--- -------------------------------------------------------------------------------- --- --- All proteins with at least 2 transmembrane helices in Mycobacterium tuberculosis --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 475 e241995 2 in 30 431 2 0 -2.04 263,392 MADTDDTATLRYPGGEIDLQ GRPRQIYTGYTERDYVTIDA 476 e317151 2 in 28 393 0 0 -0.83 238,359 MTGPLAAARSVAATKSMTAP ALIRPLSAYCGHEQRVLPGT 477 e241786 2 in 25 373 1 1 -1.30 207,329 MTVVPENFVPGLDGVVAFTT VGPGPRSPESVDGWERVLTT 478 e311070 2 in 23 473 4 1 -4.33 73,196 MLLASLNPAVVSAADIADAV VDALPRNALGKVLKKQLLSE 479 e315005 2 in 22 389 3 2 -3.94 65,219 MTEALIPAPSQISLTRDEVR KHLDGGIAEWTRTIDSSLLV 480 e233570 2 in 21 280 9 4 -25.78 47,275 MTKLGFTRSGGSKSGRTRRR AMWIIGMVAAIGLALWIGAR 481 e266592 2 in 21 485 7 0 -7.96 35,175 MARHLRGRLPLRVRLVAATL SLPRVSDVDQLSLTPVVPGP 482 e304619 2 in 21 275 1 0 -1.29 48,70 MSFLKTVPEELTAAAAQLGT AGFGAPRYGVKPIVMPKPAT 483 e1253088 2 in 17 434 4 2 -4.73 369,416 MLEVAAEPTRRRLLQLLAPG VLDRLIAFTGRQPTAGHVSA 484 e1254622 2 in 17 564 0 0 -0.86 29,298 MIDRLAKIQLSIFAVITVIT GMTGASSAENWVDLMRDPRQ 485 e314512 2 in 16 392 3 2 -3.36 67,225 MSTSLPPLVEPASALSREEV VHLQGGIVAWAKQMQPDMVM 486 e264129 2 in 12 342 7 4 -7.49 248,280 MRLSIVTTMYMSEPYVLEFY AHLSNGKRVTSEPEGLATGN 487 e290927 2 in 11 107 1 9 -1.75 51,89 MIYLYLLCAIFAEVVATSLL KVVGVGLIVVGVVTLNLAGA 488 e306514 2 in 9 340 3 2 -3.91 40,185 MTFFEQVRRLRSAATTLPRR ADIQHVLNGATPPAAPAAPA 489 e316025 2 in 9 410 3 0 -3.37 322,402 MKDTVSQPAGGRGATAPRPA AGQVARAALAVATGAGARTT 490 e324878 2 in 9 325 0 2 -0.90 35,181 MTDVSRKIRAWGRRLMIGTA EYWGAQLNAMKGDLQSSLGA 491 e1254611 2 in 8 655 3 0 -3.31 596,643 MLPNFAVLPPEVNSARVFAG QLLIIISAGRTIANDISAIV 492 e1299962 2 in 7 473 3 0 -3.72 139,325 MTIMAPEAVGESLDPRDPLL KLTEALAQAPARRGRHKNIP 493 e315112 2 in 6 376 3 2 -3.80 92,231 MNQSETEIEILAEKIARWAR EASRELPGRVLLDQPADVSM 494 e1253912 2 in 5 151 9 8 -11.68 37,88 MLKGFKEFLARGNIVDLAVA RHGGRGTPSPTDGPRASTES 495 e290980 2 in 5 240 4 1 -4.79 57,102 MSVSRRDVLKFAAATPGVLG KVGGVGVDVNQILKPQFGQW 496 e279631 2 in 4 316 2 3 -2.90 234,303 MHLVLGDEELLVERAVADVL ADYALESAVRQVAELVADRG 497 e316844 2 in 4 462 5 2 -5.33 103,128 MPRAASAMAEPAMGVGRRRC DLMARLQVESTGGGRRRRRG 498 e1173902 2 in 3 157 1 4 -1.23 32,62 MTRRTLYVQLIIAFMCVAMV RAREAMKTALQLEGRARPGA 499 e249457 2 in 3 504 8 1 -8.00 183,209 MTPVTTFPLVDAILAGRDRN IAYGVARTRLMHAGASESLM 500 e276787 2 in 3 181 9 0 -11.90 140,176 MTPALKEWSAAVHALLDGRQ APVHDEAALAEVAARVREAV 501 e304702 2 in 3 421 4 3 -4.71 27,339 MLRFAACGAIGLGAALLIAA SAQPPPPPDAGHPDPGPPER 502 e317139 2 in 3 232 7 4 -7.03 27,211 MISTTRIDFLWILSVAFASM GCRGFSTSLLAKRNHPVIVG 503 e318867 2 in 3 117 7 9 -7.50 59,113 MAGVTAAVSARLKADEARRP LFVTGIWLVSIIGVALLIKY 504 e1264546 2 in 2 110 7 9 -7.14 54,76 MVYTGSDAGDHASAPQPSGS TPAGETASFPTGWRGLRFST 505 e1264577 2 in 2 241 0 2 -0.30 25,98 MIVGVLVAAATPIISSASAT KYANALVRGVAGFLATQGQA 506 e233595 2 in 2 250 9 3 -25.35 64,90 MAKPRNAAESKAAKAQANAA PKGPLPTTAKMRSVQRTVRR 507 e249453 2 in 2 282 1 6 -1.52 193,231 MLAQATTAGSFNHHASTVLQ PDNASRGRRRGHLWPTDGSA 508 e255157 2 in 2 147 3 3 -3.59 30,108 MRMISVSGAVKRMWLLLAIV VKDERSETSPRALTSCQVSS 509 e306654 2 in 2 229 4 1 -4.94 73,205 MLRADPVGPRITYYDDATGE ANPDPAMLQRRIATEKVTRV 510 e306710 2 in 2 394 5 2 -5.96 92,256 MTSIQQRDAQSVLAAIDNLL ERAYVIFGNHEFGLPPGDTM 511 e316881 2 in 2 146 9 3 -12.53 104,126 MGLRPARVVRPARSGMLKGV ALLILTDKVGDPWGRPLRDG 512 e324266 2 in 2 402 0 2 -0.25 46,187 MRCGVSAGSANGKPNRWTLR DVRYTPNPNDAPGGPLVERA 513 e1202262 2 in 1 85 3 9 -3.38 48,75 MTVRAVLRRTVGAQWPILAG TVTVAAAMVYIASTIDPLGT 514 e1202289 2 in 1 446 4 2 -4.00 137,195 MAQLTALDAGFLKSRDPERH RALPSAARRGRPSVPTARAR 515 e1216604 2 in 1 366 6 2 -6.67 328,361 MFPGFDALPEVLRPVARPQP IGGMVLICLFLYHVFRNRNW 516 e1237571 2 in 1 123 9 9 -20.28 34,105 MTDRSREPADPWKGFSAVMA WVLIAYLRAEVRRRRDYRVS 517 e1248791 2 in 1 355 9 3 -14.72 58,122 MAGSWRRLRGLNEKLTAQPG APEVDAIEASDRLLYIRQVG 518 e1252439 2 in 1 280 1 3 -1.41 81,220 MTQPSGLKNLLRAAAGALPV DLTLRNMAKGYPHLTATVRG 519 e1252459 2 in 1 306 0 1 -0.43 63,245 MAISLVAHQPIPHVERPMAD FPFNLMLWDLDRRMRRGRPL 520 e1253242 2 in 1 134 9 7 -12.64 60,86 MPLSDHEQRMLDQIESALYA KGAGGSFTSRMEDRFRRRFD 521 e1253244 2 in 1 227 9 2 -11.33 28,207 MARTRRRGMLAIAMLLMLVP LAWIDRDRSPRLTASGDPPT 522 e1253963 2 in 1 684 2 0 -2.00 190,357 MSDGESAAPWARLSESAFPD SPPTKLPEDLTVTNAADTTC 523 e1254594 2 in 1 435 9 2 -11.67 53,81 MKRGFARPTPEKPPVIKPEN RLAEAYEEIGQRVAHIGARD 524 e1254608 2 in 1 406 7 1 -7.89 31,68 MKAQRSFGLALSWPRVTAVF DELVLPVGQELEHATSSFVG 525 e1264120 2 in 1 480 9 1 -9.65 61,319 MGLRLTTKVQVSGWRFLLRR HDTLPADPSPRKVPAGASGA 526 e1264529 2 in 1 172 8 8 -8.12 87,118 MSKIDRKNGVPSTLTTIPLA TPVTPKPVTSDRATPVDPSG 527 e1264530 2 in 1 327 2 2 -2.67 68,151 MAAPDPSMTRIAGPWRHLDV EAPEEVNRHLMRFLEQVHQL 528 e1264620 2 in 1 100 5 9 -5.29 42,81 MPGSVPGKAPEEPPVKFTRA GTARILQLRRAAKKTHAAAL 529 e1299753 2 in 1 175 1 9 -1.51 34,95 MSRLLLSYAVVELAVVFALA VEPLTLQPPRVAAEPPSPGS 530 e1299841 2 in 1 406 3 0 -3.33 368,401 MASVAQPVRRRPKDRKKQIL DEISGLALAILTSGAGNLLR 531 e1299852 2 in 1 371 6 1 -7.00 181,282 MQASDRTWQSNFIRRWYFTE LRTAGVRGEDAAEHLREAMT 532 e1299940 2 in 1 180 9 0 -16.93 58,80 MSKPFAPRRLYTPRTSRTLA DPDVAQPRVADEAEQHAKKS 533 e1299961 2 in 1 255 9 2 -11.18 192,242 MLLPAANVIMQLAVPGVGYG FVYQLYLWDMRFRARHGRRI 534 e1299975 2 in 1 326 8 2 -8.00 237,259 MIPVLPPLEALLDRLYVVAL RRQWWIDRVKACYSLLVPSF 535 e1300033 2 in 1 699 9 0 -14.51 32,441 MNGQRGQLSTLIGRTLLGLA LAELWFASEEVAQVNGFIRA 536 e235176 2 in 1 271 9 5 -20.66 29,235 MPRLAFLLRPGWLALALVVV PPPDKPMTVEQKLADRYGRR 537 e235310 2 in 1 265 9 0 -16.87 108,237 MGQIVAGEIGGQRTTPVGGG RRVDRLNDTKTKALTMCVAA 538 e247002 2 in 1 83 9 9 -19.51 48,70 MVVCLIGGVAGSLWPRPAGR IPAVVYGKMRRSRRISSDQD 539 e247003 2 in 1 323 7 0 -7.32 278,307 MLATLSQIRAWSTEHLIDAA LGAALLGVGGSGAAVVNCAT 540 e248783 2 in 1 195 0 3 -0.32 47,169 MARTQQQRREETVARLLQAS PQPELEEQRIPMLTALLTAG 541 e255072 2 in 1 388 0 0 -0.72 39,63 MKALRSSSRLSRWREWAAPL DRYGYDRHTPEPARLRPAVG 542 e265578 2 in 1 154 5 7 -5.23 38,73 MTAAPNDWDVVLRPHWTPLF VAAMDTVRSLLARYRPDLCA 543 e266925 2 in 1 304 9 6 -9.70 228,288 MTAPNEPGALSKGDGPNADG FVYNLITDLIGGIEVTLADR 544 e266931 2 in 1 93 9 9 -24.32 55,87 MPKSKVRKKNDFTVSAVSRT WNYAIAFAFMITGLLLTMRW 545 e267397 2 in 1 108 9 5 -9.38 79,101 MPAPAEKALSQVGFRRIAAD STVSLAETAVAVSGGRLVAP 546 e268218 2 in 1 367 1 2 -1.83 76,180 MSEHQSLPAPEASTEVRVAI SPPEQLPDDIARAQLEEFII 547 e276791 2 in 1 314 2 1 -2.23 257,286 MAARRGGIRRTDLLRRSGQP MGMGAIRVQPLAPREKCVPK 548 e276871 2 in 1 210 9 4 -12.25 60,189 MIATTRDREGATMITFRLRL LIRVRNASWQHDIDSLFCTQ 549 e279652 2 in 1 185 9 5 -15.18 49,74 MAIFGRGHGASEPGGTGEPA RIKVIMDKVNGRWLASKVEL 550 e280496 2 in 1 139 3 8 -3.06 36,97 MLQRTNVVQPLNTLRMVWIQ AVYRGYTASVGRFVPGVGLI 551 e280498 2 in 1 730 9 1 -9.54 58,462 MTSGEALDSVAESESTPAKK AAGTISVGGLEEPIYRLSER 552 e280733 2 in 1 386 9 0 -12.00 81,103 MLSGQAAIVGIGATDFSKNS GVEHVLVTAGTGVPTSGLIL 553 e290751 2 in 1 431 8 0 -8.36 310,350 MSASEHDPYDDFDRQRRVAE TEGRLERIDADQLGVSRNAL 554 e290884 2 in 1 133 9 9 -15.00 34,56 MTRLELRVVVAAVLAATVVL WVDNSGNRANRRIADSDDLA 555 e290954 2 in 1 332 2 2 -2.00 79,267 MNTHFPDAETVRTVLTLAVR TPRRELSQVVEWPEELLRQR 556 e293107 2 in 1 265 9 1 -9.76 41,63 MLARYIKMQLLVLLCGGLVG ASGAVNAAEYESKRAQIISE 557 e293528 2 in 1 159 1 5 -1.32 31,87 MKLTTMIKTAVAVVAMAAIA GPSPTIVAMNNGMEDLLIWE 558 e293529 2 in 1 446 4 0 -4.34 115,413 MDVAGLPRLAAGTQAAIIHG EVPHFGAPYSEPRHEQAASG 559 e301279 2 in 1 91 9 0 -15.91 48,70 MAEKNTRRATSQREAVAKIR ILANNHHNRVLEELGEAMEE 560 e306527 2 in 1 95 5 9 -5.46 47,69 MLTLPDDRAPTGLPDPGIEA SSCWPADPSQHHRIAESRAC 561 e306545 2 in 1 172 1 6 -1.38 42,77 MSYPENVLAAGEQVVLHRHP EVHALLYHEVFDTLGSDESP 562 e312282 2 in 1 495 1 1 -1.94 62,410 MPLSLSNRDQNSGHLFYNRR RDTVPTLGQVAIVTTTAKAG 563 e312283 2 in 1 1396 9 0 -11.74 59,85 MSKKAFPINRVNIDPPKPVR VGADGDVEGILVGYPSVPGE 564 e314478 2 in 1 567 9 2 -12.95 54,233 MIFGSRRRIRGRRGRSGPMT QPMPPEYKERQRPREHAEWS 565 e314981 2 in 1 295 7 4 -7.79 20,57 MTWQIVFVVICVIVAGVAAL ISPLGCWPGSSALPTIAVPG 566 e314985 2 in 1 379 9 1 -9.39 62,106 MHRRTALKLPLLLAAGTVLG RPYRDGEVQTIRKLNGMPSQ 567 e315170 2 in 1 412 3 2 -3.61 67,118 MDDGVWILGGYQSDFARNLS LNFGGSTATTVSFVVSTTRG 568 e315970 2 in 1 110 7 9 -7.58 67,93 MPGVITNSESPTAADHDRIT GLPLAYYAARYNIDLDLIYP 569 e316035 2 in 1 358 6 0 -6.00 111,273 MLTGNKPAVQRRFIGLLMLS LYVVSGSGAGVQVIEHAAGT 570 e316056 2 in 1 470 9 0 -12.77 40,62 MPSPATTWLHVSGYRFLLRR SGPELSRANASVARDTVAPG 571 e316801 2 in 1 171 3 6 -4.00 49,152 MISPKPLLHILIHGLSDELP VVLAVLDKRLERRENSASAT 572 e316857 2 in 1 105 8 4 -8.77 36,67 MSEAPNDKTTRGVVDILVYA RRAERERLRARLRGESLPEE 573 e317165 2 in 1 446 0 1 -0.29 265,436 MVEPGNLAGATGAEWIGRPP ARLAVIAAKVITGRKLSRRP 574 e317187 2 in 1 94 5 9 -5.32 52,81 MVTMTSWPSRLFAFTDNVCP VITVTSIAGYAIAGFSERYW 575 e324874 2 in 1 103 9 9 -11.02 50,76 MIMCEGRPTESPIPRWLRFV SGAEIPEAYWRTLVDYRSAN 576 e324877 2 in 1 186 2 7 -2.51 52,176 MQPDAYPVRVRGDLDPALSR LLVAVVALLFTGRYPIGLYN 577 e318984 2 out 46 133 9 0 13.85 95,117 MVINRSIASIDSIAVAGSAA GLRNVVGARNLRVGNLGRVS 578 e243649 2 out 45 81 8 9 8.11 31,74 MDPTIAAGALIGGGLIMAGG EAAYFINLAFMALFVFATPV 579 e1254617 2 out 40 99 2 8 2.38 45,90 MAFVLVCPDALAIAAGQLRH MLGASADSYAATEAANIIAV 580 e1251957 2 out 37 240 4 2 4.41 162,219 MTEQPPPGGSYPPPPPPPGP LWDAKRQTLADKIMTTVCVP 581 e266403 2 out 35 81 2 9 2.61 47,72 MSGHALAARTLLAAADELVG AAVLFAATAAAAAAVDRGDP 582 e233576 2 out 33 363 7 3 7.34 92,137 MTPRGPGRLQRLSQCRPQRG LAVTTHPFDTRRGELAPQPV 583 e1251165 2 out 22 281 5 3 5.66 25,120 MFTGIASHAGALGAALVVLI DGPVEPSPARPMPPGFIRLA 584 e1203945 2 out 11 308 0 2 0.06 44,105 MSFVFAAPEALAAAAADMAG WIRGFLPPLPPISPPGFPSL 585 e280794 2 out 11 479 1 1 1.30 86,112 MADFLTLSPEVNSARMYAGG AGYSQYAPTAGPYFSHGNLV 586 e316864 2 out 9 362 4 0 4.91 98,145 MLGGSDPALVAVPTQHESLL RGIGKVDRAALVRRFAGEAD 587 e275146 2 out 7 439 4 2 4.82 104,421 MTGRRLARFPAFRAGVAQDD LAPGLVLSSASPMRTPLQEA 588 e300411 2 out 6 470 9 0 28.10 408,437 MTLSSGEPSAVGGRHRVVII QAQGALAAAEQAEHAEQEAA 589 e316863 2 out 6 220 5 5 5.86 66,145 MSCLPVSVLVVAKAPEPGRV LVRDCCAPGSRFAQATRAAG 590 e316977 2 out 5 92 6 9 6.34 30,69 MSAWFNYTATLKILIFSLLA YIARDFIAHHTGWAFLGATP 591 e290726 2 out 4 463 9 0 16.61 407,429 MSPQQEPTAQPPRRHRVVII EQLAELAAEAQGSAASAKVA 592 e1264560 2 out 3 390 9 4 11.77 62,91 MRRSGANSPAGDSLADRWRA DDLDAFAEALVAATAATSGE 593 e283385 2 out 3 418 2 2 2.57 303,414 MSPAEREFDIVLYGATGFSG GDALLARLPGAGVVMGTTRL 594 e1252530 2 out 2 79 9 9 22.30 46,70 MLVGNAIGLLAGVACSVLVH ILALAPGWFGVLVAIQVASS 595 e1264553 2 out 2 440 5 0 5.74 39,275 MILTGRTGLLALICVLPIAL PAEIAPGLADRYLAMKATGR 596 e1300001 2 out 2 115 5 9 5.31 43,72 MFLAGVLCMCAAAASALFGS ETASPTANCVGSCAVCTQAC 597 e266934 2 out 2 491 5 0 5.03 26,460 MNASLRRISVTVMALIVLLL GGALAAPIGRAVIEAALQGE 598 e306560 2 out 2 354 4 1 5.00 92,267 MAGDRGADPGPANVTPGADD GPDFWVTVVGPAQPTAAEAN 599 e1203944 2 out 1 120 5 2 5.20 42,103 MVVLALLTVDGVVSALAGAL AGAVPPAWVLWRRRVQADGS 600 e1216599 2 out 1 175 1 2 1.47 106,132 MTSPFQPRQVPGSTPAAAGA DVLCDPQNAEKARDLLARLA 601 e1237749 2 out 1 112 1 2 1.47 35,60 MAHFAVGFLTLGLLVPVLTW TFATLPHLTEASSGRVPNPY 602 e1251137 2 out 1 394 6 2 6.00 110,206 MPAASASDRVEELVRRRGGE LAQTPDERDRVLAAQQRRAA 603 e1251143 2 out 1 308 4 2 4.82 135,193 MTGPPPSLPERIRTDEADVL IEDWDAILAACALDIGKRRG 604 e1251938 2 out 1 354 3 3 3.18 148,335 MTMSLRVIQWATGSVGVAAI GIQSFFDLPLITGRAAPGLA 605 e1252023 2 out 1 105 5 9 5.95 38,95 MHFAFIAYVLAGGFLALRWR QLVMFAIVAASWTLYLWLPR 606 e1252407 2 out 1 386 7 3 7.14 133,376 MAILRGRAPLRLGLGGGGTD GILLCAGCVLATSHSTWRVP 607 e1252533 2 out 1 97 9 9 13.41 58,92 MTRRASTDTPQIIMGAIGGV AFSLPIPPVVLTVAVLADIY 608 e1253255 2 out 1 247 2 3 2.36 59,155 MWYYLFKYIFMGPLFTLLGR GGAGANPNSTDAARIPETAA 609 e1254624 2 out 1 451 1 1 1.80 34,114 MMGRVAMLTGSRGLRYATVI PGPAPAPPAPGAGPGEHGGG 610 e1256518 2 out 1 348 3 1 3.00 169,267 MSQTPATTRKTFPEISSRAW AASNAADSLGRKITEWRQPS 611 e1264516 2 out 1 68 9 0 12.50 28,52 MLVITMFRVLVARMTALAVD TGDSIVSALNRIIGRALSTK 612 e1264550 2 out 1 217 1 0 1.62 72,165 MPSIDIDREAAHQAAQRELD SPAVVSAVQHPAVFDSWAQV 613 e241988 2 out 1 91 0 9 0.80 48,70 MSVENSQIREPPPLPPVLLE AAARRGARGAQAGLETYLDP 614 e255026 2 out 1 451 7 0 7.47 50,183 MVIRVLFRPVSLIPVNNSST VTPSDAPTPSGTPTTTNGPG 615 e255068 2 out 1 109 9 9 17.06 68,105 MNRHSTAASDRGLQAERTTL VHILATAVLVLMVVTAFAQL 616 e264106 2 out 1 346 8 1 8.61 63,117 MAGVSEAERRGHRKLVRFQA HSVAGVGPPPYARSGPASAT 617 e264108 2 out 1 288 9 1 17.00 84,106 MRFSYAEAMTDFTFYIPLAK EPLQTKIRNLEMFAENVIAK 618 e283438 2 out 1 214 3 0 3.48 54,76 MSGTPDDGDIGLIIAVKRLA DLTAARQLGVGPATARAVAH 619 e311068 2 out 1 304 0 3 0.50 165,187 MAVAIARPKLEGNIAVGEDR LGRGEEILSTLMQIWDRDLR 620 e315865 2 out 1 260 3 0 3.11 82,136 MEHDVATSPPAGWYTDPDGS TVTVDFGSQFCQGERLAGQR 621 e316882 2 out 1 132 2 6 2.02 93,118 MEASGRQRRYAAAGSVVLLA VIAWTVLRNLPGFPLVPTIS 622 e319006 2 out 1 262 0 1 0.87 173,237 MQSSSLDPVASERLSHAEKS AVRRTGSGETITPSFVLPMD 623 e328408 2 out 1 67 0 7 0.00 35,60 MLRRGESIIRNRYASKPPLY GYAAAAIIGVIGFALAFRDL