--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 272 nmb1968 1 in 86 480 1 3 -1.56 167 MKQLAMYINGRFENDFNGEW DGKHGLEEYLQTQVVYLETD 273 nmb1488 1 in 84 477 1 3 -1.48 167 MNEYSQLIKHPDISLPPVSD EGSKYGADEYLELKYLCMDV 274 nmb1353 1 in 78 447 1 3 -1.40 147 MFHSVNVFTGETLYRRPAQD GRELSEFGLYEFVNVKTYWQ 275 nmb0018 1 in 41 170 2 7 -2.01 30 MNTLQKGFTLIELMIVIAIV NGKKIDTKHLPSTCRDASDA 276 nmb0547 1 in 36 129 5 9 -5.54 30 MKNVQKGFTLLELMIAVAIL TLNDGGTIAASGTNQSCPGF 277 nmb0890 1 in 29 162 5 8 -5.25 33 MMSNKMEQKGFTLIEMMIVV QAHLETLSSDVGCEAFSNRK 278 nmb1802 1 in 16 354 3 3 -3.48 100 MLVLGIESSCDETGVALYDT KGREVGAFNVRPRWPLSEIV 279 nmb2016 1 in 16 149 3 8 -3.74 29 MTDNRGFTLVELISVVLILS SSCSDGLDYFKGNDKDCKLL 280 nmb0357 1 in 14 233 9 5 -12.81 30 MFRIIKWLIALPVGIFIFFN NKTNIVLKRMGSAELPESDT 281 nmb0318 1 in 11 384 9 3 -16.58 41 MDTHTDETKLQNTQAKRKRR ESTDWSEVDRTVDEILGQSA 282 nmb0413 1 in 7 581 9 2 -11.48 47 MLIKSEYKPRMLPKEEQVKK LNILGISPTKPLTAAAVKTP 283 nmb1738 1 in 7 475 3 3 -3.03 80 MFFSALKSFLSRYITVWRNV RVLDYLLSPLQTKLDESFRE 284 nmb1288 1 in 4 384 1 3 -1.20 223 MSCEHLTMSYSTFPKTKNDA SYLIGQIDSEVNTDDLGDFE 285 nmb1768 1 in 4 2514 8 0 -8.95 78 MNKTLYRVIFNRKRGAVVAV FKIQQRRKQIRAQISARQWR 286 nmb0104 1 in 3 224 3 5 -3.36 120 MLAIYSINILIYNEKSFFRV WLLLPEADWLGIWHGDRVFM 287 nmb1724 1 in 3 203 2 6 -2.29 33 MKLQQLAEEKIGVLIVFTLL SELDAVVAYLQGLGLALKNV 288 nmb1964 1 in 3 164 5 6 -5.64 29 MKKNILEFWVGLFVLIGAAA KFMTSFAEKNADGGNAEKAA 289 nmb2091 1 in 3 202 9 6 -10.83 30 MKPKPHTVRTLIAAIFSLAL KVSTTVGVQKVITLYQNYVQ 290 nmb0709 1 in 2 139 9 9 -9.69 36 MDNKTKLRLGGLILLTTAVL TRQEINQMAAKQSRGQKRPH 291 nmb0839 1 in 2 443 7 2 -8.00 261 MLFNHTASELLDLCRRTLDL LRRSSNKIGSILIAGMTVAG 292 nmb0945 1 in 2 54 5 9 -5.98 46 MNKYRLKAFQTVFCPDLRRK FSNSALYVGNRQIGVVFDSF 293 nmb1014 1 in 2 197 5 5 -5.36 84 MGKRRRSRHDLEVRAGGGRA KPDALIHGKEVRQKERNSSQ 294 nmb1229 1 in 2 144 9 8 -17.03 45 MTEPKHEMLTKEQVAARKKA LGGANAFEARDKQCVADLKS 295 nmb1749 1 in 2 361 9 3 -18.00 216 MIYLFTGNMGTGKTSRVVSM EQVEQSAKADKPQVLVMGGK 296 nmb1912 1 in 2 175 8 7 -8.17 55 MKQKIWYTYDDIHRVIKALA NYPWDALDIDEHNRLAEAGR 297 nmb0004 1 in 1 214 9 6 -13.05 37 MNKRLFCSRNGLRYYLLGGF LQEGYALSLYRLEKWGRDFF 298 nmb0197 1 in 1 95 8 9 -8.78 58 MHVPENRVRKGRIQKAIKID ITFCACRLGTGAGKMLCGVR 299 nmb0286 1 in 1 204 9 6 -13.37 163 MNFTRLLNQVLSTVQKKGNT LSQALKLDDNLVESLERQLG 300 nmb0366 1 in 1 377 9 3 -17.33 27 MFKKFKPVLLSFFALVFAFW EVRRYAEAAARRSGGRRDLS 301 nmb0373 1 in 1 119 2 9 -2.77 76 MASYVSIKGWIECSDDDIKI YEDNYKVNWKINNGNLIQTT 302 nmb0493 1 in 1 2703 9 0 -10.89 68 MNRTLYKVVFNKHRNCMIAV KPGYPKGTKIEPTKVIIERK 303 nmb0567 1 in 1 258 5 5 -5.43 32 MAKKFDKDSFSGTLIVVLAV YWFGENGYIPYLNKLKSAGA 304 nmb0886 1 in 1 222 3 5 -3.23 31 MCTRKQQGFTLTELLIVMVI NSSGRVEVCPRGDRRTMCQY 305 nmb0887 1 in 1 204 5 6 -5.64 40 MNMKNNDCFRLKDSQSGMAL NLEVSGDNIVYTYQARVGGR 306 nmb0888 1 in 1 313 7 4 -7.43 39 MRRKMLNVPKGSYDGMKGFT IYAYRIDATIRGGNVCANRT 307 nmb0889 1 in 1 197 4 7 -4.29 39 MRKQNTLTGIPTSDGQRGFA AWGKNANTVVVLQSYVSNND 308 nmb0916 1 in 1 46 9 9 -12.50 38 MRVLMAGKVRKQIKQGGWLS SLFVSVFTLFYIFRHSVQFN 309 nmb1205 1 in 1 48 4 9 -4.90 31 MKFRVLVCCFPICLDFISFL VAAATPFFWLLCEVKSVTAN 310 nmb1214 1 in 1 2273 9 0 -10.87 71 MNKRCYKVIFNKKRSCMMAV IEIMYRPVRIYDLQHPKGKT 311 nmb1311 1 in 1 78 0 9 -0.96 61 MPSESQMGQQFLQGRDTRIL CASIPYRFKKMPFPMGWVLY 312 nmb1329 1 in 1 64 9 9 -10.29 52 MDCNDGNVEGFVGYKYPTYA ICFFRLLSFHDIDISSFSFS 313 nmb1480 1 in 1 53 9 9 -14.52 50 MSEQSEKNHNPLLEDERKNP LVVWAGVLALVFFLVFRFWL 314 nmb1551 1 in 1 367 9 3 -18.00 225 MAEICLITGTPGSGKTLKMV VQQSAQQHSDRAQVATLGGK 315 nmb1626 1 in 1 367 9 3 -18.00 225 MAEICLITGTPGSGKTLKMV VQQSAQQHSDRAQVATLGGK 316 nmb1698 1 in 1 252 9 5 -9.43 32 MDKLDYCRRFFATWLGFVIF LPIAARRLNEYLQDYFTRKT 317 nmb1758 1 in 1 70 7 9 -7.52 36 MRSRSVRLSQMLSSPFVPIC ILLNTLKPNTPINTILKHSL 318 nmb1986 1 in 1 143 1 9 -1.00 123 MTENAQDKARQAVETVVKSP GTVFALAGAFVIGRSRDQGK 319 nmb2010 1 in 1 525 6 3 -6.00 65 MMKKSFLTLVLYSSLLTASE ITGDAGSLNIRDGKAEYVYP 320 nmb2092 1 in 1 210 9 6 -14.86 53 MPSEPPSDGIARHPKSTIKM KPDTPKNTPPKPHKEILDNL 321 nmb2135 1 in 1 1405 9 0 -10.54 73 MATSDGIAANHFETDIMTDT IRFDRFSGSDKKDSAGNGKG 322 nmb1395 1 out 73 346 8 3 8.24 190 MKAMVYHGANDIRFEEKPRP AYDVFKHAAENQVMKVVLEA 323 nmb1304 1 out 72 378 8 3 8.52 219 MEMKQADSTIKSRAAVAFAP QINKAFDLMHEGKSIRAVIH 324 nmb1938 1 out 27 156 9 7 17.84 25 MNINATLFAQIIVFFGLVWF LRSEVDASKHAKLLDTLKQE 325 nmb0604 1 out 19 354 6 3 6.28 197 MKAARFYDKGDIRIEDIPEP GFERLIHNNESAVKIIVSPN 326 nmb0341 1 out 14 875 3 1 3.72 395 MPAGRLPRRCPMMTKFTDCT LEEAEGDVLKRAQALAQELG 327 nmb0414 1 out 12 492 6 2 6.52 320 MFSKLTPLAETGIPTLSCAN QGVKHRFSDLEIVGQALLTR 328 nmb1728 1 out 12 144 8 9 8.57 39 MAFGSMNSGDDSPMSDINVT LEAARQAGITKIGFVTETKA 329 nmb1220 1 unk 11 315 0 4 0.00 19 MEFFIILLVAVAVFGFKSFV ADIGSLISAGMKIIDSSKTA 330 nmb1916 1 out 9 320 7 3 7.40 126 MQYAKISGTGSYLPANRVSN QNLLLEGIGGGFAWGAVLLQ 331 nmb0125 1 out 8 92 5 9 5.81 80 MTEHTPEKKNVKVDQLVVQD IYAADTAISWLFFDVLLRRE 332 nmb1747 1 out 7 501 9 2 21.33 495 MYALSEKYNDNGFKAYKVLG AVLLAFIIMSAFVVFGSLKG 333 nmb2051 1 out 5 266 9 4 18.16 257 MRAAKMKQTLKNWFAALLLA LFAVMLPLAYFLNKEYWKDV 334 nmb1781 1 out 4 56 5 9 5.41 36 MMFAKHYQFIALGIMLLLYM LFFICFITGKILARLLEKSF 335 nmb0028 1 out 3 72 9 9 9.35 31 MLKTLTFAALHFSVAFSVTY NLYEKNKTVKQTQPFQLHRC 336 nmb1628 1 out 3 517 9 2 20.57 510 MLGMFSVNSYAERFKYPIGN LLALAWAVAAFFCIRTVSRE 337 nmb1294 1 out 2 255 7 5 8.00 94 MSSNKASFFTRLRRLCRLAV LKDKIEESIRAVVADDADIA 338 nmb1516 1 out 2 62 9 9 14.03 24 MMESMFILVPISIILAFVIG ILMDDDSTSKLIEKERENDV 339 nmb0306 1 out 1 64 9 9 43.18 62 MLLQRSLLVYEILPDVKAES NEWRVLFLSICFFLFEIKFL 340 nmb0478 1 out 1 214 9 5 19.81 193 MESTLSLQANLYPRLTPAGA LGKEAFVTLVRILYRRYSNR 341 nmb0562 1 out 1 71 7 9 7.71 23 MKTLLLTFGIFLTVIIGMAV CDTLQKKLDEEKQAGGIRVD 342 nmb0755 1 out 1 47 5 9 5.56 29 MLHINPFFILFVGWEDSYLL RKFIVRCYCWQSYHVLLLME 343 nmb0770 1 out 1 116 9 9 9.50 68 MSDGQNIPAKMMSLQLKDMN KDQIEVELGNTIGGSRPTFT 344 nmb0778 1 out 1 424 1 3 1.66 47 MPSETSSPRKENETEVHIPA AKKQTVPEKAGRSPSAKGER 345 nmb0892 1 out 1 140 9 9 9.96 68 MLIGLLPWALILGMQGGQKG YSGLTKTSTALPRLSSKKTI 346 nmb1129 1 out 1 68 9 9 52.98 60 MKAVRDIALWLAVTVWINFF RFLLPLFLACILFYRHFRKR 347 nmb1221 1 out 1 135 4 9 4.00 23 MTVWFVAAVAVLIIELLTGT EPGTRALIVRKEGNLLIITH 348 nmb1410 1 out 1 179 4 9 4.31 35 MDFLEIFIMSAFRKILLIIS YIPLYDEINNSIRIVVNARI 349 nmb1427 1 out 1 59 0 9 0.82 45 MENIVKFEHEVLIVCVGRYL FLKTVGFGFVWGQSRPNWSN 350 nmb1547 1 out 1 100 8 9 8.67 88 MGYRVGINCFDTRLQADDYL VIYGFRLLINFLKDIGKVGT 351 nmb1550 1 out 1 94 9 9 31.33 82 MKLLAALIPLLMSVAGRILT IAFILSFKQMTKLATSIGKK 352 nmb1627 1 out 1 94 9 9 31.33 82 MKLLAALIPLLMSVAGRILT IAFILSFKQMTKLATSIGKK 353 nmb1630 1 out 1 100 4 9 4.67 88 MGYRVGINCFDTRLHADDYL VIYGFRLLINFLKDMGKVGI 354 nmb1801 1 out 1 298 3 4 3.25 34 MFRLQFRLFPPLRTAMHILL EYWIRRFPTQYLFMYNRYKM 355 nmb1844 1 unk 1 40 0 9 0.00 19 MRFIAYCCYMFVLLYNGCIK KIYAHRLSRRFESLIFDNLE