--- -------------------------------------------------------------------------------- --- --- All proteins with at least 3 transmembrane helices in Mycobacterium tuberculosis --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 385 e1202263 3 in 29 3157 1 0 -1.33 2266,2314,2885 MNFPVLPPEINSVLMYSGAG VSGFMNVGQQLSGLLFAGTG 386 e319005 3 in 17 127 2 0 -2.52 37,86,108 MSDFDTERVSRAVAAALVGP TVIPNINAAIEVLGTGTDYR 387 e1299939 3 in 10 411 7 2 -7.54 46,74,120 MHIGGRWGARPAVAAVRRGA DPLAGPPGDAGLAPPAPAPA 388 e279627 3 in 9 280 7 1 -7.99 131,154,268 MTVVVVTDTSCRLPADLREQ ALHVGAGAVGVCVDVGASPP 389 e316012 3 in 7 351 5 0 -5.04 20,73,114 MTWLVLAGAVLLVVLVAFGA LVDVALDNGAARDAGVPQPI 390 e1264614 3 in 6 301 3 0 -3.50 62,188,210 MRAAAAAGREVFGYNRSVEG AAAGRAGGVITSALPSLDSP 391 e257740 3 in 6 307 4 3 -4.38 91,119,168 MAESDRLLGGYDPNAGYSAH DGLALPAGATRDVKFAKQIG 392 e315956 3 in 6 96 0 9 -0.50 26,62,87 MVVFFQILGFALFIFWLLLI SIMVLLLVAFIGMQLAFGAA 393 e248542 3 in 5 125 8 9 -8.48 45,79,122 MTPSTSDARSRRRSAEPFLW LWCYGMAVLGSATAGWMLLT 394 e321099 3 in 5 235 2 2 -2.78 89,111,192 MAVDLDGVTTVLLPGTGSDN GADAAALGSACLAALAEVSG 395 e321109 3 in 5 234 0 3 -0.91 56,82,118 MQTLTVADFALRLAVGVGCG LSLQPGVYAVHWYAGEHAQA 396 e248585 3 in 4 126 9 8 -12.06 45,81,125 MSAYRQPVERYWWARRRSYL LAGHYAAWLVVSVIVAWMVL 397 e1203952 3 in 3 939 2 0 -2.35 186,738,760 MDPHRDLESRAFAGNWRVYQ LDLFRGDNPLSVTTQLRTTW 398 e1299797 3 in 3 452 6 1 -6.05 33,121,208 MGPARLHNRRAGRRMLALSA PTVTGWMLQVARQVFALIAP 399 e255036 3 in 3 310 9 3 -17.53 248,274,305 MTGPHPETESSGNRQISVAE LIAVAVGALITLGPLALLQS 400 e317270 3 in 3 209 4 0 -4.96 23,75,203 MSRLRALSLAAGLVGWSLVS NEAGAVAAVLVQRRSGISTR 401 e1251149 3 in 2 144 9 5 -12.72 56,97,135 MSAPVRQRSHDRPASLDNPR SMLFTLMLGTYVIVTFDPNI 402 e1252475 3 in 2 331 5 0 -5.77 41,63,254 MNPIPSWPGRGRVTLVLLAV HWPTPTAGAHRAPLTNAVSR 403 e241782 3 in 2 94 6 9 -6.92 38,60,85 MNDQRDQAVPWATGLAVAGF GAAVGVAGAWLALLALTLGD 404 e300421 3 in 2 123 9 6 -17.89 30,79,108 MRPRRALAGLAADVVAVLVF AVLLLGWRAAVALMAPHRAD 405 e1173873 3 in 1 270 9 3 -16.18 82,104,183 MAVKAGQRRPWRSLLQRGVD ATDRLVAWAQAFDELGGLPR 406 e1202272 3 in 1 97 9 9 -14.52 39,61,91 MTVRAVFRRTVGAQWPILLV TVTVAAAMVYIASTIDPLGT 407 e1202282 3 in 1 876 1 0 -1.54 64,341,531 MTMFARPTIPVAAAASDISA FGGVRTGRSHARESSQGPNQ 408 e1237610 3 in 1 421 4 1 -4.77 58,262,284 MHIASVTSRCSRAGAEALRQ IYGRRMGARKGSLALSSPPA 409 e1248752 3 in 1 382 2 0 -2.26 284,309,331 MLSTDNRAELGDILTDIGDY GMLAFYRNLAMALVGDHPGA 410 e1248785 3 in 1 340 2 1 -2.48 28,238,301 MNRRILTLMVALVPIVVFGV TLSQAVDALHAMTSGSPTPS 411 e1251148 3 in 1 112 4 2 -4.69 26,69,103 MWSWVCHRISGATIFFFLFV FLLLMVPAGVVVGIHMWEHF 412 e1252521 3 in 1 236 9 0 -9.80 55,158,180 MRYPLAVAQLGFQRARTEEN LTATLLGLLAGSPCECRSPT 413 e1252543 3 in 1 456 9 2 -15.93 74,107,454 MVAHKAEVSGSPPPRLNLST NGTVVGAMAGLAIYAIAQLL 414 e1253274 3 in 1 250 9 0 -11.46 136,190,235 MTMPLRGLGPPDDTGVREVS QIAAVQVVAADTGQVLLQRS 415 e1253935 3 in 1 130 9 9 -15.32 60,85,124 MPTVGPADHAAGLDRRATPD AIAVGTYGVLSAVTTWFGTF 416 e1254626 3 in 1 350 1 0 -1.79 37,214,324 MAGSGVPSHRSMVIKVSVFA DILLPIGGQPDPSKGRCAFA 417 e1299865 3 in 1 462 3 1 -3.52 47,69,390 MRNPLGLRFSTGHALLASAL QLPIRRVSPPEESRYQMALP 418 e241795 3 in 1 446 2 2 -2.49 37,171,348 MNILSRIFARTPSLRTRVVV ASLENSPLGGARLVLRLPGP 419 e247089 3 in 1 487 9 1 -10.74 28,61,455 MPRARWLQSAALMGALAVVL ARLHAVAGPAGGAWVHYLLP 420 e254959 3 in 1 412 8 0 -8.75 107,133,180 MKIRTLSGSVLEPPSAVRAT MAPDDVARVVAAVQEAEVRG 421 e255046 3 in 1 281 3 4 -3.94 28,171,225 MSLKRCRALPVVAIVALVAS DGRVMLDAIRRFLTETAVLG 422 e255069 3 in 1 122 8 5 -8.82 45,73,115 MADDSNDTATDVEPDYRFTL VGLCVVGVVALALVVAKAIT 423 e264095 3 in 1 115 9 9 -13.77 39,78,108 MRVPSQWMISSRVTVAWNIV WPFVGLLALGLVYVAADAVL 424 e264240 3 in 1 440 5 0 -5.12 29,158,319 MTRPRQSTLVATALVLVAIL RGDVTTTLRQAQAAANAATQ 425 e290918 3 in 1 133 3 8 -3.22 26,83,131 MQKLLFTIGLALFLIGLLTG FLLLSLSVAIVIGVVIVIIG 426 e301265 3 in 1 160 9 2 -9.21 20,54,143 MVSLLVHAALGVVVIGWIVS FYFATIERQHRHERSRATVG 427 e306552 3 in 1 125 8 0 -8.70 48,81,115 MHEVGGPSRGDRLGRDDSEV TLMVLTLCIGVPPIAGPVMA 428 e314467 3 in 1 427 8 0 -8.32 83,180,252 MAITDVDVFAHLTDADIENL RGRRRSKRMAKSVTEPDDLA 429 e314983 3 in 1 334 5 2 -5.78 47,86,225 MTDIEVALPFWLDRPDHEAT ALRALRPGGLYGTAGDNDGR 430 e316041 3 in 1 387 2 0 -2.64 28,99,174 MIDTAIEEMIPLIGVRAACA LDLPAPAPVDLRRLLPSGQI 431 e316554 3 in 1 114 8 7 -8.23 21,52,86 MNWIQVLLIASIIGLLFYLL RYARIARALALEGAQAPEQC 432 e316833 3 in 1 392 6 2 -6.90 132,160,182 MSRAFIIDPTISAIDGLYDL ERAPVEADAGGGQKVLVRNV 433 e317166 3 in 1 221 0 3 -0.77 53,93,185 MTEPPGFGGPSEPSGAPRTS AVDPSSNARTEALETPQAPV 434 e321105 3 in 1 352 1 0 -1.11 35,79,283 MTKYRGQFELNRPATLIAAL QRAEQLGIRLPPRRAFGQRA 435 e321793 3 in 1 246 5 4 -5.92 55,92,204 MARSIPADRFSAIVAASARV DDAIAATLAEFVVRATTASS 436 e322882 3 in 1 454 9 0 -11.71 35,349,372 MTTPGKLNKARVPPYKTAGL GSPYAVEYVWGRQVGDNTIN 437 e332416 3 in 1 177 4 0 -4.88 51,82,149 MDHARNVPSATGPQRNHLAL VADRVVAQLTDIAALRGEDA 438 e290944 3 out 63 128 6 9 7.00 24,86,115 MNVYIPILVLAALAAAFAVV FMLTVFVAYAYVWRRGGLTW 439 e291008 3 out 36 99 9 9 11.05 23,47,79 MNPANYLYLSVLLFTIGASG IMTIFRTRKSASVDDANLLK 440 e255022 3 out 35 87 9 9 14.44 18,52,76 MLVLLVAVLVTAVYAFVHAA ASGVYLVDVRPKLLEIQGKS 441 e304546 3 out 13 391 0 0 0.07 79,102,127 MDFGALPPEINSARMYAGAG GAYAGPRYGFKPTVMPKQVV 442 e304553 3 out 11 860 5 1 5.08 422,451,494 MTLLFADLCAIFTPYRWMIE TDTPGGGLTVVIDLAAPEDR 443 e255024 3 out 9 348 0 0 0.34 128,170,249 MTNPQGPPNDPSPWARPGDQ RFSTRDAAIPTGIQNPCFSH 444 e324897 3 out 5 380 0 0 0.20 128,218,269 MDTVLGLSITPTTLGWVLAE PITRVLEHIPGAYGDSAPPA 445 e306532 3 out 4 110 9 6 16.49 28,53,81 MYNELLENLAILVLSGFVGF GMFKAKKPAVPAKPDRDEAL 446 e324341 3 out 4 404 2 1 2.70 64,299,369 MKCPGVSDCVATVRHDNVFA GPGANKALSMVRGLLPKGKK 447 e1264592 3 out 3 352 7 3 7.74 37,139,339 MAVLPACRLGLVVCVATAVI VGAAGGAVVVVLRRRRRAHT 448 e243273 3 out 3 521 1 2 1.56 89,137,213 MLQRSLGVNGRKLAMSARSA FGQVAAAQAAASTIRSADRD 449 e248769 3 out 3 249 3 0 3.09 99,121,149 MAKSPARRCTAKVRRVLSRS QPPGRWVCPSSAGGPIGWHR 450 e276790 3 out 3 215 2 2 2.43 146,169,210 MKLPGAKRLGDDRRPLGTLR APVHDEAALAEVAARVREAV 451 e280730 3 out 3 339 0 0 0.33 159,211,254 MDFDPTAEQQAVADVVTSVL TRLLGGPSHRLELLGARCSL 452 e1237753 3 out 2 207 9 0 13.61 47,69,120 MLTVVAVIGILECGLVLHMP TLNVYRRNSPDGDEPLPADG 453 e1237772 3 out 2 304 8 3 8.79 53,117,142 MSAPAVTEHSWLPRATCGVS VLAGALGQSGQRPGRRHVPA 454 e1254012 3 out 2 129 3 9 3.14 41,80,109 MRLILNVIWLVFGGLWLALG IPVSLVPLGKDIVGVNSQVP 455 e290789 3 out 2 101 9 9 14.40 39,64,92 MDITATTEFSAMNLDGKTGI FFVALGGAVVLLWIVGMVRK 456 e290924 3 out 2 132 9 7 11.86 58,93,120 MPNHDYRELAAVFAGGALGA TLGLLAVHLATVLVRRVRIR 457 e293114 3 out 2 470 8 1 8.25 343,390,412 MTATRLPDGFAVQVDRRVRV GLWYGVVRERNIGALKPQIR 458 e300418 3 out 2 409 3 2 3.87 103,290,367 MPVLRRLGCSVLALGLLAGC LFRKIGAEVAPNDAPPMPPG 459 e313767 3 out 2 358 9 2 34.67 25,255,277 MPSIPQSLLWISLVVLWLFV ESAAPIRNYGWPRDLPRAVG 460 e317120 3 out 2 166 1 7 1.53 59,85,151 MYYLLILAVVFERLAELVVA LANATLLTVRLRVENSVLGY 461 e1248753 3 out 1 145 3 9 3.86 50,83,132 MTSFAHPGTRGLSTVFGLMM PLAAPLAVLATYVLATRPFS 462 e1248754 3 out 1 423 6 0 6.36 47,152,341 MIQTCEVELRWRASQLTLAI MGALPNRRRRGRGRASRARL 463 e1252467 3 out 1 1330 0 0 0.04 62,84,973 MSRLIFEARRRLAPPSSHQG INPLVDAAAVSGETQQKGSQ 464 e1252476 3 out 1 400 3 0 3.52 68,276,299 MSGTFTADAIGPPVPIPDVP HVSQLDYLRRMTVFLQGLMF 465 e250348 3 out 1 120 2 8 2.38 47,79,105 MTAPETPAAQHAEPAIAVER PLLGIVVEHFQTKEIKARFG 466 e250611 3 out 1 386 3 0 3.88 87,231,257 MTAGSDLDDFRGLLAKAFDE VAAGMTPDHDGYAAVVGASK 467 e276872 3 out 1 165 9 3 13.40 49,89,123 MGATAITVLAGAHIVEMADA ICRPPRSFDHQVRAFRRNQP 468 e290745 3 out 1 318 0 0 0.00 71,213,253 MRAGADAPDSGRVKESAPWS INRRSAGVIPGLRYHRTEPS 469 e304690 3 out 1 492 9 0 9.44 47,90,383 MIRAASDDPAGVDELVAAIA AALEAVRAELGEPGAPTTGL 470 e314990 3 out 1 297 8 5 8.33 192,243,286 MRFGFLLNEVLTGFRRNVTM LLGVAMSGLTAYLTLRLYVR 471 e316079 3 out 1 149 9 6 17.38 69,91,128 MHAEGPPSVICIRLLVGLVF GPGRWSLDRRLSKRATACGA 472 e318990 3 out 1 185 3 6 3.34 37,128,171 MLRAVNEIRQHDGTLKLGKG MWALYAWSWHSNGDAVPKGQ 473 e321683 3 out 1 388 3 0 3.67 117,172,320 MSKTVLILGAGVGGLTTADT SREFHEEKVAQELAWLTRWK 474 e332857 3 out 1 393 9 0 9.83 301,367,389 MRMSALLSRNTSRPGLIGIA VLHWIIDYWNRFSLWVQHLV