--- -------------------------------------------------------------------------------- --- --- All proteins with at least 1 transmembrane helices in Mycoplasma pneumoniae --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 103 K04_ORF389 1 in 16 389 9 5 -10.68 382 MALNLKIGDIVQNKYRIEKL LLALLIAVVSFFIITGVVVH 104 D09_ORF319 1 in 10 319 8 4 -8.80 98 MEQPLCILGIETTCDDTSIG TSDNGAMIGFYANLLINGKN 105 A05_ORF278 1 in 6 278 9 4 -11.00 275 MFGLKVKDAQKDDQKSSEYL ANIGNLTWFGQALLVFGICL 106 H08_ORF270 1 in 5 270 9 5 -12.00 266 MFGLKVKDATVDSSKQSTES ANIGNLTWFGQALLVFGICL 107 H10_ORF506 1 in 5 506 9 2 -12.00 394 MITLIWCQDKHFGIGRDNTI AAHVAKMKQLKLVKNDNGRD 108 C12_ORF385 1 in 3 385 9 3 -18.68 44 MPVFLKLTHTIRKVLRVARL SNIANFWVDDYSLNNQTFGA 109 D02_ORF129 1 in 3 129 9 9 -11.68 26 MKQKIIGLTLAFFVLFLTAV KQGWYNITILLPSKALFETV 110 D09_ORF125 1 in 3 125 6 9 -6.00 115 MEKKKLPFGLKNKEKLTAYN MIGIYFGINHLFIALGVFKG 111 E09_ORF300 1 in 3 300 9 4 -16.00 297 MKLKLLLIPLLGSSLLLSAC TTLCFNSFSPFTVFAVIFTI 112 K04_ORF216 1 in 3 216 2 5 -2.86 26 MTKILPVSTISIFRIILILP NPLFTNKEWKVINPALPSDS 113 B01_ORF103B 1 in 2 103 4 9 -4.24 59 MSSVFSKPNLKRPSFDVKNL SRSGLAYSSSNLSSKSSRLR 114 C12_ORF141 1 in 1 141 1 9 -1.96 65 MDKKYDITAVLNEDSSMTAI AHNTLQGVSQLKINVNVTLV 115 F10_ORF90 1 in 1 90 9 9 -9.68 35 MQRLKKSEAKQVVGGLSFWS FSTGRFRLGLTPGKSSYSFP 116 P01_ORF209 1 in 1 209 4 9 -4.00 205 MGRLEKFRFYRQNDDNNTTV VFFISSLVGLVVLLTLLFTS 117 P02_ORF363V 1 in 1 363 4 3 -4.00 277 MQIRTYKIKDICDIQRGRGI RKKQMQYYQERLFQWIENQK 118 H03_ORF351 1 out 14 351 9 3 11.56 187 MKAYAMLKIGATGWIEKPRP EEALFLMKDKPKDLIKSVVI 119 E07_ORF1218 1 out 13 1218 9 1 13.32 1136 MKSKLKLKRYLLFLPLLPLG APVKPAAPTAPRPPVQPPKK 120 K04_ORF202 1 out 4 202 9 8 16.83 26 MMTVEVFSVIILVLLFLILA LSSNSDRLQDQIIHYLTVKP 121 C12_ORF344 1 out 3 344 9 4 28.21 323 MVFSFQDDTALTVALNSIKL FYKRKKNLKSHKQKAVVKTD 122 VXPSPT7_ORF445 1 out 2 445 9 2 11.96 351 MSDVKYLQVEIVDKNTIRLQ WEEKIRKFEFKLNKDIVKKL 123 A19_ORF1140 1 out 1 1140 9 1 25.50 1116 MKRLQYRFLLFGFALGSFGW HRWRKSRKHFWEQMLKARKV 124 D02_ORF569 1 out 1 569 9 2 18.00 25 MVVIAALLGSLAVLAFLFYL GLISLLGKIKSSAKQHHLDL