--- -------------------------------------------------------------------------------- --- --- All proteins with at least 4 transmembrane helices in Methanobacterium thermoautotrophicum --- -------------------------------------------------------------------------------- --- --- contact: cubic@dodo.bioc.columbia.edu --- www page: http://dodo.bioc.columbia.edu/ --- --- note: all use of this data MUST quote the origin! --- --- -------------------------------------------------------------------------------- --- num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN seqC 86 MTH103 6 in 171 246 4 4 -4.44 27,76,115,163,194,241 MVSLTKRCIAEFIGTFFLVF VIGPVVGAVLAALTYQYLTS 87 MTH411 6 in 61 605 2 0 -2.61 54,98,259,287,582,604 MGCECSSCSPSGNGNEILVM AVGDMGLSLFVITNSLLLAR 88 MTH1163 6 in 9 295 5 0 -5.00 79,105,154,181,246,274 MDPMITGLGVVALMGAAATI ILNNRLEVFARNRYGPYKED 89 MTH1027 6 in 7 233 9 4 -9.82 43,106,145,167,197,223 LMNDKKITSFIALPDLLSML ILFIATLTYIAVPILPKRDV 90 MTH215 6 in 5 204 3 5 -3.34 43,65,99,141,164,187 LMYKVRNMRETEVVISDKTA AMYVGLAEVINETHGRDILP 91 MTH849 6 in 4 403 9 2 -11.12 30,262,288,310,354,389 MNRKVSKFLKDYRVILLIVL VFITRPVYARFIETFNVAGR 92 MTH1172 6 in 3 407 9 1 -11.56 38,63,101,135,175,198 MKENDGAPLKEGETASKYSV VPPEGSSLEEVIKNASMKFS 93 MTH130 6 in 3 222 1 3 -1.94 30,61,98,127,156,194 LHIMEGFLPWQWCLLWYLLS LKLKPDIMEKLQIISKKATE 94 MTH371 6 in 3 245 1 2 -1.03 41,90,118,155,190,221 LVQGVSIMSYDRRFISVVAI SEHPYPSQNRFHPQSPVQPH 95 MTH921 6 in 3 269 9 5 -9.66 34,74,113,145,207,255 LSIERVSIFRGTCRFFAVIF FITIFFLEKMGAYGNEFSGY 96 MTH1538 6 in 2 300 7 3 -7.66 41,74,134,198,252,284 MELKEIKSVRVVPYTIMNSS VTALFYNVLAPRIGAVQIRL 97 MTH1707 6 in 2 217 0 4 -0.41 28,59,94,125,160,191 LHIPDGFIPFPQYLVYWLIA SRPDLFSLRDWGKKGAEVLS 98 MTH1858 6 in 2 631 9 1 -12.29 38,457,495,528,550,607 MRKALEIFWKDMKTVKNSPV KEKMDKRAHWMESKLEESGL 99 MTH1494 6 in 1 208 3 5 -3.79 19,64,89,127,161,198 MISILLFALTSFLIGLSGAM FLILFGVYFLIESLKAISGY 100 MTH1723 6 in 1 204 9 1 -13.05 28,50,85,122,150,186 VVALTKAFDILMAGVISGIV SIFRESVVIVIEDEVSEENE 101 MTH816 6 out 14 341 3 2 3.05 32,54,79,118,141,201 MTSVKIFSVSGIPIELDFSF TGIISRTDIVRTLNLMNKKT 102 MTH1162 6 out 7 233 3 3 3.06 26,60,89,151,189,228 MDPLLLIGAITAGGVLIGGG CLIASIVAGALSTLLVYGGV 103 MTH1428 6 out 5 181 0 0 0.20 18,42,85,118,154,178 MVIIGTVPAGLAGVLFKDFF LYIFAYYCWALGIMILAAAL 104 MTH213 6 out 5 638 0 2 0.41 303,358,460,525,600,632 LTMKKSEITVALAGNANVGK ANLGTALFLGGLFARILPLI 105 MTH1592 6 out 4 227 9 1 9.40 21,57,114,170,194,227 MIDLNIGYVLLCVFIGFLTY TNEHVNLLATVTGAVIGIIL 106 MTH478 6 out 4 235 1 1 1.66 57,98,124,176,199,227 MLHGDRNLNEILTGFIRALE GIILLLISLMVNTALNHFQE 107 MTH1252 6 out 3 222 3 4 3.17 30,72,108,149,177,219 LSSYRKHALLSIIMAIPVFQ FGLLVLVLWAILVIYSLSGL 108 MTH1746 6 out 3 196 9 5 17.00 29,63,86,128,159,192 MQDHIISFTAGILSVLSPCI ASGVLIVVAGIYMLYQLIPL 109 MTH200 6 out 3 207 2 4 2.70 29,62,92,121,160,192 VHIPDGIIPLWQCAVYWAVA NIFIVSFLERMKPELTMMER 110 MTH960 6 out 3 658 3 2 3.86 409,445,491,539,584,612 VSDMFLPARMRKLKIITLDQ MGGKNKFNAFRAERNFTKIR 111 MTH986 6 out 2 199 4 5 4.26 37,60,104,148,170,195 MVPYVNMNMVRFNREEVRDI NPLIWLLAAAAAFGLTFNSM 112 MTH1098 6 out 1 281 0 3 0.80 40,106,154,205,234,274 MNPYIEILRPVNAVMAVITV ALTFIAFAAGSGTITALTGL 113 MTH1427 6 out 1 213 7 0 7.31 32,54,88,117,147,184 MTSGSRWDGIIPHPGILAFA NLTHGPVSWRYFYTHVFSVE 114 MTH1450 6 out 1 205 9 4 15.77 34,60,92,114,166,199 VGRPLDSPLYCITLHGITII IKFLIIAFVILPLLPDTATG 115 MTH390 6 out 1 241 9 2 10.59 50,79,101,157,209,231 MSGEVCDDHPFTVPEKCGGT SKMGLIGVLAREEIREAGGD 116 MTH391 6 out 1 224 9 1 11.22 42,86,111,146,182,219 VMDIASLGGELLGQIPFGDI IHLSSLLVIVRAIEVLLIVS 117 MTH453 6 out 1 252 3 4 3.68 61,95,120,160,201,247 MSHGGLSLDLKAVFSPFTST TFLAFFTVIFASLVIMDGAV 118 MTH1099 5 in 8 246 3 4 -3.85 47,100,133,210,246 VWAGMYPSQPDQVKSKPTYI DNLTACFGAVAAYILLGGMG 119 MTH1409 5 in 6 297 1 3 -1.30 64,88,164,214,297 MSEVSVLLLAVILDLLIGEP LSSLTLILFTLAAAGVMLVI 120 MTH1490 5 in 3 188 9 3 -9.81 32,65,101,128,172 VAVMKKKRLEGLVDAIFAIA TPIAPEYSSTAYAVLILKRL 121 MTH1893 5 in 3 298 9 1 -10.13 36,61,100,133,185 LEESERIRLGKRAAFAGIGG IKIVNVHVCPVGEKSRCLEW 122 MTH620 5 in 3 311 9 1 -9.09 169,193,248,276,307 MVMEFRITERVPTASPGMSS ATILSDFTTTLIYLSVASSL 123 MTH832 5 in 3 209 0 0 -0.08 22,63,126,148,198 LINSSANVIYLILEIIHVSS LVLHLSANIIAYLLGMKDVW 124 MTH132 5 in 2 256 4 4 -4.41 51,89,131,163,250 VRIMNISVDYYAHNNSLRES MIILFDGLLVTGLLFTSGVW 125 MTH1705 5 in 2 261 5 2 -5.67 52,91,126,163,258 MEDLINIERESLKESSIHRL LFAAANIFILALLHILQLGY 126 MTH1812 5 in 2 184 6 6 -6.94 57,82,119,145,178 MDLLSMVLIGVGLAMDAFSI LGGLILILIGLKILLENVSF 127 MTH252 5 in 2 219 5 8 -5.81 45,97,126,155,210 MDSDGGSKMRRKEKYEGTLS VAAFVEANLTLGIYSYIKGS 128 MTH561 5 in 2 192 9 0 -18.12 38,65,127,156,188 MDIRGFLHEYINMSRYVALG LEVVVIGVLIGVVSLLLGGS 129 MTH1179 5 in 1 344 8 0 -8.41 22,45,77,107,303 MKREIQVSVFLTFITLAYYL PVRLGSSCEITVIDLVPFKE 130 MTH1371 5 in 1 355 9 2 -12.63 39,178,234,261,293 MNLLKVAKWELRSTLRSRKF MALQSGCSGGMMWYSVPDQV 131 MTH1779 5 in 1 159 9 2 -15.20 30,57,95,117,139 MDYWKLIRAKEIALLFLIIL YMMESGVNSSSMDPWTPSGT 132 MTH1781 5 in 1 185 9 4 -11.43 55,84,117,146,183 LNRIMNFSRDMILVLASPEE LSVFALPALVITVLMMILGV 133 MTH360 5 in 1 700 5 0 -5.92 50,72,113,151,184 MDIYITLSVLASVFYLGAGM TSNGGAEFRVRFSEIQYKKR 134 MTH1532 5 out 2 194 9 1 10.72 54,92,119,154,187 LGAKELHFMIIDDFNDYKLS NMAGAVMVAALISDYEGKSR 135 MTH372 5 out 2 287 9 4 11.81 36,77,113,140,172 MPSQDYLRVLNPSLSGPTPI GRFSRYAGILPLRYRIQWML 136 MTH1104 5 out 1 291 5 2 5.85 20,192,233,258,291 MRGWVLFIIVLITITCASAA GPFTLLMWLLFLLIRVSLIF 137 MTH1192 5 out 1 242 0 7 0.76 61,113,156,205,228 VTIYIVLPAGIRGGVKDMDI IIYPYIQLFWNRALALRYAY 138 MTH1644 5 out 1 254 1 4 1.85 34,80,126,166,225 MDALFILHASQDPGSIMVAA TGFLEEKIGIENPTSATSTW 139 MTH275 5 out 1 261 9 4 9.13 50,112,164,212,259 MLRTLLRSTRMSWGAKNIHM IYHRVLVTIYMICILVLLFL 140 MTH423 5 out 1 299 9 1 9.84 26,140,162,193,220 MDFFSRLGSAVIALFNIMGT GSVMSMRGNRPVRIIGVEGL 141 MTH481 4 in 171 404 3 1 -3.97 77,100,270,299 MQHMIMLMTRWKNISEIRTE EDILTCALNFNNASVEGGAS 142 MTH422 4 in 6 193 0 2 -0.86 48,75,145,180 LTSYSSSGGEGYRSGEPDNG TAVIYWPLNSNNVVVTNVTR 143 MTH1243 4 in 5 153 9 3 -9.96 28,51,92,138 MSTILKIFAFPAAIFIMCLG MVGLSAIVITFMEFRGEEVT 144 MTH1691 4 in 4 195 2 1 -2.79 64,120,161,184 VPDINESMLNQFRPVIRRFI LAALGYFTMIQRMIYVWQRL 145 MTH569 4 in 4 258 3 3 -3.52 39,62,174,206 MEEKAKMRRLSTWKLKLRMF LSPVQQGRPETGRGCQGLLP 146 MTH905 4 in 4 157 9 5 -9.24 30,59,93,133 MSGVILGRYWGGLSQLIYVI TPKEPYGEEIDIQKAEGWRV 147 MTH385 4 in 3 168 7 2 -7.59 25,95,124,146 MMNELVGVAAAAAISWLNFV SRSSRLLGAIARRMNRYTDL 148 MTH1416 4 in 2 106 9 9 -12.26 20,56,78,104 MYQVIIFALLFAGISSGFIT YACHLSTVTVAAVLAAASVP 149 MTH1817 4 in 2 467 9 0 -11.34 156,178,359,381 VSMIKEFFIGTEISPAYYGE LLQSAGDVIRGLKEAILHMF 150 MTH505 4 in 2 256 9 5 -10.88 32,94,145,202 VKDLQSGLRVLFEVVFLAVL SGVEERLERIEEMLGELRKG 151 MTH506 4 in 2 216 0 1 -0.62 43,92,121,211 VRVSELRSYRWAILAVLAGL VKVTVIGGELLAVTATGTAI 152 MTH128 4 in 1 174 7 1 -7.06 66,95,136,159 MIEFLYPVSGFLMKIADECE LTVLLFLLFEAAYEVGGRIG 153 MTH1434 4 in 1 254 1 0 -1.63 53,198,220,253 VEELKKQKLVDFIAKVMEDS MIKGTIVFFSSLLLLVILIL 154 MTH1437 4 in 1 224 9 1 -22.96 29,137,173,205 MRIRRILRTLTGVLPFAGIM HIYWKQFRGIFRHIKNQISS 155 MTH1703 4 in 1 359 9 0 -16.09 159,181,321,347 MVSIRDIFDKLGGITLTSTK FLFPMLVGFMAFMIKRLEPK 156 MTH1892 4 in 1 168 9 2 -13.02 58,98,120,157 MQVWKMETYYLWPILTVLTI IPLLLILLLVYHRKFSRKSQ 157 MTH237 4 in 1 1321 4 0 -4.04 31,554,890,1315 VNYDKSQGGENMKRFLLIAL AGIIGLFCLLGVGYYFGPMR 158 MTH695 4 in 1 370 9 3 -11.88 37,263,316,351 MRFITLVLKNPFRSRARSLL GGLYPAYRASRLAPTEALRY 159 MTH848 4 in 1 257 9 4 -12.70 120,160,213,242 LRYFSLSSMDSTRVVDLKGG DILTTWLMNLGILRWYLEVR 160 MTH90 4 in 1 130 9 6 -20.00 49,71,103,125 VDIYLIIILILGSGRSMFEI IMTVVAIAALILLTFDQQRR 161 MTH934 4 in 1 149 7 4 -7.95 41,78,105,137 VKMKNKALVEFLGDKEFRNS VAVFLHGLKFVLKFVLKIDL 162 MTH452 4 out 16 184 1 1 1.75 58,109,136,165 LLFRFRDFTTADLAFTGLII MLGALVGYGIINELRRAGAL 163 MTH798 4 out 8 186 7 6 7.19 51,77,138,169 MHPTLLGPDLSVLYFFNSVL LKIDERVKCFGLCRFDRLQQ 164 MTH1546 4 out 2 254 0 1 0.98 40,62,114,235 VARFSQILLQSWVSGVARGS ELMERFDKREEDLHHRHSSF 165 MTH28 4 out 2 188 8 6 8.79 45,122,145,176 MVLEIVYGALNAVFGPFIAM ILCSFAMSQIFRKFMGLKGG 166 MTH813 4 out 2 165 6 7 6.46 42,91,113,154 MKGGESVSDTKIPGLISLIL VFLAFLIGLSLVIDGIGLLM 167 MTH980 4 out 2 313 8 3 8.97 77,235,276,304 MAVVPSALKPMSDALENIIP AYAIFYVIGSFGMTLVSSMA 168 MTH112 4 out 1 164 2 2 2.94 34,110,132,157 VNYRNIMKHSLKTGLSFGLT TAIMIIVITHYAGDWISSTF 169 MTH174 4 out 1 785 9 0 22.67 22,52,84,110 MNPMAIISITAFVVALVSGV SGEDGTRFRLTFGVVPYRRR 170 MTH1830 4 out 1 248 4 1 4.62 26,65,89,111 MTPLLTVETILIIIVTVMVA KYRSVIAGHVKKILRKYREG 171 MTH340 4 out 1 400 2 0 2.49 85,140,237,322 LVKFLVLGVNKDNKGNEALV KMKAWKNGELVKELCDSLGI 172 MTH350 4 out 1 196 9 0 9.23 30,73,95,141 VKLRTHVTAAVVLFLLINFL VNVTSYHTNGSESIFVDFKD 173 MTH483 4 out 1 201 9 6 9.50 45,86,121,144 MNECPENSSWKLKLLTSIRI ADTMFDLLTDLLGGVFGPLP 174 MTH881 4 out 1 168 4 8 4.49 45,92,114,156 MNILQNGEMMLKKGMGLLSV FVGLAVGVILIVYGVAVLRS 175 MTH930 4 out 1 164 5 1 5.80 65,87,114,151 MKINKIHTLTALITLMGLFA LAAMWIKMITDSLITGMAPG