--- -------------------------------------------------------------------------------- --- --- All proteins with at least 7 transmembrane helices in --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 68 nmb1990 9 in 19 322 1 3 -1.38 25,70,102,128,158,200,249,290,312 MTAKPFSLNLTNLLLLAVLF FGVLGTALFLWLLLRKPAYA 69 nmb0982 9 in 3 380 1 0 -1.26 50,150,173,211,250,290,312,354,376 MHFIQHTAYGYGADGVYTSF LMPLCTGMAGAVWVAKKMGF 70 nmb0451 9 in 1 255 8 0 -8.50 23,52,80,109,131,160,192,221,247 MQEIMQSIVFVAAAILHGIT LIFIVLLVLALKIGHSGLIK 71 nmb0421 9 out 19 423 1 2 1.27 42,80,108,141,217,248,339,375,405 MGDGVHTLLLDRPIVRDGRK MMLLLRIDYENRRKMRGYRV 72 nmb0418 9 out 5 360 7 1 7.59 42,86,108,151,186,220,256,297,355 MFLWLAHFSNWLTGLNIFQY VRFWIITIVLVLIGLSTLKI 73 nmb1991 9 out 5 324 0 3 0.77 34,68,98,126,159,203,252,295,318 MPSEKNIGFMAGSSRPLWVA SVVVEFAGGLVFLYLVLKHK 74 nmb0012 9 out 4 323 9 0 13.69 29,62,109,146,168,228,260,288,311 MTEYPGIGSPLFYGVFFAAV VFGALGASVLTSLVYTKKTG 75 nmb1562 9 out 3 300 6 3 6.96 25,50,80,123,149,186,208,243,296 MDSLMTLLSVLIPMFAGFFI SFGVVVNIAAPFLMVVFSAL 76 nmb1670 9 out 3 503 7 1 7.09 67,155,206,248,273,358,407,449,477 MFLSRYFTILYRIGILSNGF RLLWDKRASDGIAFNETEKH 77 nmb0705 9 out 1 315 5 3 5.08 30,52,88,110,151,178,213,241,283 MNILSKISSFIGKTFSLWAA NISGSLLATYWAAKAGKHKK 78 nmb1028 9 out 1 291 1 3 1.41 19,46,79,125,166,195,225,254,282 MAYLLISIVFSVSVSILLKM LALCSIACLFYWGEVKVLFG 79 nmb1836 9 out 1 623 2 1 2.71 52,97,163,187,243,267,302,333,367 MSQALPYRPDIDTLRAAAVL GTELAKRFSEKQRFLDTRHN 80 nmb1954 9 out 1 553 3 1 3.04 117,156,200,235,295,318,374,416,451 MLTYTPPDARPPAKTHEKPW GARPRNKDSKFALIRKIGEN 81 nmb0240 8 in 3 483 6 0 -6.03 22,49,94,116,161,199,282,403 MLSFLSGLLSLGIEVLWVRM AGAEVITDDNMIVEYKYGRG 82 nmb0432 8 in 3 262 4 1 -4.70 33,62,98,120,150,173,209,244 MEDLYIILALGLVAMIAGFI MAVKLLIDERNPLYQMIVSM 83 nmb1319 8 in 2 257 5 1 -5.07 27,49,71,110,132,168,199,234 MWHWDIILILLAVGSAAGFI VKTAHKLSSAKLKKSSALCC 84 nmb1219 8 in 1 356 2 3 -2.41 42,89,174,239,266,292,315,337 MYRRKGRGIKPWMGAGAAFA TLVLLREGVQKYFAGSFYRG 85 nmb0250 8 out 72 358 7 3 7.89 47,113,145,186,225,280,315,353 MQEWFQNLFAATLGLGDLGI IGFAYIVILGVWMISPLNLW 86 nmb0185 8 out 10 265 5 2 5.33 38,73,95,125,148,193,215,265 MLKQRVITAMWLLPLMLGML DRTDSLIAVISVYAAMMSVL 87 nmb0587 8 out 10 291 2 4 2.27 40,65,89,121,161,205,245,271 MNLYDLLLAPFAEFDFMRYA ILGKEGGILTKWLKNHRHHT 88 nmb0378 8 out 4 524 3 0 3.74 33,58,95,138,203,347,430,519 MAQIQMSANVKTINAVFAAM ITLPAAAVLSVVCYLVLQAV 89 nmb0978 8 out 3 461 9 1 10.46 24,49,71,104,139,190,219,253 MSSGLVTAAYIVAAILFIFS SVMCFGDAKKTVDDILSELK 90 nmb0408 8 out 2 273 3 0 3.83 39,64,100,126,167,204,238,265 MDFLIVLKALMMGLVEGFTE YRIVFGIAIIILWLSGWISW 91 nmb0764 8 out 2 301 4 2 4.16 60,94,122,145,173,208,251,293 MGKGGDIVVGNGKKYAAPLL AGVALTLSAIYLGSLKRQSS 92 nmb0702 8 out 1 691 9 0 10.95 202,239,275,297,350,372,414,436 MLCVLAGAAYGVFRTEAALS GGVKAQRLRGYKFYWQKKPF 93 nmb1325 7 in 38 720 5 0 -5.43 109,134,169,198,356,385,699 MQQKIRFQIEGMTCQACASR MAASSVSVLSNALRLKRVKI 94 nmb1042 7 in 37 823 4 0 -4.08 197,230,265,289,450,477,794 MKKTCFHCGLDVPEHLHLTV GNALRLHKRGKMQSEKMPSE 95 nmb0881 7 in 19 278 1 1 -1.25 37,81,118,155,207,229,263 MLALKTPGVLPGFKLSLGLT VILFALNVMQWALGRRSGAK 96 nmb0880 7 in 16 286 0 1 -0.47 40,87,121,159,210,232,268 MKPYSANPNLTEPRRLRVLL VQNIITKLQDKKLAAAERNA 97 nmb0611 7 in 11 321 3 1 -3.33 40,126,157,182,204,256,309 MNLNKLKNKLFRRPGQRAVI LVVPIALFQHYENRELEEGA 98 nmb1646 7 in 7 208 8 5 -8.49 31,57,94,118,148,175,205 MYTGERFNTYSHLSGLILAA WHLFVLGGSITQFVSVYGYV 99 nmb0612 7 in 6 295 4 0 -4.11 32,87,125,163,210,232,266 MQKSKLSWFLKLMLALSLAF KRDREAAEAYRQEKLAAEKA 100 nmb1318 7 in 5 248 0 2 -0.65 41,63,98,121,156,184,226 METPTNTPQRSLRQNSIYLL YSLSGYIMAARRFWKKYRKA 101 nmb2020 7 in 4 227 8 1 -8.84 42,69,102,129,170,192,219 MQHDVYDYTAHTVSKNTVLQ ISLYNIFSSLLNILLSLNGE 102 nmb0073 7 in 3 265 2 3 -2.66 58,82,141,170,196,221,253 MKALHKTSFWESLAIQRRVI LVLLLFGLAMVSKFSKGVEP 103 nmb0175 7 in 3 269 7 2 -7.15 30,95,141,175,203,231,269 MPDFSMSNLAVAFSITLAAG TVYGLTTGMAVIAVSLVLFH 104 nmb0296 7 in 1 268 1 3 -1.24 58,84,106,149,196,227,258 MPTVFIFLTAVYAGLGAFAW FVSLMIAYMGSKFVLEIILK 105 nmb1721 7 in 1 469 5 0 -5.50 45,171,221,376,398,433,456 MDTQIKTEADNQSNRRYLTV VIWLLDTLLLSRIPVLRRWF 106 nmb1519 7 out 17 601 9 1 9.29 214,256,285,336,368,405,427 MKKLICLFAVFLMLCGRAFA SEPLLGFVKADKFIEWYEQN 107 nmb0332 7 out 10 286 4 3 4.37 29,120,144,172,197,241,271 MSDLSVLSPFAVPLAAVFGL IFTANDSVWRAVNWWLTHPV 108 nmb1485 7 out 10 518 9 0 13.87 34,71,101,149,171,205,228 MDFSWLAEPHTWIGFATLLV EVVEKEGQRIERVKITKLPE 109 nmb1072 7 out 9 283 9 2 21.11 35,74,113,137,215,238,273 MITHPQFDPVLISIGPLAVR SVPMIVLGIVGFVRFGMKKQ 110 nmb0034 7 out 5 279 9 1 18.62 27,56,89,136,169,197,263 MLVAFLIMLREGIEAALIVG ITWFLCGSRPSETLTRKEEL 111 nmb2004 7 out 5 230 9 2 9.30 26,52,82,113,139,165,227 MNEILRQPSVLLFLTLAVYA LTFNGVLTALIAPLLIPVLG 112 nmb0713 7 out 2 524 9 0 11.02 53,90,120,150,198,226,519 MFRRYLPNRQMNMVSKLDKY WLMGILALAALILFIFRNKE 113 nmb1278 7 out 1 668 6 0 6.67 87,363,391,456,500,563,618 MADMKKITPQNLRPLLSESL NPCILFLPPAKEQGHPPSDK