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Transmembrane helices for myctu (Mycobacterium tuberculosis)

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
184e2506126in218|ali|phd|phdHtm|57950-5.2036,70,152,174,257,282MIRTWIALVPNDHRARLIGF
185e3168866in96|ali|phd|phdHtm|57691-15.8246,71,170,192,271,300MNRPSAVSRRQRDLLAASGL
186e12166026in17|ali|phd|phdHtm|27487-8.2330,89,123,152,205,259MGARRATYWAVLDTLVVGYA
187e12999446in16|ali|phd|phdHtm|29194-14.6940,104,134,159,218,270MTEFASRRTLVVRRFLRNRA
188e2641606in16|ali|phd|phdHtm|29095-9.5035,92,125,173,221,277MRDAPRRRTALAYALLAPSL
189e12520186in14|ali|phd|phdHtm|28085-8.7338,97,132,161,212,264MGWADRIVHRHFIRGLALYA
190e12520196in13|ali|phd|phdHtm|30094-12.8735,92,126,178,225,282MTRRRGRRAWAGRMFVAPNL
191e2767806in12|ali|phd|phdHtm|30394-12.4743,103,135,189,237,291MAAPQRARLRSSKERVRDYA
192e2767816in12|ali|phd|phdHtm|27575-7.6632,93,127,155,206,259MTPDRLRSSVGYAAMLLVVT
193e2470966in9|ali|phd|phdHtm|30883-8.2958,126,168,213,243,265MRAAGLLKRLNPRNRRSRVN
194e2641596in9|ali|phd|phdHtm|27495-9.0531,93,126,155,207,259MSSPSRVSNTAVYAVLTIGA
195e12166016in8|ali|phd|phdHtm|30794-12.1447,108,140,190,236,290MTSVEQRTATAVFSRTGSRM
196e3151656in8|ali|phd|phdHtm|30194-12.2057,107,141,168,222,289MGESAESGSRQLPAMSPPRR
197e3152086in8|ali|phd|phdHtm|33893-9.9942,108,149,200,249,322MLARAGEVGRAGPAIRWLGG
198e12997746in7|ali|phd|phdHtm|30595-14.6558,112,151,173,228,294MSPSMSIEALDQPVKPVVFR
199e2561746in7|ali|phd|phdHtm|44291-13.8287,208,240,262,317,346MASKAKTGRDDEATSAVELT
200e2335846in6|ali|phd|phdHtm|24912-1.4453,75,131,153,190,214MMRSLATAFAFATVIPTPGS
201e12520306in5|ali|phd|phdHtm|87451-5.5759,87,123,186,225,527MKLGAWVAAQLPTTRTAVRT
202e12997736in5|ali|phd|phdHtm|32495-9.2253,103,144,196,257,313MVTEPLTKPALVAVDMRPAR
203e3049546in4|ali|phd|phdHtm|44240-4.6070,132,168,202,269,431MSDPARGAEAEDAYGFPAGL
204e3014466in3|ali|phd|phdHtm|30240-4.3232,57,80,157,187,209MLAATLLSLGAVFLAELGDR
205e12524296in2|ali|phd|phdHtm|41243-4.0557,89,200,282,308,349MSHDAPARNLRQRVGALPRT
206e2669606in2|ali|phd|phdHtm|28062-6.0271,149,178,207,243,266MTFMDAQASFQTQSRTLARV
207e2751426in2|ali|phd|phdHtm|48920-2.63165,191,283,332,354,487MTNDLPDVRERDGGPRPAPP
208e3066686in2|ali|phd|phdHtm|24630-3.3139,74,101,168,191,214MSTHNDSAPTSRRRHIVRLV
209e3211036in2|ali|phd|phdHtm|32422-2.2154,125,164,205,239,272MSDQVPKPHRHHIWRITRRT
210e3228816in2|ali|phd|phdHtm|26572-7.3976,118,170,192,217,256MTTSTTLGGYVRDQLQTPLT
211e12374486in1|ali|phd|phdHtm|26154-5.7463,93,138,177,199,253MTQTNRPAFPAGTFSPDPRP
212e12524026in1|ali|phd|phdHtm|24944-4.0357,100,132,174,206,235MRVGPVGHQCAECVREGARA
213e12539876in1|ali|phd|phdHtm|42591-10.0460,93,125,147,172,199MPSYGNLGRLGGRHEYGVLV
214e2494016in1|ali|phd|phdHtm|22061-6.4326,50,82,116,149,196MSNANFSILVDFAAGGLVLA
215e3144856in1|ali|phd|phdHtm|41670-7.0449,73,125,157,283,379MTTQIGSGGPEAPRPPEVEE
216e3160446in1|ali|phd|phdHtm|23791-14.7837,102,125,160,182,208MADASVVARLRSWALAVWHF
217e3160586in1|ali|phd|phdHtm|42272-7.7334,56,149,193,317,339MAQGLKLGLHIPLWAGYACS
218e3172326in1|ali|phd|phdHtm|28254-5.4998,127,167,199,245,279MPRDYTAPRWAHAWAGEPRP
219e3209286in1|ali|phd|phdHtm|25295-9.5753,82,133,168,201,243MRAISSLAGPRALAAFGRND
220e3216666in1|ali|phd|phdHtm|23881-8.2926,84,106,147,178,206MTRPQALLAVSLAFVATAVY
221e3242686in1|ali|phd|phdHtm|29543-4.8499,123,145,190,246,283MVESSTASAAAVLRARYPRT
222e2576906out93|ali|phd|phdHtm|639303.7642,85,142,237,265,354MGPKLFKPSIDWSRAFPDSV
223e2436486out45|ali|phd|phdHtm|250747.6946,107,147,184,208,235MTETILAAQIEVGEHHTATW
224e3065406out38|ali|phd|phdHtm|718000.49116,142,183,360,382,699MTLEVVSDAAGRMRVKVDWV
225e12374606out37|ali|phd|phdHtm|657101.1053,80,122,283,314,628MTLTACEVTAAEAPFDRVSK
226e12646036out34|ali|phd|phdHtm|660101.0048,71,113,276,305,630MAVRELSPARCTSASPLVLA
227e12645246out21|ali|phd|phdHtm|2669511.7118,84,114,138,195,247MIAAALILLILVVAAFPSLF
228e3045526out14|ali|phd|phdHtm|7099110.03101,260,288,627,657,701MMIARMETSATAAAATSAPR
229e12645986out6|ali|phd|phdHtm|315515.11101,123,152,176,227,262MTTAYASALAAMPTLTELAA
230e3154816out6|ali|phd|phdHtm|227545.7238,60,86,145,177,205MSTAVTAMPDILDPMYWLGA
231e13014236out5|ali|phd|phdHtm|200313.4426,65,87,116,162,184MLQPAFKASMAVLLAAAAVA
232e2488146out5|ali|phd|phdHtm|1999113.3826,64,87,127,166,196MNSPLVVGFLACFTLIAAIG
233e3168596out5|ali|phd|phdHtm|292141.3548,115,158,185,243,288MASFAQWVSGARPRTLPNAI
234e12645186out4|ali|phd|phdHtm|266414.3620,69,109,136,220,250MSGIASAALILSLALVVLPG
235e12998476out4|ali|phd|phdHtm|286111.2646,92,114,155,184,224MIGKPRGRRGVNLQILPSAM
236e2641206out4|ali|phd|phdHtm|252444.3850,91,120,169,197,223MTAPAICNTTETVHGIATSL
237e3169716out4|ali|phd|phdHtm|259666.5841,92,123,170,202,245MTGFTEIAAVGPLLVAVGVC
238e3160766out2|ali|phd|phdHtm|2299512.9137,72,98,154,182,225MRGLLPVAGHWVSVLTGLVP
239e12519516out1|ali|phd|phdHtm|278666.4294,121,165,194,232,269MRETSNPVFRSLPKQRGGYA
240e12523956out1|ali|phd|phdHtm|360808.6743,70,99,128,185,209MALRAGARRQPVIGCAAALV
241e13000686out1|ali|phd|phdHtm|2379315.3225,55,88,158,187,236MWSTVLVLALSVICEPVRIG
242e2487586out1|ali|phd|phdHtm|6959110.27143,196,223,280,304,345MVESRRAAAAASAYASRCGI
243e2804996out1|ali|phd|phdHtm|481707.9927,64,91,145,167,382MNLLDSTWFYWAVGIAIGLP
244e2907206out1|ali|phd|phdHtm|256040.5652,74,110,139,181,218MSDHLTACAAVHPGPLVSHL
245e3160006out1|ali|phd|phdHtm|393121.4431,66,89,130,153,218MRDAIPLGRIAGFVVNVHWS
246e3328536out1|ali|phd|phdHtm|226949.9518,51,103,131,159,216MILLVPILIITLMYFMFENV
247e2549435in182|ali|phd|phdHtm|58200-0.4134,74,163,260,289MLLALLRQHIRPYRRLVAML
248e2335695in62|ali|phd|phdHtm|20375-7.6748,85,118,162,198MTSAVGTSGTAITSRVHSLN
249e12999075in39|ali|phd|phdHtm|77120-2.81195,238,399,428,737MTTVVDAEVQLTVVSDAAGR
250e11738765in7|ali|phd|phdHtm|20912-1.7151,73,124,164,190MSRSTRYSVAVSAQPETGQI
251e2833735in7|ali|phd|phdHtm|21046-4.1640,102,134,156,200MVAARPAERSGDPAAVRVPV
252e2450275in6|ali|phd|phdHtm|34411-1.2285,120,149,291,325MNSITDVGGIRVGHYQRLDP
253e3165445in6|ali|phd|phdHtm|54912-1.4276,108,163,185,277MDAEAFVGFRQVPAARYGGL
254e2450125in5|ali|phd|phdHtm|54112-1.2778,110,165,187,276MSAKKSTAQRLGRVLETVTR
255e2450135in5|ali|phd|phdHtm|53512-1.6974,109,166,188,278MPAKKTMAQRLGQALETMTR
256e2450145in5|ali|phd|phdHtm|56720-2.3574,107,166,188,277MPSEKATTRHLPGAVETLSP
257e2551515in5|ali|phd|phdHtm|20186-8.5649,75,115,154,184MMTLKVAIGPQNAFVLRQGI
258e3160215in5|ali|phd|phdHtm|34450-5.3855,98,122,158,322MKFVNHIEPVAPRRAGGAVA
259e3168765in5|ali|phd|phdHtm|23526-2.7739,83,107,160,187MAANAGSVRPNRRARPMIGI
260e12998445in4|ali|phd|phdHtm|47010-1.5055,92,234,337,419MNGARGNSGVILSQILRGIA
261e12459795in3|ali|phd|phdHtm|36672-7.4938,60,125,210,259MSLLFDFFSLDFIYYPVSWI
262e12999465in3|ali|phd|phdHtm|34960-6.6836,97,246,300,332MLFAALRDVQWRKRRLVIAI
263e3066505in3|ali|phd|phdHtm|58800-0.8983,137,513,535,575MAPFGFTPKARHNRGVALRS
264e3168905in3|ali|phd|phdHtm|19517-1.9753,76,106,128,173MCHTAPMEPSPVVSPLPRLL
265e2641545in2|ali|phd|phdHtm|28284-8.6363,100,136,186,276MTTTSAPARNGTRRPSRPIV
266e12377505in1|ali|phd|phdHtm|27990-11.71131,187,209,236,270MTSSNDSHWQRPDDSPGPMP
267e12519485in1|ali|phd|phdHtm|58740-4.3966,97,131,173,211MTEPAAATTTNASDEPATGA
268e12524475in1|ali|phd|phdHtm|27394-9.5352,112,172,202,262MSAPTANRPAIGVFTPTRAQ
269e12525155in1|ali|phd|phdHtm|25672-7.4421,49,121,150,213MVTSVSALAVAVVHSVAFAI
270e12546285in1|ali|phd|phdHtm|28095-9.7784,124,184,230,270MSYDVTIRFRRFFSRLQRPV
271e12546295in1|ali|phd|phdHtm|25475-7.8968,107,163,207,247MIQQLAVPARAVGGFFEMSM
272e12565065in1|ali|phd|phdHtm|27153-5.6571,125,168,220,263MTAAKALVSEWNRMGSQMRF
273e12565125in1|ali|phd|phdHtm|43700-0.9232,54,99,283,307MLHLPRRVIVQLAVFTVIAV
274e2641465in1|ali|phd|phdHtm|25432-3.7954,99,179,208,251MWTMVLLLGLGMAIDPARLG
275e2642215in1|ali|phd|phdHtm|21032-3.2829,53,81,169,208MIHDLMLRWVVTGLFVLTAA
276e2665775in1|ali|phd|phdHtm|31902-0.30111,172,200,238,276MHRPPWLAQLRRRLRIGVQL
277e2834425in1|ali|phd|phdHtm|42830-3.4952,154,195,301,334MEETSVAGDPGPDAGTSTAP
278e3012575in1|ali|phd|phdHtm|34210-1.85148,185,225,266,301MIQVCSQCGTGWNVRERQRV
279e3066555in1|ali|phd|phdHtm|22223-2.6252,75,148,185,207METTTEHRDESTLDSPVSVA
280e3144735in1|ali|phd|phdHtm|24435-3.6427,61,103,139,203MKRYLTIIYGAASYLVFLVA
281e3154795in1|ali|phd|phdHtm|46082-8.39304,334,387,414,450MSIRPAENSTLDIRHVIGIG
282e3241855in1|ali|phd|phdHtm|26595-9.6074,115,174,215,256MTTHAVIITYLRDQTQPAVD
283e2503525out207|ali|phd|phdHtm|859000.58118,311,348,439,538MARGLQGVMLRSFGARDHTA
num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
284e3006385out30|ali|phd|phdHtm|1172505.96104,153,199,228,288MGLHLTVPGLRRDGRGVQSN
285e3303225out22|ali|phd|phdHtm|8829112.8930,91,131,172,227MTTQTLIRLILGMSMTAVVG
286e13000415out19|ali|phd|phdHtm|1436000.001097,1120,1143,1191,1221MSAAAVAWDQLAMELASAAA
287e2561455out11|ali|phd|phdHtm|5739212.74407,432,455,510,534MASSSAPVHPARYLSVFLVM
288e12524255out10|ali|phd|phdHtm|229111.5040,62,93,138,181MRNAWRLVVFDVLAPLATIA
289e2485525out10|ali|phd|phdHtm|2029013.1151,83,105,129,173MPDEPTGSADPLTSTEEAGG
290e12646175out9|ali|phd|phdHtm|2299610.6838,76,99,158,197MHYLMTHPGAAWALTVVHLR
291e3209325out7|ali|phd|phdHtm|223151.5350,90,119,154,204MNANRTSAQRLLAQAGGVSG
292e12166145out6|ali|phd|phdHtm|262303.2873,101,159,195,226MSARRIRSWKRFDNRSANAA
293e12646165out5|ali|phd|phdHtm|239919.7051,96,118,167,205MNFLQQALSYLLTASNWTGP
294e2551815out5|ali|phd|phdHtm|275101.4883,133,190,212,245MNETPHAPVVEQVLVAAAFG
295e2663925out5|ali|phd|phdHtm|218161.0440,71,132,162,192MDVEALLQSIPPLMVYLVVG
296e3151115out5|ali|phd|phdHtm|306232.16100,154,183,245,292MSGGLFGLLDHVAVLARLAA
297e2351775out4|ali|phd|phdHtm|313414.7274,96,172,222,309MFASTWQTRAVGVLIGCLLD
298e2576885out4|ali|phd|phdHtm|209606.6238,60,104,149,178MEPVLTQNRVLTVPNMLSVI
299e3006315out3|ali|phd|phdHtm|268212.0184,113,136,184,227MIYRVACLLARIRFTVGYVA
300e3171365out3|ali|phd|phdHtm|2469415.0627,74,112,147,210MAVLDLVEIFWDAAPYVVVA
301e12532675out2|ali|phd|phdHtm|448000.90160,248,344,375,410MSRDDVTIGIDIGTTAVKAV
302e12532535out1|ali|phd|phdHtm|295808.7637,81,110,157,203MEVFHWLQHDIVDRGRLPLL
303e12997325out1|ali|phd|phdHtm|3359113.4535,84,152,195,328MTLPLLGPMTLSGFAHSWFF
304e12998695out1|ali|phd|phdHtm|1075818.76107,976,999,1021,1068MLWQSGLRDPTPPGGPHGIE
305e3014575out1|ali|phd|phdHtm|439919.1952,100,224,256,430MTVELAHPSTEPLGSRSPAE
306e3065135out1|ali|phd|phdHtm|259818.4076,100,137,194,216MQREIYDGEARLSWVLAALA
307e3065445out1|ali|phd|phdHtm|272414.5041,95,122,163,197MNEVTAGVRELATAIMVSRH
308e3110895out1|ali|phd|phdHtm|224050.6224,48,95,130,190MHIGLKIFIWGVLGLVVFGA
309e3149935out1|ali|phd|phdHtm|308707.7349,103,126,148,296MTTSGTVLATSIAQHWHNFW
310e3160105out1|ali|phd|phdHtm|217525.0844,66,111,133,193MSKLPFLSRAAFARITTPIA
311e3188735out1|ali|phd|phdHtm|589212.6458,241,337,363,391MGFLKPDLPDVDHDTWLTQP
312e2548774in204|ali|phd|phdHtm|63100-0.9868,140,229,326MTAPPGARPRAASPPPNMRS
313e3189884in137|ali|phd|phdHtm|86580-8.33719,758,786,858MPMSQPAAPPVLTVRYEGSE
314e12645834in19|ali|phd|phdHtm|25491-13.6826,63,98,131MGRKVAVLWHASFSIGAGVL
315e2909384in14|ali|phd|phdHtm|26295-11.2943,86,124,174MTAVLASDVIVRTSTGEAVM
316e12645724in6|ali|phd|phdHtm|41380-8.1243,281,324,396MVTTRARLALAAGAGARWAS
317e13010314in6|ali|phd|phdHtm|43700-0.1845,98,252,425MVSYVVALPEVMSAAATDVA
318e3159674in5|ali|phd|phdHtm|40400-0.1939,129,183,250MSPHRAVIEAGPGAIRRLCC
319e3122814in4|ali|phd|phdHtm|30260-6.5838,78,100,122MSTWHRIGTEGEPLTDPLTT
320e12460034in3|ali|phd|phdHtm|34943-4.6736,252,297,330MLFAALRDMQWRKRRLVITI
321e12487864in3|ali|phd|phdHtm|47210-1.78114,202,238,267MSTGEVMGDLPFGFSSGDDP
322e12545904in3|ali|phd|phdHtm|59781-8.3861,90,127,299MCAHEYAEQRSAVSGIEGLL
323e2550404in3|ali|phd|phdHtm|35830-3.26129,161,269,299MGNVAGETRANVIPLHTNRS
324e2576874in3|ali|phd|phdHtm|12198-11.6830,53,86,108MGSDTAWSPARMIGIAALAV
325e2642274in3|ali|phd|phdHtm|30331-3.1060,98,120,153MTYSPGNPGYPQAQPAGSYG
326e3006374in3|ali|phd|phdHtm|48931-3.3046,109,141,335MAQNELVTASTPPAATQPLA
327e3145084in3|ali|phd|phdHtm|14396-9.0737,63,87,118MPVRAPAAVRGAGLIVAVQG
328e3284014in3|ali|phd|phdHtm|16021-2.1546,68,98,160MTHVLVLLLALLIGVVAGLR
329e11729614in2|ali|phd|phdHtm|40483-8.5721,123,336,390MMFVTGIVLFALAILISVAL
330e12999774in2|ali|phd|phdHtm|28631-3.9537,59,165,200MTWHPHANRLKTFLLLVGMS
331e2436474in2|ali|phd|phdHtm|16126-2.9942,64,101,125MTTPAQDAPLVFPSVAFRPV
332e2485404in2|ali|phd|phdHtm|39794-11.08218,263,313,349MQGISVTGLVKRGWMVRSVF
333e3172344in2|ali|phd|phdHtm|30391-9.0934,88,208,252MLQRIARLAIAAPRRIIGFA
334e3322894in2|ali|phd|phdHtm|20453-5.3351,95,121,159MMSHEHDAGDLDALRAEIEA
335e12487574in1|ali|phd|phdHtm|31990-9.2531,70,121,288MPGTKPGSDKPTGRVVVVIV
336e12523874in1|ali|phd|phdHtm|15128-2.3436,85,108,147MRYRDLETVAAPTINVLRVW
337e12525314in1|ali|phd|phdHtm|17402-0.5770,96,121,156MPDFDTGAHSQRFLSLAGQQ
338e12546254in1|ali|phd|phdHtm|35771-7.4237,80,252,327MLNRKPSSKHERDPLRTGIF
339e12998254in1|ali|phd|phdHtm|31613-1.3654,106,221,306MSALAFTILAVLLAGPTPAL
340e12998564in1|ali|phd|phdHtm|14191-16.1835,75,97,128MVKDLDRRLAGCLPAVLSLF
341e12999044in1|ali|phd|phdHtm|13399-11.1122,67,93,130MVATVLYFLVGAAVLVAGFL
342e2335714in1|ali|phd|phdHtm|42960-6.67117,155,225,404MSRADDDAVGVPPTCGGRSD
343e2335734in1|ali|phd|phdHtm|21495-11.3244,81,170,199MVSRYSAYRRGPDVISPDVI
344e2335754in1|ali|phd|phdHtm|13993-10.2028,57,100,125MHIEARLFEFVAAFFVVTAV
345e2494044in1|ali|phd|phdHtm|25643-4.05103,170,195,225MAKNQNRIRNRWELITCGLG
346e2551654in1|ali|phd|phdHtm|24670-7.5932,65,120,235MGAPLRHCLLVAAALSLGCG
347e2665694in1|ali|phd|phdHtm|20620-2.4937,81,126,150MRSRFLPYATTPGRLLAQLI
348e2674044in1|ali|phd|phdHtm|12193-16.1827,49,79,108MRFVVTGGLAGIVDFGLYVV
349e2908814in1|ali|phd|phdHtm|23023-2.9223,49,98,133MTNWMLRGLAFAAAMVVLRL
350e2931264in1|ali|phd|phdHtm|31363-6.2954,244,275,305MAGSDPPTGGPASQAGSDAG
351e3046974in1|ali|phd|phdHtm|18296-12.5036,68,120,162MFDIATRFKNSYGSGPLHLL
352e3110874in1|ali|phd|phdHtm|38721-2.0878,102,151,302MRVAMLTREYPPEVYGGAGV
353e3152154in1|ali|phd|phdHtm|14993-24.3430,75,98,134MTRRLRPGWLVALSAAVIAA
354e3160074in1|ali|phd|phdHtm|14662-6.6840,91,113,135MSIRPTTSPALADQLKDPAY
355e3168554in1|ali|phd|phdHtm|52991-11.6928,79,177,460MWRSLTSMGTALVLLFLLAL
356e3248664in1|ali|phd|phdHtm|13491-14.06