11 in 131 449 2 1 -2.26 63,119,153,180,218,275,319,344,377,409,446 MANQTNSKAKALLGWVDARF IMFFVYVGITVVGAYLFATN 36 nmb1707 11 in 18 445 8 0 -8.13 36,60,111,162,191,234,271,311,360,395,440 MSNHTSWSSKIGFVLAAAGS TLRYLAPIAIIIVFINSLDI 37 nmb1803 11 in 14 395 7 1 -7.58 41,73,95,132,164,203,230,275,322,355,386 MTEHYKTLPEHELLIQKSLI TAFAFIGVNMFLSGLHSYGT 38 nmb2026 11 in 9 531 4 1 -4.77 50,92,127,159,212,263,314,359,390,412,518 MWGLLGTIATSVFQVGKAMD FALGIFLLLDGGEGGKQTET 39 nmb2031 11 in 8 413 7 0 -7.63 25,54,104,142,167,206,244,301,351,373,403 MPNKTPSLFGGAMIIAGTVI GIVNIAAQVLSQMELVPVFK 40 nmb0536 11 in 6 459 1 0 -1.45 40,62,93,128,161,214,265,287,338,374,448 MFAFKSLLDMPRGEALAVVV CYLSLALTLLFGWTGLTLSK 41 nmb0227 11 in 4 397 9 1 -11.49 33,55,103,138,162,200,243,291,326,352,387 MSDQKNRRNALIGAAFLMAT VGLMAVLSAITISKYIGGLF 42 nmb1461 11 in 3 461 7 0 -7.93 43,72,105,129,164,186,242,277,303,325,392 MMARDNRIQMFPHEWRASTT YLKVLQKGFDQAAAEKIITG 43 nmb1273 11 in 2 478 9 0 -12.58 24,58,97,141,211,266,305,345,385,432,471 MPLLSVEFALFFLAFLPIYW VLLLIIVLAPSGIPGFIYAN 44 nmb1979 11 in 2 338 6 1 -6.79 24,48,84,111,144,174,196,233,271,299,331 MNTRPFYFGLIFIAIIAILA LTYLWLVVGGFLVNYGISKL 45 nmb0388 11 in 1 451 8 1 -8.36 37,73,109,136,187,218,278,324,371,416,440 MSEYTPQTAKQGLPALAKST GVVLLLGAFSVFLIKETHGG 46 nmb0596 11 in 1 604 5 0 -5.34 35,66,88,118,218,240,271,377,399,421,457 MPAETTVSGAHPAAKLPIYI LLKDCKAFAAAPGHPEAKPC 47 nmb1975 11 out 26 511 5 1 5.03 64,115,175,202,247,284,334,381,409,452,486 MSDSKTKERATFGTRRAFMI WKHGQDFNVKDEHEHEQGEE 48 nmb0615 11 out 18 434 8 0 8.72 53,88,152,179,214,250,278,302,330,368,405 MKKHIWAASLLPASLSAEPL RVGKDVEREGLDLNIHGERV 49 nmb1315 11 out 10 403 7 1 7.75 41,71,97,128,173,195,235,318,340,370,392 MNQLKLAVSGAQILFVAFGA VGLCAVLAIMLNSLLPDPKE 50 nmb1647 11 out 7 472 9 1 11.94 36,89,113,174,211,240,269,331,378,411,438 MENILSVLVGTVNRFLWDYL QKKAGRDLSYQYEFHEFHDK 51 nmb0177 11 out 6 463 9 0 11.44 39,90,118,176,212,241,270,327,381,411,440 MQVFLDNPKAFFETVSGWVW KVIVNETRDFKQKITNGELP 52 nmb0194 11 out 6 475 9 1 12.44 41,90,114,171,207,236,265,328,374,415,437 MNENFTEWLHGWVGAINDPM DPEFKLSEHPGLKRRIKSDV 53 nmb0402 11 out 6 508 2 1 2.27 23,87,143,178,204,295,343,394,421,447,483 MNPMYITFAIYLVAVLLIGL EPSRETQERFEKADADYRAT 54 nmb0445 11 out 4 410 4 2 4.49 31,102,124,161,185,243,272,311,333,370,393 MPSAHYPEMSEKLMAVLMAM IALLWLCSHRAWKENGQSEY 55 nmb2064 11 out 2 462 4 2 4.43 31,89,141,190,226,279,301,334,374,403,461 MNAVVVAVIVMLVLSLSRVH PTFIHYNIPLLIAGWIAAMV 56 nmb0552 11 out 1 357 5 2 5.51 28,50,88,130,162,196,219,253,283,318,343 MRPFFVGAAVLAILGALVFF VLYLFTFIPIFRANAFTDDP 57 nmb0162 10 in 33 436 9 2 -12.41 38,89,136,164,195,228,281,325,384,406 MANQQTSSGSSKFGDLKKRL RLTQQYDKLMTRSEMKSFSR 58 nmb2133 10 in 11 409 3 2 -3.26 34,67,106,161,205,238,265,317,349,375 MAFGKSLFHAIGRVSLVRQI SSTDVLFTAAADLGRQRNRA 59 nmb0209 10 in 6 658 6 1 -6.31 37,73,109,131,169,201,246,288,311,376 MNEFSLAPIVIVLLVSVITV LVVAGKKEEIISFENWSLQG 60 nmb0661 10 in 6 766 9 0 -16.09 310,335,371,435,485,536,576,628,700,757 MAHYAIGDIQGCFDELTALL LLGRLEIFTVFILFTPAYWK 61 nmb0050 10 in 3 716 0 0 -0.89 32,78,101,123,154,413,451,473,495,525 MKTPLLKPLLITSLPVFASV QLEPYYRAYRQIPHRQPQNA 62 nmb2006 10 in 3 469 0 1 -0.68 44,78,191,222,259,298,340,363,395,419 MTSTFPRRLARKIRQTRRLS TGNAPARPQTANSKTGMPSE 63 nmb0439 10 in 2 384 6 1 -6.86 33,68,106,128,154,235,280,302,344,370 MKFTKHPVWAMAFRPFYSLA LVYAWKYIPWLIRPRSDGRP 64 nmb0568 10 in 2 410 8 0 -8.30 74,108,137,183,217,295,317,340,370,393 MGLKHFLEKIEPHFLPGGKH PIFDYFVAQANIKRRKARSN 65 nmb1459 10 in 2 307 9 3 -17.64 29,55,91,120,144,175,205,233,268,297 MENQRPLLGFALALLAAMTW ALIVVGGAVTAAVGDRLFKR 66 nmb1603 10 in 2 314 7 3 -7.39 31,61,95,118,158,181,217,245,271,301 MSASKKFPIPLSYFSIALGL VALLLVGTLHRIATGRFLVR 67 nmb0444 10 out 5 284 9 3 17.88 19,44,80,106,131,160,191,222,252,274 MFYQILALIIWSSSFIAAKY ALGVFVVIAATLVAGRLSHQ