--- -------------------------------------------------------------------------------- --- --- All proteins with at least 10 transmembrane helices in Mycobacterium tuberculosis --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 1 e291002 16 in 5 758 7 0 -7.09 59,87,145,167,217,244,273,310,339,376,422,519,571,607,634,702 MAAPTPSNRIEERSGHASCV AERKLQRRLGAPASASVAAP 2 e279647 16 in 2 667 0 1 -0.93 34,56,97,119,181,228,281,331,364,394,425,467,524,561,606,644 MSGATVGAREITIRGVVLGA TASYRLAAPAGSSKPLPDLP 3 e1299866 15 in 1 1184 9 0 -10.94 55,84,125,165,196,235,274,308,358,395,425,462,494,534,1000 MRPSPGEVPTASQRQPELSD LGTTDGKSQADISEITIYAA 4 e249412 15 out 3 661 8 0 8.68 43,83,128,189,231,263,293,333,384,419,452,504,537,573,620 MGTHGATKSATSAVPTPRSN YADDELEAYNAMLRELSRMR 5 e1237584 14 in 12 508 9 0 -9.17 29,63,98,120,154,176,215,243,284,318,346,370,415,495 MTPRQRLTVLATGLGIFMVF AVLLTGAFVLGWTRFPRTPA 6 e266967 14 in 1 1094 1 0 -1.95 36,222,269,341,375,400,423,471,537,569,592,622,662,705 MPHDGNERSHRIARLAAVVS VEEGVITVPGWGRPGPIRAL 7 e316900 14 in 1 471 3 2 -3.52 41,73,109,133,162,191,242,264,290,325,360,386,422,458 MTETASETGSWRELLSRYLG LAAAGVIASYQATHRDRRLP 8 e1300744 14 out 75 633 2 1 2.10 58,107,142,164,200,234,271,302,355,399,438,484,528,630 MTTSLGTHYTWLLVALPLAG ALSMLVGAVLVAAALLVVQL 9 e1300064 14 out 23 640 5 0 5.53 35,71,115,157,195,226,262,290,322,365,410,464,515,640 MTAAPTAGGVVTSGVGVAGV SVHRYLAYGALGVLIVLVVA 10 e1248749 13 in 28 531 0 0 -0.68 32,62,98,177,225,268,304,335,365,387,438,473,519 MILPAPHVEYFLLAPMLIVF VLGIAPQPVLDLADQAAQLL 11 e1264588 13 in 20 1065 9 9 -9.94 60,98,131,153,187,210,248,276,318,351,379,408,852 MHTVATNNAAPVIAAGPVGP REAGRIAAREALPQIMELVH 12 e1216615 13 in 14 579 6 0 -6.53 38,75,107,129,165,189,224,252,294,327,355,382,479 MTTAIRRAAGSSYFRNPWPA PGPPGRRAWQADTESTAPSA 13 e264148 13 in 14 537 8 0 -8.46 26,64,97,119,153,177,215,242,284,318,345,370,494 MNRTQLLTLIATGLGLFMIF MTVECAVSHMPGATWCRLWP 14 e249450 13 in 12 488 0 0 -0.84 23,50,84,135,179,227,263,295,340,362,397,429,478 MTGLLLAAILAPLAASIASL GITAGPLADLLGIAASNVGL 15 e315187 13 in 9 530 7 0 -7.62 71,109,142,164,201,223,258,287,327,362,388,420,506 MTALNDTERAVRNWTAGRPH YTPQQVAHAQEVKEAIDAGE 16 e266573 13 in 8 540 3 0 -3.65 60,100,134,156,187,212,248,278,322,355,380,410,519 MLGNAMVEACPAEGDAPVPI IPAAFLPKQQASHRRAPLLS 17 e1300728 13 in 2 795 0 9 -0.75 45,92,116,163,187,209,514,540,589,624,655,728,780 MRVDGRDIGVSGNLLQPLTR CWLPVFAGWQVMHWLTRHEM 18 e1300745 13 out 61 553 0 0 0.21 27,52,101,171,214,267,299,330,357,380,425,463,510 MNNVPWLSVLWLVPLAGAVL PSVAHPVPAVGASRTAEGPH 19 e1299892 13 out 3 481 0 0 0.75 41,64,116,154,187,211,235,276,318,368,396,432,464 MVGPRTRGYAIHKLGFCSVV AMAYLHYYRIIRRVGDRPST 20 e1237789 12 in 52 573 6 1 -6.67 60,102,139,190,230,281,312,343,376,415,451,496 MTAEAPPLGELEAIRPYPAR RLRAEAHVGRHHDEPAMVTS 21 e315461 12 in 32 487 7 2 -7.89 48,72,122,153,183,229,270,312,364,389,435,459 MPPLDITDERLTREDTGYHK VAHHAIDHTKSVAVVHSADP 22 e328407 12 in 32 489 9 2 -9.11 47,71,120,153,183,227,269,311,363,389,432,457 MSAASQRVGAFGEEAGYHKG ERLGHTGPFPAVANPPVRSR 23 e314474 12 in 13 1048 9 0 -11.11 44,81,115,137,170,194,232,260,301,336,364,391 MHISLHGGKGFANLTRRRRP REAGRVAAREAMPHIMALLN 24 e311077 12 in 10 425 9 0 -13.46 35,63,105,127,167,198,256,291,331,353,386,410 MKRVALACLVGSAIEFYDFL LISLVCTYRLPETAGSALVS 25 e315171 12 in 6 593 9 1 -10.64 41,78,119,172,223,260,293,347,380,432,474,502 MSAKERGDQNAVVDALRSIQ LDDHVFESDRHVTRRNTTSS 26 e303501 12 in 5 469 9 1 -10.18 52,85,122,144,182,210,255,293,323,358,410,443 MGRSHQISDWDPEDSVAWEA GLKSAGELVPATTAPAGLAY 27 e314486 12 in 5 495 8 2 -8.08 52,79,124,167,194,256,295,346,394,416,451,473 MAGRRRMKSVEQSIADTDEP YGRRHSAQGLRQARESATRR 28 e321095 12 in 5 429 9 2 -10.70 19,41,71,113,142,169,193,252,294,332,386,423 MSVVAVTIFVAAYVLIASDR TAVSIALAAIYLWLRYFVLL 29 e264157 12 in 4 476 6 0 -6.57 62,84,131,183,210,244,284,335,381,404,432,461 MPTTSMSLRELMLRRRPVSG VAVIFYLMWGRHHSALNEEV 30 e264236 12 in 4 515 8 0 -8.10 74,109,136,163,207,232,279,320,350,386,438,470 MEQHTLLQREESPRSPAAPS PAELIGPRTQSDRFSGCSIS 31 e303505 12 in 4 463 9 2 -9.58 66,109,140,168,209,234,279,309,348,370,420,448 MALTTAPAIDYALPRQQDEG LLVVTWYCYLRRTTPMGQVG 32 e320927 12 in 3 428 2 2 -2.03 19,41,72,110,148,192,246,268,295,338,384,423 MSIIAITVFVAGYALIASDR VTAVSLVLSAVYLWLRYFVF 33 e1252444 12 in 2 436 6 0 -6.59 46,72,102,131,203,230,253,288,318,344,383,408 MAKTSHRVSSADGMSKRILR KSVDVRGLPQVSRTSRPKTG 34 e332791 12 in 2 486 8 0 -8.70 33,55,79,102,128,151,174,234,280,318,340,374 MLQRIARELLSGVAVAIVAL QLTALADNEQRDKLRTVLES 35 e1253984 12 in 1 430 6 0 -6.44 45,70,107,135,173,195,260,284,327,349,384,411 MRYTGPERCSGDGQVRAAGD VLAAASCGPLSSKEPSRDSY 36 e1299723 12 in 1 944 9 0 -10.03 31,211,234,256,303,331,415,585,607,639,695,717 MFAWWGRTVYRYRFIVIGVM QRRRGGGALSAQDLLRREGR 37 e311090 12 in 1 548 8 0 -8.76 59,113,167,196,227,272,328,377,428,469,494,538 MSSTVIDRARPAGHRAPHRG AIDAALITLGAMAFRRRDVR 38 e267400 12 out 5 666 2 0 2.69 25,52,76,116,208,251,276,315,350,422,476,514 MGLWFGTLIALILLIAPGAM IYDNGEARIYEWRGTAAATH 39 e306718 12 out 4 413 3 0 3.34 19,46,69,124,159,192,243,265,288,334,363,406 MTLAVALILLAVVLGFAVAR VPAALAMAVLALWASAQVLG 40 e266968 12 out 2 1098 2 0 2.37 46,236,293,399,454,495,554,591,613,644,683,723 MTQCASRRKSTPNRAILGAF LELGTATRSGLWSPGKIRIG 41 e324884 12 out 2 687 1 0 1.52 48,83,118,140,198,233,263,304,340,363,393,497 MAGPTAPTTAPTAIRAGGPL QRDWYEDLGDLSESRQLAAT 42 e1253247 12 out 1 516 0 1 0.51 97,133,197,219,246,299,345,367,401,438,465,496 MTTPSHAPAVDLATAKDAVV VLYRSPDRRGVQAATPVVNT 43 e266966 12 out 1 1094 2 0 2.32 48,249,288,356,419,487,550,584,610,639,681,723 MATEAAPPRIAVRLPSTSVR DLNLGTVTRSGLWSPAPLRR 44 e323030 12 out 1 413 6 0 6.00 42,73,115,137,173,195,245,272,306,333,373,395 MTAPTGTSATTTRPWTPRIA LFGMTVSQHLFENPTLSPGD 45 e1251163 11 in 52 502 2 0 -2.01 68,112,147,169,199,226,343,374,400,441,464 MTTLWQPHRNDYSPIPGRGV RHFWENGGRWPAERSPAADE 46 e264139 11 in 11 432 2 0 -2.95 56,81,130,162,216,239,264,296,337,378,400 MYERRHERGMCDRAVEMTDV LLFGPTVGIAIHVAALARRP 47 e315223 11 in 9 428 9 1 -9.94 49,82,132,155,189,228,276,317,364,387,423 MAGEFRLLSHLCSRGSKVGE WVVAVMVSLLNVMLIYLTVT 48 e1253936 11 in 5 443 9 2 -9.18 37,74,111,134,162,197,261,293,339,377,416 MATIAASPTHNALGKAARRL RTVCANDSEIMLHPSPATPF 49 e316976 11 in 5 449 5 1 -5.55 29,80,109,215,259,281,318,364,397,424,446 MRIGRREGLAVAIGFVLVGA LWLAVNAAGALLLNSIIFTN 50 e276873 11 in 3 395 5 0 -5.36 30,60,94,117,153,178,228,263,292,314,380 MRGQAANLVLATWISVVNFW LVACTYTALHAREPVSEEAS 51 e300422 11 in 3 958 2 0 -2.58 37,219,241,263,315,346,396,792,834,885,919 MRSQRLAGHLSAAARTIHAL PQVLGPRRTTALSAERAALL 52 e316921 11 in 3 445 4 1 -4.81 44,81,108,130,176,215,279,311,348,370,423 MNNPGSRAGTLLHFRVVAWA LLMLRVQVSRHGGALTTAQS 53 e1237581 11 in 2 418 0 1 -0.41 45,69,113,135,180,243,278,307,336,361,390 MSGTVVAVPPRVARALDLLN AMPETVDSDVRVRSRPTLGG 54 e248800 11 in 1 440 4 0 -4.54 43,66,114,143,171,208,248,293,337,363,405 MRRPLDPRDIPDELRRRLGL TRRARQTDSGDTQRSGHPSA 55 e332788 11 out 34 556 6 1 6.52 70,119,150,180,227,268,309,363,390,433,457 MPDDIAAADPTDTQPHLRRD AVVGLADGGRDPQYHHDGPD 56 e249963 11 out 18 477 9 1 11.64 34,69,140,165,211,248,277,305,327,364,413 MDQFPIMGVPDGGDTAWMLV VEDSRNGIQERIGQKVEAEP 57 e315863 11 out 10 449 2 2 2.02 47,78,121,184,212,268,305,336,359,398,427 MTVSIAPPSRPSQAETRRAI IKNKADTYLDREQGFAFYGH 58 e316556 11 out 9 431 3 0 3.87 53,78,130,161,207,253,296,340,375,397,421 MAVGAAAVTEVGDTASPVGS LLCGPLVGIGVHLVALARTD 59 e243646 11 out 7 404 9 1 12.51 51,95,121,156,186,217,245,272,313,366,388 MQYGLEVSSDVAGVAGGLLA GVATLIPLLRRGDDYYDPDL 60 e1252473 11 out 5 472 4 0 4.24 87,117,144,193,230,260,282,345,397,429,464 MSGTVMQIVRVAILADSRLT DVSLIPVMAYLVGLFAWVLN 61 e267394 11 out 5 441 7 0 7.35 86,133,155,181,212,250,277,313,352,399,428 MPRVEVGLVIHSRMHARAPV YLAGLVVHTIVGRRGQPVIG 62 e316866 11 out 5 417 2 0 2.46 23,64,95,128,157,189,212,235,277,324,350 MNLQLFLLLIVVVTALAFDF APTPPPNHRAPQFGVTTRNA 63 e324867 11 out 5 422 3 0 3.95 37,67,104,159,181,236,278,319,341,367,400 MAAPRLTGDQRNAFMASFLG ATGIRFGTTETAFLVRHRNR 64 e329750 11 out 3 436 2 0 2.00 56,93,139,166,202,227,254,289,325,348,388 MAGGMDQPPGQPRRRTRQQS PVGSTRYQIDDALEGVSARA 65 e1253991 11 out 1 419 1 2 1.49 50,103,125,150,179,235,263,298,327,368,399 MGARAIFRGFNRPSRVLMIN RRLDTFTSGSQNMTGRWAAP 66 e304958 11 out 1 407 6 2 6.34 57,92,134,163,185,207,239,272,302,350,373 MGPADESGAPIRPQTPHRHT RWERRNEPISVGELQADAIA 67 e316861 11 out 1 477 3 0 3.86 37,64,95,175,208,239,278,317,355,384,431 MGLSSDDTRRREVVRDLAAG RSAGSTHPVRPKIYRPPDHS 68 e1253270 10 in 31 441 9 2 -11.36 36,92,138,174,205,234,287,336,395,422 MLSAFISSLRTVDLRRKILF LDTVKQIESQLMQRNYEGFL 69 e266935 10 in 15 469 3 1 -3.67 39,98,135,162,199,245,276,372,407,437 MTTRLQAPVAVTPPLPTRRN RTRPRNKSPITAAGTEVIER 70 e280524 10 in 11 491 4 2 -4.07 43,77,114,180,222,260,282,337,359,389 MTAPLDRAPVTDLPANNKGR QVSLGGLVGRPAGPQRADVD 71 e266396 10 in 9 498 9 2 -12.65 42,73,112,138,174,211,252,286,320,345 MTETVTRTAAPAVVGKLSTL DDIADRVQALIAELLATAKT 72 e255063 10 in 7 552 3 0 -3.81 58,84,121,165,191,230,408,456,514,547 MSDNAKHHRDGHLVASGLQD ITLPSAAILASVGLVALRAI 73 e1252519 10 in 4 967 0 0 -0.62 45,227,270,324,352,402,799,839,892,927 MSTKFANDSNTNARPEKPFI TVPSETQPAGRPLAMSSDRL 74 e1300069 10 in 4 1089 1 0 -1.68 58,246,283,336,366,418,899,942,992,1026 MCDVLMQPVRTPRPSTNLRS EQSPPDDDDLIGLWLHDGLR 75 e304957 10 in 4 576 2 0 -2.02 89,111,148,177,227,249,296,318,382,554 MRWFRPGYALVLVLLLAAPL GYWVRRHLHHCEDTPASRAQ 76 e1253102 10 in 3 964 0 0 -0.93 48,230,274,327,357,407,804,845,897,932 MIVQRTAAPTGSVPPDRHAA RQRPIPQPWPSPASARTFAL 77 e255043 10 in 3 968 1 0 -1.57 39,226,262,315,348,397,793,834,886,921 MSERHAALTSLPPILPRLIR RLVRALLLPSGQHPSATGAH 78 e255167 10 in 3 542 8 0 -8.73 31,54,115,139,185,256,293,331,378,409 MNGRRTIGEDGLVFGLVVIV RELQAAMDLEEVQLLDPADA 79 e256389 10 in 3 1146 0 0 -0.27 41,228,266,318,347,398,852,895,944,978 MARHDEAKAGGLFDRIGNFV TSIGEPAVGHAGSKPDAKLS 80 e290746 10 in 3 962 1 0 -1.63 43,226,268,322,352,402,798,840,890,926 MVPGEVHMSDTPSGPHPIIP TVPEAHTRQGARRIQPHLHR 81 e1252427 10 in 2 966 3 0 -3.88 31,213,242,301,325,388,551,573,670,692 MMRLSRNLRRCRWLVFTGWL KWEEVRRRCLSVAVAMLEEA 82 e233585 10 in 2 512 7 0 -7.16 47,69,99,130,254,283,312,345,380,404 MPASRLVRQVSAPRNLFGRL PRHPAVGVREGAPLDAGQRI 83 e264099 10 in 2 455 9 1 -12.04 45,81,132,164,209,251,285,307,335,377 MNRVSASADDRAAGARPARD KAPTADDEALPLSDEPPPRA 84 e265573 10 in 2 518 6 0 -6.58 30,65,96,164,186,221,287,329,351,491 MRAGRRVAISAGSLAVLLGA EHADEPEVQEQPTLAPQVEP 85 e1299956 10 in 1 855 6 1 -6.29 45,280,332,380,425,451,503,742,806,838 MNDQAPVAYAPLWRTAWRRL AGMYPAWRLGRMTIRTAIRE 86 e241777 10 in 1 548 8 1 -8.13 134,163,196,222,266,289,366,397,439,509 MAPTPGRRTRNGSVNGHPGM GNRPVMAEQETTRRGAAVAP 87 e254886 10 in 1 419 6 0 -6.64 31,65,93,115,155,184,241,282,318,390 MRNSNRGPAFLILFATLMAA ALRELDLAPQADIDRPVGSA 88 e255073 10 in 1 409 2 9 -2.33 37,63,87,116,189,255,278,324,369,398 MGANGDVALSRIGATRPALS ALELMALVMMFAIRLPRVAP 89 e301291 10 in 1 920 7 0 -7.70 61,236,258,290,331,361,408,779,807,839 MPSPAGRLHRIRYIRLKKSS LGLGVLITVQRAWLPTTPGR 90 e276904 10 out 8 560 1 0 1.90 48,73,132,154,203,225,276,350,372,413 MIPTMTSAGWAPGVVQFREY KIGEDHIFMTLPTAVQAFRR 91 e279630 10 out 6 514 4 0 4.66 44,82,225,289,311,350,412,434,474,507 MGFGASRLDVRLVPAALVSW TMAVAVICLLAWSLSGLVGP 92 e316023 10 out 6 359 9 2 10.32 25,69,97,137,177,208,248,275,297,348 MRQILIAVAVAVTVSILLTP AITCGLGVALFYGEWLAAVG 93 e306647 10 out 5 492 0 2 0.35 66,123,223,255,293,333,368,397,439,461 MAPGDWSVFAWHAANLPTMP QRLNRQTAEAERGGSDRPTT 94 e312290 10 out 5 509 5 1 5.90 151,185,239,269,294,379,406,434,470,501 MTAPHKVAFPARCAVNICYD AMIALLPAAAALGGLFAWLR 95 e276779 10 out 4 439 6 0 6.07 57,113,146,185,214,299,330,373,397,424 MSQVGHRAGGRQIAQLALPA LRLIFVGWRAYSGRWAVTGA 96 e306533 10 out 4 475 3 0 3.72 25,52,74,107,146,191,218,240,267,332 MNLHYLVEILYIISFSLFIY TMLFGDAKKSVTEVSEELKA 97 e1253926 10 out 3 360 3 2 3.66 39,80,115,149,180,232,264,303,330,360 MLKRVPWTVVLPSLAFVALV RLQGEVHLVLLAAYLFLAVV 98 e267405 10 out 3 643 0 0 0.19 49,117,203,225,247,285,325,374,401,462 MPSRRKSPQFGHEMGAFTSA RFVVEDIGPFVLAIRKPQES 99 e304623 10 out 3 571 9 1 14.39 24,88,157,196,275,305,408,448,515,559 MSGTSWLQFAALIAVLLLTA GGLTFFPALALGPIVEQLST 100 e314472 10 out 3 385 2 1 2.52 23,45,74,118,170,201,246,283,306,364 MEVSRALLFELGVLLAVLAV VGPILARYTGGGLPAAAVAS 101 e1253254 10 out 1 427 1 0 1.67 36,90,119,168,211,237,299,335,357,407 MSAWRAPEVGSRLGRRVLWC TARMTPQRSLTRGLTPAPTA 102 e1300719 10 out 1 1400 0 0 0.49 104,162,197,232,300,328,419,1274,1319,1387 MAPLSRKWLPVVGAVALALT VSVVAASVVATSESRGQDRM