--- -------------------------------------------------------------------------------- --- --- All proteins with at least 4 transmembrane helices in Mycoplasma pneumoniae --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 43 D12_ORF623 6 in 58 623 8 2 -8.72 40,105,177,199,286,326 MGLVLKQFNRKIRTALILAP DIYVKMKQAQKDQGGDFDAV 44 G07_ORF376 6 in 7 376 9 3 -12.90 65,188,228,257,311,358 MDKHQKFDQSLFQRVDINVL VSTRVFANALNDAIDPRVIR 45 A65_ORF266 6 in 2 266 9 3 -16.35 42,78,110,168,202,250 MKKTIGLAYRFFYLNNNCDF LWGLFVINNRYYGAKTKYGK 46 E07_ORF329 6 in 2 329 9 4 -10.35 49,114,153,202,246,302 MFKWLLKHRSKPTPLELGIF LIEWAQWKIKRHYVQTKLNL 47 K05_ORF251 6 in 2 251 9 1 -12.56 43,79,105,139,173,229 MEQNNCKIRTWFAKLALAQK CKLLNRPLKAQFKCATNKCP 48 D09_ORF286B 6 in 1 286 9 5 -14.55 30,81,119,161,205,269 MKLSKKYLLAVPFFVLMVIF FAPRIVRLIQTKCLKYRRVN 49 F10_ORF741 6 in 1 741 9 1 -12.50 56,94,136,178,204,730 MKLFKNWSDVNNVKQRQLLL LVVTLGLLVGSFFAYQKRDI 50 K05_ORF385 6 in 1 385 3 3 -3.40 58,133,168,246,288,351 MPLNLNKKHKELKTTFNPFW VKRRTRRRLTYSKLEQMLER 51 H91_ORF239 6 out 6 239 1 5 1.99 27,84,119,155,180,218 MNAASAIALLIVFSLVIGYL LHRKNIHRLLNKTENKVTQL 52 R02_ORF264 6 out 2 264 9 4 9.19 19,64,114,165,200,236 MLLGLGIVVLIYSLIALSVS WRKRIQAMEACGEDCDACVE 53 F10_ORF750 6 out 1 750 8 1 8.07 18,46,95,140,162,742 MFVLLMLALVMLFIVQSSTN LFLTVVLLAIAFFFFKYRNV 54 D12_ORF634 5 in 59 634 6 1 -6.57 67,128,222,316,348 MLSSCRAVTSMSRWSKHKKT NHEQLMRQNGFYARLKRSAV 55 A65_ORF227 5 in 4 227 1 5 -1.25 44,78,133,179,212 MRSPFPVPMVPLTIKTWQKK LVSFGIYAQQIYKTIKVKVK 56 D02_ORF660 5 in 4 660 5 2 -5.58 168,208,288,310,415 MKIIYQEQPNECGICVLGML DLRFVNSEQDLINLSPYLQQ 57 C09_ORF172 5 in 1 172 4 4 -4.03 36,59,81,104,133 MKLSKFLIKLAMCYILIWFR RQQLISSKRPFVALLINELH 58 H91_ORF224 5 in 1 224 1 4 -1.14 50,76,101,123,168 MQVKVIDENSNTTAVLNCAK TNTIKTHSDLPGDIDLEQLG 59 P01_ORF199 5 in 1 199 1 0 -1.60 56,85,117,154,176 MAFLFISNEWKYQQLIFKIN YQPEKVPFLVFFTMSWNSFS 60 C09_ORF223 5 out 2 223 9 0 20.15 46,78,111,145,194 MNVYQTIANFGTNILESLGL KVWVNPKFKKVFALGEQQYG 61 R02_ORF254 5 out 1 254 8 4 8.85 73,124,165,194,236 MNQQLNTTRKSTAARGRMGL DGFYVSAAAKTQLKKQKNYR 62 H10_ORF184 4 in 6 184 9 5 -13.34 46,83,109,175 MAKAPTFFSKLLKQILFANR FIGLFLSFLIQFFKEMKQTK 63 C12_ORF157L 4 in 3 157 9 5 -18.90 33,59,103,130 MYNWTNKKLTKAIALIILVL KNLISKLNKKHVTTGDSFKR 64 H08_ORF448 4 in 3 448 8 4 -8.69 223,283,355,399 MTFSDLLTKLQDNLDIVFNA PFKTDCDPNNDNDLTPPAVF 65 H10_ORF266 4 in 2 266 7 0 -7.78 35,76,137,204 MKKLTQAFLRFCLRFLQLLS QNVANNVWREISQTYAQYCQ 66 B01_ORF203 4 in 1 203 9 5 -12.65 30,62,104,147 MRRNWREHYNVFVANLALVL QTKSKKDGDNPPQASGDMTS 67 H03_ORF152 4 in 1 152 9 1 -9.17 40,63,89,111 MGREVEPIFDLVLLWFLLVP DKEKSKTVVVTIKKKRVKSS 68 H91_ORF258 4 in 1 258 4 0 -4.36 60,93,130,159 MNYSYSFKEYIERFAKKVNS LKRYVEHKQQKIIKIKQFIL 69 P01_ORF243 4 in 1 243 8 6 -8.36 56,116,161,224 MSKINDKLTEINTVEYEVAS LFAFNWNKQRAKAIFCRKRK 70 VXPSPT7_ORF424 4 out 2 424 7 2 7.34 29,89,121,154 MESAPSGGLLALIIISIILL VDSENPEQIRYEIRKKSDVV