--- -------------------------------------------------------------------------------- --- --- All proteins with at least 10 transmembrane helices in Mycoplasma pneumoniae --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 1 P02_ORF660 15 out 1 660 0 0 0.50 35,68,90,116,182,213,247,324,382,415,438,468,500,549,627 MLNKIKLQQKRKLIIGWSVF QTKVTKLQQLLKINPQLDLN 2 C12_ORF651V 13 in 6 651 1 0 -1.92 39,89,132,163,220,285,322,388,437,477,505,560,629 MKQKIKSRLKKDNWLRYLSQ FSFNKQKWLQIKSKLQLWKK 3 F10_ORF491 12 in 5 491 6 1 -6.55 42,64,116,147,179,222,261,306,368,402,439,471 MAVASKKFTERQFLFFVVNY MTQEYKRNKQKESYVTPRAV 4 F10_ORF503 12 in 4 503 8 1 -8.25 45,67,125,157,185,228,266,320,378,423,459,485 MSHQEQLHKPNRQQFSEKQF GFFIHSEIKHKGQLVKSVEC 5 K05_ORF499 12 in 3 499 1 0 -1.43 75,116,171,208,231,270,292,323,370,402,440,471 MVIKFVPHGPLNPDSIFTDQ MDKYFAQKHKSRIVQFIERY 6 A05_ORF475 12 in 2 475 9 0 -12.93 39,75,105,137,181,217,271,299,341,368,408,454 METKLSLKKRLQQFSKKQLI NTWELKRLGKTDYRWRTLDN 7 F10_ORF565 12 in 1 565 8 1 -8.42 28,62,114,155,187,249,289,335,390,442,486,531 MKQQKPKISFIAAMLIVIGS GSLANYQQYVQQHLAHSTIN 8 R02_ORF469 11 in 5 469 6 0 -6.39 30,121,161,188,248,283,324,347,388,426,457 MVVKFGYRHAVMIMMGLMCV ITQWQFLIANKAKNRYADLL 9 A05_ORF542 11 in 4 542 3 0 -3.39 38,99,129,156,231,255,305,371,396,422,529 MTSLFFYQISDKQKRWNWYW FEVILMAVRLNKLKVWQRHL 10 F11_ORF887 11 in 2 887 4 0 -4.91 454,500,552,584,662,700,726,752,814,836,858 MITDVNGFLNNIEKSYANSL KQMFKEVDQIEEQLISGINS 11 R02_ORF564O 11 in 2 564 8 1 -8.89 19,95,193,239,266,325,376,422,444,478,520 MLWAIVLLGYLLFVVEWFVI LNQWQFLVASKEKNRYADLL 12 GT9_ORF477 10 in 31 477 9 2 -12.41 50,99,147,181,212,252,305,345,404,429 MQAKPTTAVKQKQNFGQRLF TAQQDKEEQLRAETPGIGNL 13 GT9_ORF940O 10 in 31 940 7 0 -7.00 60,103,126,189,228,270,506,536,561,615 MQIKAQDTGQQKKSCLLSNI QRGEIKVGQPIFKLVYKKSQ 14 E30_ORF395 10 in 4 395 7 0 -7.40 36,93,134,168,204,226,262,318,340,378 MDLKDNSFAKKRSTVFVVLL AGISSNQRLLMEPNTYFSAV 15 H08_ORF369 10 in 3 369 9 1 -9.48 22,44,67,138,176,223,255,286,308,343 MKWKLFYFFTLLTFTPAYFF LWCRYWVNSPAVKPTAQPSR