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Transmembrane helices for mettm (Methanobacterium thermoautotrophicum )

Jinfeng Liu & Burkhard Rost

CUBIC Columbia Univ, Dept Biochem & Mol Biophysics

num id nhtm top nali ali|phd|phdHtm len1 riTop riMod topD htmCN seqN
86MTH1036in171|ali|phd|phdHtm|24644-4.4427,76,115,163,194,241MVSLTKRCIAEFIGTFFLVF
87MTH4116in61|ali|phd|phdHtm|60520-2.6154,98,259,287,582,604MGCECSSCSPSGNGNEILVM
88MTH11636in9|ali|phd|phdHtm|29550-5.0079,105,154,181,246,274MDPMITGLGVVALMGAAATI
89MTH10276in7|ali|phd|phdHtm|23394-9.8243,106,145,167,197,223LMNDKKITSFIALPDLLSML
90MTH2156in5|ali|phd|phdHtm|20435-3.3443,65,99,141,164,187LMYKVRNMRETEVVISDKTA
91MTH8496in4|ali|phd|phdHtm|40392-11.1230,262,288,310,354,389MNRKVSKFLKDYRVILLIVL
92MTH11726in3|ali|phd|phdHtm|40791-11.5638,63,101,135,175,198MKENDGAPLKEGETASKYSV
93MTH1306in3|ali|phd|phdHtm|22213-1.9430,61,98,127,156,194LHIMEGFLPWQWCLLWYLLS
94MTH3716in3|ali|phd|phdHtm|24512-1.0341,90,118,155,190,221LVQGVSIMSYDRRFISVVAI
95MTH9216in3|ali|phd|phdHtm|26995-9.6634,74,113,145,207,255LSIERVSIFRGTCRFFAVIF
96MTH15386in2|ali|phd|phdHtm|30073-7.6641,74,134,198,252,284MELKEIKSVRVVPYTIMNSS
97MTH17076in2|ali|phd|phdHtm|21704-0.4128,59,94,125,160,191LHIPDGFIPFPQYLVYWLIA
98MTH18586in2|ali|phd|phdHtm|63191-12.2938,457,495,528,550,607MRKALEIFWKDMKTVKNSPV
99MTH14946in1|ali|phd|phdHtm|20835-3.7919,64,89,127,161,198MISILLFALTSFLIGLSGAM
100MTH17236in1|ali|phd|phdHtm|20491-13.0528,50,85,122,150,186VVALTKAFDILMAGVISGIV
101MTH8166out14|ali|phd|phdHtm|341323.0532,54,79,118,141,201MTSVKIFSVSGIPIELDFSF
102MTH11626out7|ali|phd|phdHtm|233333.0626,60,89,151,189,228MDPLLLIGAITAGGVLIGGG
103MTH14286out5|ali|phd|phdHtm|181000.2018,42,85,118,154,178MVIIGTVPAGLAGVLFKDFF
104MTH2136out5|ali|phd|phdHtm|638020.41303,358,460,525,600,632LTMKKSEITVALAGNANVGK
105MTH15926out4|ali|phd|phdHtm|227919.4021,57,114,170,194,227MIDLNIGYVLLCVFIGFLTY
106MTH4786out4|ali|phd|phdHtm|235111.6657,98,124,176,199,227MLHGDRNLNEILTGFIRALE
107MTH12526out3|ali|phd|phdHtm|222343.1730,72,108,149,177,219LSSYRKHALLSIIMAIPVFQ
108MTH17466out3|ali|phd|phdHtm|1969517.0029,63,86,128,159,192MQDHIISFTAGILSVLSPCI
109MTH2006out3|ali|phd|phdHtm|207242.7029,62,92,121,160,192VHIPDGIIPLWQCAVYWAVA
110MTH9606out3|ali|phd|phdHtm|658323.86409,445,491,539,584,612VSDMFLPARMRKLKIITLDQ
111MTH9866out2|ali|phd|phdHtm|199454.2637,60,104,148,170,195MVPYVNMNMVRFNREEVRDI
112MTH10986out1|ali|phd|phdHtm|281030.8040,106,154,205,234,274MNPYIEILRPVNAVMAVITV
113MTH14276out1|ali|phd|phdHtm|213707.3132,54,88,117,147,184MTSGSRWDGIIPHPGILAFA
114MTH14506out1|ali|phd|phdHtm|2059415.7734,60,92,114,166,199VGRPLDSPLYCITLHGITII
115MTH3906out1|ali|phd|phdHtm|2419210.5950,79,101,157,209,231MSGEVCDDHPFTVPEKCGGT
116MTH3916out1|ali|phd|phdHtm|2249111.2242,86,111,146,182,219VMDIASLGGELLGQIPFGDI
117MTH4536out1|ali|phd|phdHtm|252343.6861,95,120,160,201,247MSHGGLSLDLKAVFSPFTST
118MTH10995in8|ali|phd|phdHtm|24634-3.8547,100,133,210,246VWAGMYPSQPDQVKSKPTYI
119MTH14095in6|ali|phd|phdHtm|29713-1.3064,88,164,214,297MSEVSVLLLAVILDLLIGEP
120MTH14905in3|ali|phd|phdHtm|18893-9.8132,65,101,128,172VAVMKKKRLEGLVDAIFAIA
121MTH18935in3|ali|phd|phdHtm|29891-10.1336,61,100,133,185LEESERIRLGKRAAFAGIGG
122MTH6205in3|ali|phd|phdHtm|31191-9.09169,193,248,276,307MVMEFRITERVPTASPGMSS
123MTH8325in3|ali|phd|phdHtm|20900-0.0822,63,126,148,198LINSSANVIYLILEIIHVSS
124MTH1325in2|ali|phd|phdHtm|25644-4.4151,89,131,163,250VRIMNISVDYYAHNNSLRES
125MTH17055in2|ali|phd|phdHtm|26152-5.6752,91,126,163,258MEDLINIERESLKESSIHRL
126MTH18125in2|ali|phd|phdHtm|18466-6.9457,82,119,145,178MDLLSMVLIGVGLAMDAFSI
127MTH2525in2|ali|phd|phdHtm|21958-5.8145,97,126,155,210MDSDGGSKMRRKEKYEGTLS
128MTH5615in2|ali|phd|phdHtm|19290-18.1238,65,127,156,188MDIRGFLHEYINMSRYVALG
129MTH11795in1|ali|phd|phdHtm|34480-8.4122,45,77,107,303MKREIQVSVFLTFITLAYYL
130MTH13715in1|ali|phd|phdHtm|35592-12.6339,178,234,261,293MNLLKVAKWELRSTLRSRKF
131MTH17795in1|ali|phd|phdHtm|15992-15.2030,57,95,117,139MDYWKLIRAKEIALLFLIIL
132MTH17815in1|ali|phd|phdHtm|18594-11.4355,84,117,146,183LNRIMNFSRDMILVLASPEE
133MTH3605in1|ali|phd|phdHtm|70050-5.9250,72,113,151,184MDIYITLSVLASVFYLGAGM
134MTH15325out2|ali|phd|phdHtm|1949110.7254,92,119,154,187LGAKELHFMIIDDFNDYKLS
135MTH3725out2|ali|phd|phdHtm|2879411.8136,77,113,140,172MPSQDYLRVLNPSLSGPTPI
136MTH11045out1|ali|phd|phdHtm|291525.8520,192,233,258,291MRGWVLFIIVLITITCASAA
137MTH11925out1|ali|phd|phdHtm|242070.7661,113,156,205,228VTIYIVLPAGIRGGVKDMDI
138MTH16445out1|ali|phd|phdHtm|254141.8534,80,126,166,225MDALFILHASQDPGSIMVAA
139MTH2755out1|ali|phd|phdHtm|261949.1350,112,164,212,259MLRTLLRSTRMSWGAKNIHM
140MTH4235out1|ali|phd|phdHtm|299919.8426,140,162,193,220MDFFSRLGSAVIALFNIMGT
141MTH4814in171|ali|phd|phdHtm|40431-3.9777,100,270,299MQHMIMLMTRWKNISEIRTE
142MTH4224in6|ali|phd|phdHtm|19302-0.8648,75,145,180LTSYSSSGGEGYRSGEPDNG
143MTH12434in5|ali|phd|phdHtm|15393-9.9628,51,92,138MSTILKIFAFPAAIFIMCLG
144MTH16914in4|ali|phd|phdHtm|19521-2.7964,120,161,184VPDINESMLNQFRPVIRRFI
145MTH5694in4|ali|phd|phdHtm|25833-3.5239,62,174,206MEEKAKMRRLSTWKLKLRMF
146MTH9054in4|ali|phd|phdHtm|15795-9.2430,59,93,133MSGVILGRYWGGLSQLIYVI
147MTH3854in3|ali|phd|phdHtm|16872-7.5925,95,124,146MMNELVGVAAAAAISWLNFV
148MTH14164in2|ali|phd|phdHtm|10699-12.2620,56,78,104MYQVIIFALLFAGISSGFIT
149MTH18174in2|ali|phd|phdHtm|46790-11.34156,178,359,381VSMIKEFFIGTEISPAYYGE
150MTH5054in2|ali|phd|phdHtm|25695-10.8832,94,145,202VKDLQSGLRVLFEVVFLAVL
151MTH5064in2|ali|phd|phdHtm|21601-0.6243,92,121,211VRVSELRSYRWAILAVLAGL
152MTH1284in1|ali|phd|phdHtm|17471-7.0666,95,136,159MIEFLYPVSGFLMKIADECE
153MTH14344in1|ali|phd|phdHtm|25410-1.6353,198,220,253VEELKKQKLVDFIAKVMEDS
154MTH14374in1|ali|phd|phdHtm|22491-22.9629,137,173,205MRIRRILRTLTGVLPFAGIM
155MTH17034in1|ali|phd|phdHtm|35990-16.09159,181,321,347MVSIRDIFDKLGGITLTSTK
156MTH18924in1|ali|phd|phdHtm|16892-13.0258,98,120,157MQVWKMETYYLWPILTVLTI
157MTH2374in1|ali|phd|phdHtm|132140-4.0431,554,890,1315VNYDKSQGGENMKRFLLIAL
158MTH6954in1|ali|phd|phdHtm|37093-11.8837,263,316,351MRFITLVLKNPFRSRARSLL
159MTH8484in1|ali|phd|phdHtm|25794-12.70120,160,213,242LRYFSLSSMDSTRVVDLKGG
160MTH904in1|ali|phd|phdHtm|13096-20.0049,71,103,125VDIYLIIILILGSGRSMFEI
161MTH9344in1|ali|phd|phdHtm|14974-7.9541,78,105,137VKMKNKALVEFLGDKEFRNS
162MTH4524out16|ali|phd|phdHtm|184111.7558,109,136,165LLFRFRDFTTADLAFTGLII
163MTH7984out8|ali|phd|phdHtm|186767.1951,77,138,169MHPTLLGPDLSVLYFFNSVL
164MTH15464out2|ali|phd|phdHtm|254010.9840,62,114,235VARFSQILLQSWVSGVARGS
165MTH284out2|ali|phd|phdHtm|188868.7945,122,145,176MVLEIVYGALNAVFGPFIAM
166MTH8134out2|ali|phd|phdHtm|165676.4642,91,113,154MKGGESVSDTKIPGLISLIL
167MTH9804out2|ali|phd|phdHtm|313838.9777,235,276,304MAVVPSALKPMSDALENIIP
168MTH1124out1|ali|phd|phdHtm|164222.9434,110,132,157VNYRNIMKHSLKTGLSFGLT
169MTH1744out1|ali|phd|phdHtm|7859022.6722,52,84,110MNPMAIISITAFVVALVSGV
170MTH18304out1|ali|phd|phdHtm|248414.6226,65,89,111MTPLLTVETILIIIVTVMVA
171MTH3404out1|ali|phd|phdHtm|400202.4985,140,237,322LVKFLVLGVNKDNKGNEALV
172MTH3504out1|ali|phd|phdHtm|196909.2330,73,95,141VKLRTHVTAAVVLFLLINFL
173MTH4834out1|ali|phd|phdHtm|201969.5045,86,121,144MNECPENSSWKLKLLTSIRI
174MTH8814out1|ali|phd|phdHtm|168484.4945,92,114,156MNILQNGEMMLKKGMGLLSV
175MTH9304out1|ali|phd|phdHtm|164515.8065,87,114,151MKINKIHTLTALITLMGLFA

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