--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in Mycoplasma pneumoniae --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 10 F10_ORF328 1 in 62 328 4 2 -4.96 256 MSFKITVLSYCKNSFKKVIR FDDIELVDYDHHPTIKGEVA 11 F11_ORF327 1 in 33 327 6 2 -7.00 85 MSKTIQANNIEALGNAMDLA GEHYQFNLNARILEAVNQLL 12 A19_ORF737V 1 in 13 737 0 1 -0.68 610 VLKLAVGIFISPTLTRFSTG TTFVLRRYDLAGRCTTSTFR 13 B01_ORF1443 1 in 12 1443 5 0 -5.76 1287 MVFDTETEKGKRIWALSQFL AFTQMQLLDEFREQDNQKKL 14 P02_ORF422V 1 in 7 422 9 2 -12.00 419 VRDNIAKGITAGSNTQQTTY ANIGNLTWFEQALLVFGICL 15 F11_ORF582 1 in 2 582 9 1 -28.96 41 MKLNFKIKDKKTLKRLKKGG TVVAELKEKLDRENVFQEIR 16 G07_ORF454 1 in 2 454 5 1 -5.96 136 MKYKTVKSIPLFLLGSIVFT SISDFFKAIFKENGKDTKAK 17 H08_ORF289 1 in 2 289 5 2 -5.36 129 MHSRSKFGIILKFNHFLWPG FFEQPQQFLQLVEQFLNKLN 18 K04_ORF259 1 in 2 259 6 3 -6.00 128 MDSTNQNLFASLSKKGPVRK SLDNASNDNITLNLINLKQW 19 A19_ORF211 1 in 1 211 5 4 -5.46 73 MRIEAANLAGSLWICSVVNH CFWPRFTVGVQPHSNQSRQR 20 C09_ORF143B 1 in 1 143 4 6 -4.00 82 MLTFLHCKVYHQLLQQNKLT QYSAVCKTTFKNVASFLKQL 21 E09_ORF287O 1 in 1 287 3 2 -3.43 32 MLGSMALKLRKWIWASIPSL KDQSFDNEGVNLFPYTLFAL 22 F11_ORF197 1 in 1 197 9 4 -17.27 29 MIFSISKRKLICGFSLVALT NDLTTGKPIRYWDQFEIKLK 23 G12_ORF281 1 in 1 281 9 3 -14.00 204 MGFTKQYKIDFDIIDNQIVL TGKSPQLTSQDWEWLRENGI 24 K05_ORF237 1 in 1 237 1 4 -2.00 143 MANAPKGVKFSTSQTTEEIV LSPVICTHTGLNSYVIVLQG 25 GT9_ORF438V 1 out 10 438 0 2 -1.00 388 VRDNTAKGITAGSGSQQTTY FRLLLANSLLSKSNIYKKTA 26 E07_ORF221V 1 out 8 221 0 3 0.82 207 VLDYVPWIGNGYRYGNNHRG RVGKMITVSLIPPTKNGLTP 27 D09_ORF299 1 out 7 299 3 3 3.31 288 MKISVIISTYNCGALIVKAL FLWMVYQTMLKRYFYLQTTK 28 E07_ORF265 1 out 6 265 8 3 8.20 150 MLASCGAKGRFDQVDDGKIK NYQEVDGGLKGYTFKASVFE 29 C09_ORF351 1 out 3 351 4 2 4.00 156 MKNLTTRQAQILKAIINEYI LKEEIEEYDKQLHGGKTTSS 30 P01_ORF268 1 out 3 268 1 3 1.00 114 MASSKSDPFQSIFAFKPHRK PKLFFDYIGEFLDNIKRNKD 31 D12_ORF285 1 out 2 285 9 3 12.00 180 MAKIKLKNRKALVVYNKTDF RVIIKSSLTHFKHHLKRQMI 32 G12_ORF218 1 out 2 218 9 4 28.00 28 MNGGGQQGGFFGLLVIIIPV KRELAARQLKRQEKKKQKTS 33 H08_ORF102 1 out 2 102 2 8 2.09 74 MLSTAAKSAASNWSTMLVAS RLLPTFWLPAISSAAAKNGK 34 G12_ORF136 1 out 1 136 9 5 9.24 107 MEPNNLKEELVSVFEKACSS QLLKRAFEAVAEKIADYLNE 35 H08_ORF231 1 out 1 231 9 3 24.00 86 MKRADFCIIGLGRFGMQVAH GVNQYLRYINPNDKNKYKAS 36 H91_ORF213 1 out 1 213 6 4 6.00 103 MKRRISTIANLVLQQKPKAF TARLNPSQFDSQVIHVLNKI